BAC Information

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BAC

Clone NameB6Ng01-229K07
Chromosome8 (Build37)
Map Location 54,208,437 - 54,209,094
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040220, LOC623935, 1190028D05Rik, LOC676688
Downstream geneAga, Neil3, LOC100040107, Vegfc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229K07.bB6Ng01-229K07.g
ACCGA042727GA042728
length1,225658
definitionB6Ng01-229K07.b B6Ng01-229K07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaatttgtcaacttgatgcctaaattatctgtgtaaagccaca
acctttcctttctagttcattcctaagtttacacattaatgtatacatca
caatataaaacattttagaaaagcccaacaatctgaacaagttaaattct
caattattcagtctcttacaaaaatcaaagattcttttaacattgaaagt
ctctcacctatgacttcctatgaaataataaataagttaaatactttgtt
acttcaagagggaataatcagggcatagtcacaatcattcaaagcaaaat
caaactcaaagagtgtaaatcaccaaatgcccaatatctgggattcactc
aggatttttatgtctttattaagattctggatcacttctcctgctctgcc
atctgcaaaacacatacagcttaccttctcggctcagatcaacaccactc
cagtgctgctgctgttcttggtggtcttcccatggtacctggtatctcca
aaatgctcagatctattgaggcactgtcaccaatagcctctcctaggcct
tcctcatggtgcaaagcatcaactttctacatggtttgtctcttcaaacc
tgggccttggactgccattctggcagcactttctccaggagggaacacct
accatgtcacgaagatgaattatgaccattggagttcagaccacagctcg
actggataccagcctgcaattctcgcatatgtatatactttaagaagttt
ctattaagtttcaatattaccctcaaatatcccttatttttgctgtctct
ccctacattctcttcctcaatcctctttcccctccaactccacagttgat
tttcctgttcccagagggcataaattgatctccttaggaatgaaaatgga
atatatgctgctctcttcttatcactgctgatgtctcacttccaattgac
cagcatcaatttttcccactaatgcaaatgttttccttcagagattctgg
tattttgtgatcacagttgattctaatagttcacagctaccagactacag
attctgactttaaaatagccttgaaagatttatcaaggatattcacttcc
ctctctggactcacaagcctgggcctccaattgctggttgaggttgctct
ttaacaccacgtgtgccaatggaatttagttacgttttggctcctaagag
gtgacatcaggttcaacggtttgca
gaattccagtgaatggggtgctattttcatttgctaactgctgggagttg
gagggtcagatgtgtttaaaggtgtagcccttggtaagtcaactatgtgc
taaggatgcctcacttccaagagtagttagataatacaaaatgtactcaa
tggaaagaaacaagaaggaaaaaaatcacacctttgtgccatcataagga
cttggtctcttgttctatttaaaacggagactaataaaccatgccagtag
agaaatccatgacttttattaaaaaatattacattagctgcaattgatga
ctatggcatgtgatgcagtgggagaatgttagaaaatgctacaattatcc
ttatatatggtaattatagagataaacagggtattcagagaggaggtgct
tgaagttctgttggtctaaaagtaactctagaataaatggattctaagtt
ttgccttatataattagggaatctaagttgatgtctactgagatgaagag
ctacagatagatttgctttcatttctttgcttggcttttagtggaaagga
tctcggaaatccaatttagtctgttatgttaaagttgtcacttggttttc
ctcagactgagaagccaaatacgaagacagggatgcattttttttggggg
gggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_54208437_54209094
seq2: B6Ng01-229K07.g_67_724 (reverse)

seq1  CCCCCCCCCCCCCAAAAAAAATGCATCCCTGTCTTCGTATTTGGCTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCAAAAAAAATGCATCCCTGTCTTCGTATTTGGCTTCTC  50

seq1  AGTCTGAGGAAAACCAAGTGACAACTTTAACATAACAGACTAAATTGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAGGAAAACCAAGTGACAACTTTAACATAACAGACTAAATTGGAT  100

seq1  TTCCGAGATCCTTTCCACTAAAAGCCAAGCAAAGAAATGAAAGCAAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGAGATCCTTTCCACTAAAAGCCAAGCAAAGAAATGAAAGCAAATCT  150

seq1  ATCTGTAGCTCTTCATCTCAGTAGACATCAACTTAGATTCCCTAATTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAGCTCTTCATCTCAGTAGACATCAACTTAGATTCCCTAATTATA  200

seq1  TAAGGCAAAACTTAGAATCCATTTATTCTAGAGTTACTTTTAGACCAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAAAACTTAGAATCCATTTATTCTAGAGTTACTTTTAGACCAACA  250

seq1  GAACTTCAAGCACCTCCTCTCTGAATACCCTGTTTATCTCTATAATTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCAAGCACCTCCTCTCTGAATACCCTGTTTATCTCTATAATTACC  300

seq1  ATATATAAGGATAATTGTAGCATTTTCTAACATTCTCCCACTGCATCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAGGATAATTGTAGCATTTTCTAACATTCTCCCACTGCATCACA  350

seq1  TGCCATAGTCATCAATTGCAGCTAATGTAATATTTTTTAATAAAAGTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATAGTCATCAATTGCAGCTAATGTAATATTTTTTAATAAAAGTCAT  400

seq1  GGATTTCTCTACTGGCATGGTTTATTAGTCTCCGTTTTAAATAGAACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTCTACTGGCATGGTTTATTAGTCTCCGTTTTAAATAGAACAAG  450

seq1  AGACCAAGTCCTTATGATGGCACAAAGGTGTGATTTTTTTCCTTCTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAAGTCCTTATGATGGCACAAAGGTGTGATTTTTTTCCTTCTTGTT  500

seq1  TCTTTCCATTGAGTACATTTTGTATTATCTAACTACTCTTGGAAGTGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCATTGAGTACATTTTGTATTATCTAACTACTCTTGGAAGTGAGG  550

seq1  CATCCTTAGCACATAGTTGACTTACCAAGGGCTACACCTTTAAACACATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTAGCACATAGTTGACTTACCAAGGGCTACACCTTTAAACACATC  600

seq1  TGACCCTCCAACTCCCAGCAGTTAGCAAATGAAAATAGCACCCCATTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTCCAACTCCCAGCAGTTAGCAAATGAAAATAGCACCCCATTCAC  650

seq1  TGGAATTC  658
      ||||||||
seq2  TGGAATTC  658