BAC Information

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BAC

Clone NameB6Ng01-229L05
Chromosome8 (Build37)
Map Location 31,906,783 - 31,907,781
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628189
Downstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229L05.bB6Ng01-229L05.g
ACCGA042760GA042761
length1,080998
definitionB6Ng01-229L05.b B6Ng01-229L05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcaacatgtagccattcagtttgaccagaaccatttgttgttg
agaccatcttttccccactgtgtatttctggcttctttataaaaaagtag
gtgtctgtaggtttgtggatttatgttaagggtcttcaagttgattctat
ttatcagtgactctgtttttatgccaacacaatgctattgttattactgt
agttctgtatacaagttgaagttgggactggtgacaacttccagcagttc
ttttatttttcagaattattttcgctattctgttttgtttgcatgtgtgt
gtgtttccatatggtgaagattgtctttttaagttctgtgaaaaattgtg
ttggaattttgatgaggtttgcatctaatgtgtagattgcttttggtagg
atggccaaagatgcatatctttcagtcttctgagatcttgtctttcactt
atctatctatctatctatctatctatctatctatctatctatctatctat
ctatctatctatctacctatttatttatttatttatttatttatttattt
atttatttatttatttatttatttatttattgaagctagttgcaaatgtt
attatttccctgatttctttctcaatctatttgtcatttgtatatatttt
gttacatgttttaattttgtatccagctgatttgctgaaagtgtttaaca
gctgtaggagtttcctggtgggatttgtagggtcactttatgtatacaat
catattaatctgcaaataaagacacttcaactttttttctttcctattca
tatcccccaatctccttcttattgcttgtcctattgctctagttaaggca
tcaagtacttttcttgaatgaagaaagtattacagtgtattgttctgatt
tggtgggatatacttgatgctctccatttaggtgaatttggatatatgct
cgtgtatatgcttaataggtgatgtatggcttataggcctagtcctctag
ctcacttataatgatcaacattggaatttatctgagatttttctaatcta
agagatgaacatgtgggtttgtgtatttcc
gaattctgaatgcagatgcatcataatttatttaaccaactccctatgat
ctgacatttagagtgtttttcattgttgatttttataagaatgctgtgat
aaccatcatcaaacataaatctttaatctctgattactgcctgaagataa
actcccagccatgggattactgggtcaaaaatatgaatgtatttaagttt
ttttctaatatatttgccaatttactctccaagaggtttctgcagtttac
aggctcatgatccgtaaagaaggatgaccaagaatacaaaatgcttgcta
tagctataaaatgtcccaggcccatactaaaacagaactgcattgtttta
attagcaggccacccaaaagcctattgttttttcatgtaagattcattct
aagtagtagtgtaggagataatataggatacttggattcaggcaaattct
attattgagtgtcgtatttcaaacactgataataggaagtaatcaaaact
attgttttaggcaagaaattataaaaagtatattcacttaagatttaggg
tcctcagattctgtcactggaaatatatcttgtgtgaataaaaatataaa
aaatatttattattttaatttgctgaaaatattccatagctcaatttata
gaaccaaatcttgctcaacaaatgagacacatctgtcttcatgtaaacaa
acaaagccaacttcaaggcaacaccatgagattcatttcttttctcaatt
gctatagatggcagaggcaaatccagggccaataatcacattttcaagta
gagaaaatcaatccagagatgtaaactgacttcagtaaaatcagtgacta
gtataatactacaaagctactgattatgtttagtgtgcaaatataaaata
taaatataaaagtataaatatgtttagtgtataaatgttttctatataca
gatagataatacatgggatatatatgtgtgtatgtatgtatgtatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_31906783_31907781
seq2: B6Ng01-229L05.g_71_1068

seq1  GAATTCTGAATGCAGATGCATCATAATTTATTTAACCAACTCCCTATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATGCAGATGCATCATAATTTATTTAACCAACTCCCTATGAT  50

seq1  CTGACATTTAGAGTGTTTTTCATTGTTGATTTTTATAAGAATGCTGTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATTTAGAGTGTTTTTCATTGTTGATTTTTATAAGAATGCTGTGAT  100

seq1  AACCATCATCAAACATAAATCTTTAATCTCTGATTACTGCCTGAAGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCATCAAACATAAATCTTTAATCTCTGATTACTGCCTGAAGATAA  150

seq1  ACTCCCAGCCATGGGATTACTGGGTCAAAAATATGAATGTATTTAAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCAGCCATGGGATTACTGGGTCAAAAATATGAATGTATTTAAGTTT  200

seq1  TTTTCTAATATATTTGCCAATTTACTCTCCAAGAGGTTTCTGCAGTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAATATATTTGCCAATTTACTCTCCAAGAGGTTTCTGCAGTTTAC  250

seq1  AGGCTCATGATCCGTAAAGAAGGATGACCAAGAATACAAAATGCTTGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCATGATCCGTAAAGAAGGATGACCAAGAATACAAAATGCTTGCTA  300

seq1  TAGCTATAAAATGTCCCAGGCCCATACTAAAACAGAACTGCATTGTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATAAAATGTCCCAGGCCCATACTAAAACAGAACTGCATTGTTTTA  350

seq1  ATTAGCAGGCCACCCAAAAGCCTATTGTTTTTTCATGTAAGATTCATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCAGGCCACCCAAAAGCCTATTGTTTTTTCATGTAAGATTCATTCT  400

seq1  AAGTAGTAGTGTAGGAGATAATATAGGATACTTGGATTCAGGCAAATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTAGTGTAGGAGATAATATAGGATACTTGGATTCAGGCAAATTCT  450

seq1  ATTATTGAGTGTCGTATTTCAAACACTGATAATAGGAAGTAATCAAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGAGTGTCGTATTTCAAACACTGATAATAGGAAGTAATCAAAACT  500

seq1  ATTGTTTTAGGCAAGAAATTATAAAAAGTATATTCACTTAAGATTTAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTAGGCAAGAAATTATAAAAAGTATATTCACTTAAGATTTAGGG  550

seq1  TCCTCAGATTCTGTCACTGGAAATATATCTTGTGTGAATAAAAATATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGATTCTGTCACTGGAAATATATCTTGTGTGAATAAAAATATAAA  600

seq1  AAATATTTATTATTTTAATTTGCTGAAAATATTCCATAGCTCAATTTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTATTATTTTAATTTGCTGAAAATATTCCATAGCTCAATTTATA  650

seq1  GAACCAAATCTTGCTCAACAAATGAGACACATCTGTCTTCATGTAAACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAAATCTTGCTCAACAAATGAGACACATCTGTCTTCATGTAAACAA  700

seq1  ACAAAGCCAACTTCAAGGCAACACCATGAGATTCATTTCTTTTCTCAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCCAACTTCAAGGCAACACCATGAGATTCATTTCTTTTCTCAATT  750

seq1  GCTATAGATGGCAGAGGCAAATCCAGGGCCAATAATCACATTTTCAAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAGATGGCAGAGGCAAATCCAGGGCCAATAATCACATTTTCAAGTA  800

seq1  GAGAAAATCAATCCAGAGATGTAAACTGACTTCAGTAAAATCAGTGACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATCAATCCAGAGATGTAAACTGACTTCAGTAAAATCAGTGACTA  850

seq1  GTATAATACTACAAAGCTACTGATTATGTTTAGTGTGCAAATATAAAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATACTACAAAGCTACTGATTATGTTTAGTGTGCAAATATAAAATA  900

seq1  TAAATATAAAAAGTATAAATATGTTTAGTGTATAAATGTTTTCTATATAC  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAT-AAAAGTATAAATATGTTTAGTGTATAAATGTTTTCTATATAC  949

seq1  AGATAGATACATACAT-GGATATATATGTGTGTATGTATGTATGTATATA  999
      ||||||||| |||||| |||||||||||||||||||||||||||||||||
seq2  AGATAGATA-ATACATGGGATATATATGTGTGTATGTATGTATGTATATA  998