BAC Information

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BAC

Clone NameB6Ng01-232G04
Chromosome8 (Build37)
Map Location 68,088,921 - 68,089,799
singlet/doubletsinglet
Overlap genenone
Upstream geneCpe, Sc4mol, Klhl2, LOC100040903, LOC619647, 3110005G23Rik, Trim75, Trim60, LOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967
Downstream geneMarch1, LOC100040986, 1810029B16Rik, Tktl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232G04.bB6Ng01-232G04.g
ACCGA044737GA044738
length9811,172
definitionB6Ng01-232G04.b B6Ng01-232G04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacatacaacagcctttgttgtgcaaatattgctccccacatt
aattaatcaataaaaggctaatgtctggcctgtgattaggcaggctgtga
ttagatgcagggaggtgggttttaggctagggatcacaggtagagacagg
gaagaagtaaggagaccaagggagagaggaagagaaggcctctatgagag
gaaatgggccatgagcatgtgacatggagaaacagcaagtaacaagggat
gtatggctgggatgtaagttaaaatagctctaaaacctacccaatctggg
cttatgccttgtaaataaaatacctggattgtgtatgtattttgtatggg
ttagcgaaaatatataatttattttacagacatccatgggctggtggact
ggggttctataaataggctgagcaagccatgaggaaaaagctaggaagaa
gcaccactccattgcctcagcatcctgccatgtgtattcctgtcctgact
tccttcaatgatgagcagctatagctatatggatgtataaacagaataaa
tcctttcctctctaacttgcattttggtcatgacattttgttgcatgaag
acagaaatgtcattgttctgtattttaacttctctagattcttccttcgt
taaaaagctgaaaggctggcatcaagtgacctgaaaagccttatgtatag
gaagagagtaccttgctatcaagcagaaacaacaaagatggaaatttcac
taactgaatcagttagagagtaaaagaacatgtgcataagatgtttaaaa
gagttcaaacatcccttttccaagagtgtccaaatagtgcaagataatta
tggatgataaaccttcatgtacatagccagccttcttggcatgactctta
acacaatgagctagagaaatatatgagtttccagttccaagaagctatta
caacaagtgcaagatgcagtatatcttatga

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaacgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatcccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tggagagctagagaaagtatccaaggagctaaagggatcttcaacctata
ggtgaaaacatatgactacagtaccctgagctctgactctagctgcatat
gtatcaaagatgctagtcgcatcacttgaaagagaggccatggaacgcga
cttgtgtgccgctccgatcgcaggctaacgggcatgagtggctaggtatc
tctcctcgtcatgctcgcttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68088921_68089799
seq2: B6Ng01-232G04.b_42_920 (reverse)

seq1  TGGCTATGTACATGAAGGTTTATCATCCATAATTATCTTGCACTATTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATGTACATGAAGGTTTATCATCCATAATTATCTTGCACTATTTGG  50

seq1  ACACTCTTGGAAAAGGGATGTTTGAACTCTTTTAAACATCTTATGCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTTGGAAAAGGGATGTTTGAACTCTTTTAAACATCTTATGCACAT  100

seq1  GTTCTTTTACTCTCTAACTGATTCAGTTAGTGAAATTTCCATCTTTGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTTACTCTCTAACTGATTCAGTTAGTGAAATTTCCATCTTTGTTG  150

seq1  TTTCTGCTTGATAGCAAGGTACTCTCTTCCTATACATAAGGCTTTTCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTTGATAGCAAGGTACTCTCTTCCTATACATAAGGCTTTTCAGG  200

seq1  TCACTTGATGCCAGCCTTTCAGCTTTTTAACGAAGGAAGAATCTAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGATGCCAGCCTTTCAGCTTTTTAACGAAGGAAGAATCTAGAGAA  250

seq1  GTTAAAATACAGAACAATGACATTTCTGTCTTCATGCAACAAAATGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAATACAGAACAATGACATTTCTGTCTTCATGCAACAAAATGTCAT  300

seq1  GACCAAAATGCAAGTTAGAGAGGAAAGGATTTATTCTGTTTATACATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAAATGCAAGTTAGAGAGGAAAGGATTTATTCTGTTTATACATCCA  350

seq1  TATAGCTATAGCTGCTCATCATTGAAGGAAGTCAGGACAGGAATACACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTATAGCTGCTCATCATTGAAGGAAGTCAGGACAGGAATACACAT  400

seq1  GGCAGGATGCTGAGGCAATGGAGTGGTGCTTCTTCCTAGCTTTTTCCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGATGCTGAGGCAATGGAGTGGTGCTTCTTCCTAGCTTTTTCCTCA  450

seq1  TGGCTTGCTCAGCCTATTTATAGAACCCCAGTCCACCAGCCCATGGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGCTCAGCCTATTTATAGAACCCCAGTCCACCAGCCCATGGATGT  500

seq1  CTGTAAAATAAATTATATATTTTCGCTAACCCATACAAAATACATACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAAATAAATTATATATTTTCGCTAACCCATACAAAATACATACACA  550

seq1  ATCCAGGTATTTTATTTACAAGGCATAAGCCCAGATTGGGTAGGTTTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGTATTTTATTTACAAGGCATAAGCCCAGATTGGGTAGGTTTTAG  600

seq1  AGCTATTTTAACTTACATCCCAGCCATACATCCCTTGTTACTTGCTGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTTTAACTTACATCCCAGCCATACATCCCTTGTTACTTGCTGTTT  650

seq1  CTCCATGTCACATGCTCATGGCCCATTTCCTCTCATAGAGGCCTTCTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGTCACATGCTCATGGCCCATTTCCTCTCATAGAGGCCTTCTCTT  700

seq1  CCTCTCTCCCTTGGTCTCCTTACTTCTTCCCTGTCTCTACCTGTGATCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTCCCTTGGTCTCCTTACTTCTTCCCTGTCTCTACCTGTGATCCC  750

seq1  TAGCCTAAAACCCACCTCCCTGCATCTAATCACAGCCTGCCTAATCACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTAAAACCCACCTCCCTGCATCTAATCACAGCCTGCCTAATCACAG  800

seq1  GCCAGACATTAGCCTTTTATTGATTAATTAATGTGGGGAGCAATATTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGACATTAGCCTTTTATTGATTAATTAATGTGGGGAGCAATATTTGC  850

seq1  ACAACAAAGGCTGTTGTATGTGAGAATTC  879
      |||||||||||||||||||||||||||||
seq2  ACAACAAAGGCTGTTGTATGTGAGAATTC  879


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