BAC Information

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BAC

Clone NameB6Ng01-232L02
Chromosome8 (Build37)
Map Location 130,092,700 - 130,231,144
singlet/doubletdoublet
Overlap genePard3
Upstream geneIrf2bp2, Tomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, EG628847
Downstream geneNrp1, LOC668494, Itgb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232L02.bB6Ng01-232L02.g
ACCGA044963GA044964
length1,098759
definitionB6Ng01-232L02.b B6Ng01-232L02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,230,050 - 130,231,144)(130,092,700 - 130,093,398)
sequence
gaattctttacaagagtaaactgtttctgagtatggtccacgcaggggaa
ctttgagcaatgaatccttgatggttatgcagagtcatttgcacctccct
ctccacacgtgagacgtcgctattcacccaggtcaagttctggctgctgc
aggtttaggtaatgtcccagggcaggtgactgctaagctgggcttcagac
tcaggtgagcccactattctctaaagctccacagcacgttcactatgtgg
atcctgccctttctctgcctaccaataagaagagaaaggtacagggggca
cagactcagacagcgtgagcaaacaccagatacaacgtttaaaaaaaaaa
atctgtaaaagtgaaggctgtaagggattgcagtagcagatcatggactg
ggggaggaccgcggggccgcggggagaggcaggcatctctagaactgaga
gcaaggaaggctgactagaagttgaataggagcccaaaggagtgatacac
tccaacgagccggcagcggattgcctagttaccagatgcttccattctct
tctcggcgcttgtgccaggccttggtgagtctggctcaaagcccctcaag
tgagaaaaactggaagcagctgacggccggtgcctgtgggcgctcagagc
agcccctctgttctggcaaagcgattcccctgacaggtggcaggaggaga
gcctgttcccaatccagccacactggagggtagacaagctaaaaggaaaa
acaagccccacgcctcagaacctccacatgctgtgagaagcagctgctga
ctcagagtgtgggaaggacaagagatgtctgcagccaggttcccaaggtg
gcagagtctcatctaggcagagctctagtttctaggaatggtctggatgg
tgaccctaagcaatgtggttgggaaatctcctgtgatcaatcgctcagca
cacattttccttgtcttggacattgtatccatcctgggcatgcccaacag
cccacaatgagtggtttgagcaactggctattgctgaaagcctccagacg
ggacggagacagggccagtgtaatgcaacatggttgcttcttacctat
gaattcagtttaaaccttttcacagaacaggagcattcaggatccagtgc
aggcctttccatgatgcattcacataagccttttcatagcatagttggat
ttgggattcagcacaggcttttccaatgttgtgttcacactcaagggctg
atgctttgttctcccctgtttccacggaaagactgccagcagaaataaat
ggagtgggatactcttctgtttatcacctcttttgctttagcttaggtat
ttatagtaaaaaagattaattatgtagaagccatttctttctattgattt
gaaagcagagattcagaggtttaataaactcccgggaatggtggtgtggg
tctaaagaaaaagggcatgcaagtagcccagggtccaatttgagtgaaga
ctacctaccccgggggaggctgctgcctcccctgccagaggcggctagga
acaattagccttgccccgcccatcctccttgtgcccaaaatgaacctagt
ggggttgggggggggaaactccccccagacaaaaaccttgggtctgagcc
ccttcccaccacccctggagtttttgcgtcacggggaaccccccccaaaa
acttaaacccccccttggcccagggggaaccccctgcggttcactgcctt
catgcctaaagggacccactctggccctgaaaggggaaacccattttgcc
cccccccaaaggcatatggggaaggttgtctggtggtttttccaaagtcc
agggatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_130230050_130231144
seq2: B6Ng01-232L02.b_49_1146 (reverse)

seq1  ATAGGTAAGAAAGCACACCATGTTGCATTTACACTGGCCCCTGTCTCCCG  50
      ||||||||| ||||| ||||||||||| ||||||||| |||||||| |||
seq2  ATAGGTAAG-AAGCA-ACCATGTTGCA-TTACACTGG-CCCTGTCT-CCG  45

seq1  TCCCCTTCTGAG--CTTCAGC-ATAGCCCAGTTGCTCAACCACCTCA-TG  96
      |||| |   |||   |||||| |||| |||||||||||| |  |||| ||
seq2  TCCCGTCTGGAGGCTTTCAGCAATAG-CCAGTTGCTCAAACCACTCATTG  94

seq1  TGGGCTG-TGGGCATGCCCAGGATGGATACAATGTCC-AGACAAGG-AAA  143
      ||||||| ||||||||||||||||||||||||||||| |||||||| |||
seq2  TGGGCTGTTGGGCATGCCCAGGATGGATACAATGTCCAAGACAAGGAAAA  144

seq1  TGTGTGCTGAGCGATTGATCACA-GAGATTT-CCAACCACATTGCTTA-G  190
      ||||||||||||||||||||||| ||||||| |||||||||||||||| |
seq2  TGTGTGCTGAGCGATTGATCACAGGAGATTTCCCAACCACATTGCTTAGG  194

seq1  GTCACCATCCAGACCATTCCTAGAAACTAGAGCTCTGCCTAGATGGAGAC  240
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTCACCATCCAGACCATTCCTAGAAACTAGAGCTCTGCCTAGAT-GAGAC  243

seq1  TCTGCCACCTTGGGAACCTGGCTGCAGACATCTCTTGTCCTTCCCACACT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCACCTTGGGAACCTGGCTGCAGACATCTCTTGTCCTTCCCACACT  293

seq1  CTGAGTCAGCAGCTGCTTCTCACAGCATGTGGAGGTTCTGAGGCGTGGGG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCAGCAGCTGCTTCTCACAGCATGTGGAGGTTCTGAGGCGTGGGG  343

seq1  CTTGTTTTTCCTTTTAGCTTGTCTACCCTCCAGTGTGGCTGGATTGGGAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTTCCTTTTAGCTTGTCTACCCTCCAGTGTGGCTGGATTGGGAA  393

seq1  CAGGCTCTCCTCCTGCCACCTGTCAGGGGAATCGCTTTGCCAGAACAGAG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCTCCTCCTGCCACCTGTCAGGGGAATCGCTTTGCCAGAACAGAG  443

seq1  GGGCTGCTCTGAGCGCCCACAGGCACCGGCCGTCAGCTGCTTCCAGTTTT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCTCTGAGCGCCCACAGGCACCGGCCGTCAGCTGCTTCCAGTTTT  493

seq1  TCTCACTTGAGGGGCTTTGAGCCAGACTCACCAAGGCCTGGCACAAGCGC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTTGAGGGGCTTTGAGCCAGACTCACCAAGGCCTGGCACAAGCGC  543

seq1  CGAGAAGAGAATGGAAGCATCTGGTAACTAGGCAATCCGCTGCCGGCTCG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAAGAGAATGGAAGCATCTGGTAACTAGGCAATCCGCTGCCGGCTCG  593

seq1  TTGGAGTGTATCACTCCTTTGGGCTCCTATTCAACTTCTAGTCAGCCTTC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTGTATCACTCCTTTGGGCTCCTATTCAACTTCTAGTCAGCCTTC  643

seq1  CTTGCTCTCAGTTCTAGAGATGCCTGCCTCTCCCCGCGGCCCCGCGGTCC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCTCAGTTCTAGAGATGCCTGCCTCTCCCCGCGGCCCCGCGGTCC  693

seq1  TCCCCCAGTCCATGATCTGCTACTGCAATCCCTTACAGCCTTCACTTTTA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCAGTCCATGATCTGCTACTGCAATCCCTTACAGCCTTCACTTTTA  743

seq1  CAGATTTTTTTTTTTAAACGTTGTATCTGGTGTTTGCTCACGCTGTCTGA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTTTTTTTTTAAACGTTGTATCTGGTGTTTGCTCACGCTGTCTGA  793

seq1  GTCTGTGCCCCCTGTACCTTTCTCTTCTTATTGGTAGGCAGAGAAAGGGC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGCCCCCTGTACCTTTCTCTTCTTATTGGTAGGCAGAGAAAGGGC  843

seq1  AGGATCCACATAGTGAACGTGCTGTGGAGCTTTAGAGAATAGTGGGCTCA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCACATAGTGAACGTGCTGTGGAGCTTTAGAGAATAGTGGGCTCA  893

seq1  CCTGAGTCTGAAGCCCAGCTTAGCAGTCACCTGCCCTGGGACATTACCTA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTCTGAAGCCCAGCTTAGCAGTCACCTGCCCTGGGACATTACCTA  943

seq1  AACCTGCAGCAGCCAGAACTTGACCTGGGTGAATAGCGACGTCTCACGTG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCAGCAGCCAGAACTTGACCTGGGTGAATAGCGACGTCTCACGTG  993

seq1  TGGAGAGGGAGGTGCAAATGACTCTGCATAACCATCAAGGATTCATTGCT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGGGAGGTGCAAATGACTCTGCATAACCATCAAGGATTCATTGCT  1043

seq1  CAAAGTTCCCCTGCGTGGACCATACTCAGAAACAGTTTACTCTTGTAAAG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTCCCCTGCGTGGACCATACTCAGAAACAGTTTACTCTTGTAAAG  1093

seq1  AATTC  1095
      |||||
seq2  AATTC  1098

seq1: chr8_130092700_130093398
seq2: B6Ng01-232L02.g_69_827

seq1  GAATTCAGTTTAAACCTTTTCACAGAACAGGAGCATTCAGGATCCAGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTAAACCTTTTCACAGAACAGGAGCATTCAGGATCCAGTGC  50

seq1  AGGCCTTTCCATGATGCATTCACATAAGCCTTTTCATAGCATAGTTGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTTCCATGATGCATTCACATAAGCCTTTTCATAGCATAGTTGGAT  100

seq1  TTGGGATTCAGCACAGGCTTTTCCAATGTTGTGTTCACACTCAAGGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATTCAGCACAGGCTTTTCCAATGTTGTGTTCACACTCAAGGGCTG  150

seq1  ATGCTTTGTTCTCCCCTGTTTCCACGGAAAGACTGCCAGCAGAAATAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTGTTCTCCCCTGTTTCCACGGAAAGACTGCCAGCAGAAATAAAT  200

seq1  GGAGTGGGATACTCTTCTG-TTATCACCTC-TTTGCTTTAGCTTAGGTAT  248
      ||||||||||||||||||| |||||||||| |||||||||||||||||||
seq2  GGAGTGGGATACTCTTCTGTTTATCACCTCTTTTGCTTTAGCTTAGGTAT  250

seq1  TTATAGT-AAAAAGATTAATTATGTAGAAGCCA-TTCTTTCTATTGATTT  296
      ||||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  TTATAGTAAAAAAGATTAATTATGTAGAAGCCATTTCTTTCTATTGATTT  300

seq1  G-AAGCAGAGATTCAGAGGTTTAATAAACTCC--GGGATGGTGGTGT-GG  342
      | ||||||||||||||||||||||||||||||  || |||||||||| ||
seq2  GAAAGCAGAGATTCAGAGGTTTAATAAACTCCCGGGAATGGTGGTGTGGG  350

seq1  TCTAATG-AGAAGGGCATGCAAGTAG-CCAGGGT-CTAGTTGAGTG-AGA  388
      ||||| | | |||||||||||||||| ||||||| | | ||||||| |||
seq2  TCTAAAGAAAAAGGGCATGCAAGTAGCCCAGGGTCCAATTTGAGTGAAGA  400

seq1  CTA-CTACCC--TGGGAGGCTGCTGC--TCCCTG-CAAAGTC-TCTAGG-  430
      ||| ||||||   |||||||||||||   ||||| || || |  ||||| 
seq2  CTACCTACCCCGGGGGAGGCTGCTGCCTCCCCTGCCAGAGGCGGCTAGGA  450

seq1  ACCATTAGCCATGTTCAG-CCATCCTC--TGTGCCAAGAATG-AGCTAGT  476
      || ||||||| ||  | | ||||||||  |||||| | |||| | |||||
seq2  ACAATTAGCCTTGCCCCGCCCATCCTCCTTGTGCCCAAAATGAACCTAGT  500

seq1  --GGCTGGAGTGGG--AACT--CTCCAGAC--AAAGCTT-GGTCTGAGCT  517
        || ||| | |||  ||||  | ||||||  ||| ||| ||||||||| 
seq2  GGGGTTGGGGGGGGGAAACTCCCCCCAGACAAAAACCTTGGGTCTGAGCC  550

seq1  CAT--CCATCACCTCT-GAG-TTTTGC-TCACGGG--AGCACCCGC-AAC  559
      | |  ||| |||| || ||| |||||| |||||||  | | ||| | || 
seq2  CCTTCCCACCACCCCTGGAGTTTTTGCGTCACGGGGAACCCCCCCCAAAA  600

seq1  ACTTAA--CTCTCCTT-GCTCA--GTGTAGACGCTGCAGTT--CCAACTT  602
      ||||||  | | |||| || ||  | | |  | |||| |||  |   |||
seq2  ACTTAAACCCCCCCTTGGCCCAGGGGGAACCCCCTGCGGTTCACTGCCTT  650

seq1  CAAACTTGAAGTGACTCA-TCTGG-TCTGACTGGG--AACC--ATCTGTC  646
      ||  | | ||| ||| || |||||  ||||  |||  ||||   | || |
seq2  CATGCCTAAAGGGACCCACTCTGGCCCTGAAAGGGGAAACCCATTTTGCC  700

seq1  CCAGCGCAGAGGC-TATGTG--ATGTTGTCTGTTG--TTTTCC-AAGTCC  690
      ||  | || |||| |||| |  | |||||||| ||  |||||| ||||||
seq2  CCCCCCCAAAGGCATATGGGGAAGGTTGTCTGGTGGTTTTTCCAAAGTCC  750

seq1  AGGGATTTG  699
      |||||||||
seq2  AGGGATTTG  759