BAC Information

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BAC

Clone NameB6Ng01-234M11
Chromosome8 (Build37)
Map Location 96,158,114 - 96,158,656
singlet/doubletsinglet
Overlap genenone
Upstream geneIrx6, LOC100041325, Mmp2, Aytl1, Capns2, LOC100040752, Slc6a2, EG244595, LOC382044, Es1, LOC676523, Ces3, Es22, AU018778, Ces1, 2310039D24Rik, Ces7
Downstream geneGnao1, Amfr, Nudt21, Ogfod1, Bbs2, Mt4, Mt3, Mt2, Mt1, Nup93, LOC100041555, Slc12a3, Herpud1, EG434339, AI451557, Cpne2, 2310065K24Rik, Rspry1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234M11.bB6Ng01-234M11.g
ACCGA046445GA046446
length7241,181
definitionB6Ng01-234M11.b B6Ng01-234M11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctgacaaatggagattctccacagatacctaaaagttactag
aaattatcagggcccaggaagtaggggggttgcggtattgcagtattcat
gagaaggtctgctaaagtagaacccctggtggtgggcttaacaatagact
agctttatacctggctcccttcttagtggcagcagcctggtccccgcctt
cttttgatgtatactttccttttgtattgtgtcacttggtggattgtgtc
ttgtctgctttcttgctatttttctgtataaaaagtttgagactcaactt
gacaaaatacagtcagattctacacaacctcctgtgtgcatctgtctgtc
attcccgccaactccttgcccatctgcacccagagacccgtccatccaga
caaagggacccagagggcatgcggcagtctcagaggatccttgggtacca
tgtatgcacacagcacacagacatgcacaggcaaaacacccatacatatg
aaaataaacaaaacaaccttttgaggcagggtctttctatgttgctcagg
ctgtcctgaaactcactaagcaggctggcttcaaactcacagggattcct
ttgcctctacctccaaagttctaaaatttaaggcatgtatcaccatacct
catccagaaaaaataaaatgagaaatggggagggggcttaggaggaaatt
gggggtgagcggatatgggaggca
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaacggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagaaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggca
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaatattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaagacagcattttcaacaaatggtgctggc
acaactggttgtatcatgtagaagaatgcgaatcgatccatacttatctc
cttgtactaaggtcaaatctaaatgggatcaaagaactcacataaaacca
gaagaacactgaactatagaggagaaagtggggaaagtcttggaagattg
gcacaggaaactcctgacgacagccatggcctggcctgtaggatcgagaa
atttagacaatggggatccttatagttggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_96158114_96158656
seq2: B6Ng01-234M11.b_227_769 (reverse)

seq1  TGCCTCCCATATCCGCTCACCCCCAATTTCCTCCTAAGCCCCCTCCCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCATATCCGCTCACCCCCAATTTCCTCCTAAGCCCCCTCCCCAT  50

seq1  TTCTCATTTTATTTTTTCTGGATGAGGTATGGTGATACATGCCTTAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATTTTATTTTTTCTGGATGAGGTATGGTGATACATGCCTTAAATT  100

seq1  TTAGAACTTTGGAGGTAGAGGCAAAGGAATCCCTGTGAGTTTGAAGCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACTTTGGAGGTAGAGGCAAAGGAATCCCTGTGAGTTTGAAGCCAG  150

seq1  CCTGCTTAGTGAGTTTCAGGACAGCCTGAGCAACATAGAAAGACCCTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTAGTGAGTTTCAGGACAGCCTGAGCAACATAGAAAGACCCTGCC  200

seq1  TCAAAAGGTTGTTTTGTTTATTTTCATATGTATGGGTGTTTTGCCTGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGGTTGTTTTGTTTATTTTCATATGTATGGGTGTTTTGCCTGTGC  250

seq1  ATGTCTGTGTGCTGTGTGCATACATGGTACCCAAGGATCCTCTGAGACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTGTGCTGTGTGCATACATGGTACCCAAGGATCCTCTGAGACTG  300

seq1  CCGCATGCCCTCTGGGTCCCTTTGTCTGGATGGACGGGTCTCTGGGTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCATGCCCTCTGGGTCCCTTTGTCTGGATGGACGGGTCTCTGGGTGCA  350

seq1  GATGGGCAAGGAGTTGGCGGGAATGACAGACAGATGCACACAGGAGGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGCAAGGAGTTGGCGGGAATGACAGACAGATGCACACAGGAGGTTG  400

seq1  TGTAGAATCTGACTGTATTTTGTCAAGTTGAGTCTCAAACTTTTTATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAATCTGACTGTATTTTGTCAAGTTGAGTCTCAAACTTTTTATACA  450

seq1  GAAAAATAGCAAGAAAGCAGACAAGACACAATCCACCAAGTGACACAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATAGCAAGAAAGCAGACAAGACACAATCCACCAAGTGACACAATA  500

seq1  CAAAAGGAAAGTATACATCAAAAGAAGGCGGGGACCAGGCTGC  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGAAAGTATACATCAAAAGAAGGCGGGGACCAGGCTGC  543