BAC Information

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BAC

Clone NameB6Ng01-236O13
Chromosome8 (Build37)
Map Location 118,846,168 - 119,005,554
singlet/doubletdoublet
Overlap geneLOC384868
Upstream geneWwox, Maf
Downstream geneLOC668233, Dynlrb2, Cdyl2, LOC100043053, 2310061C15Rik, 2610510J17Rik, BC060631, 1700030J22Rik, Gcsh, Pkd1l2, Bcmo1, Gan, 4933407C03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236O13.bB6Ng01-236O13.g
ACCGA048010GA048011
length1,155318
definitionB6Ng01-236O13.b B6Ng01-236O13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,846,168 - 118,847,314)(119,005,238 - 119,005,554)
sequence
gaattcttggcttcctctaagcagacatgcttagcatctgctatgtttca
aagcgattgtgggacacatagagagctgatgtgtatacctccgttcctac
ttataaggtactctctggtgagcaaggatcactggctgcctcaagtttga
tattgcctatctttgggaaagcatagccttggtgcaagcacactccctct
cccacgtgactctgaggattcaatgagaaaagtcctctggaagggtttcc
tggaaagaacatggaaactccttttagtggctgcgtgactctatgggggc
ggggggataaaataaaagtcggcagattgatcgcctgaagtctcatcttg
gcaagaagaaaatgaatgcttcattaagagccttagagatggagacggaa
acgctatcagttcagtcaagagtgttacctccaagatgtttcctgataaa
agcaaattcacagatacagtgtaagaacaaagactcaaatccaaatcccg
tgtccctaagtccctgtacttcgccactacagggcatgatcttacatacc
tttgtcgtatttgtgtctgttgtaaaactcccaggtctatccaaggaaag
ccacacacgagtattagaatcgtgagcttagtcctttggccctggtctct
gagggacgttagctttctgtgactgattccacactgataatctgccctgg
aatgaactgcccctcactatccttcatacactcctccccacggcctaagt
gttttctgaaggtgggacccaagccctgagcaatctcaaataccctctga
ctagacctaggcttctcctcttcaactgacactcagagcattggtgggag
ccctgctatgattggatgcctgacttcttgcactgccttccagtaatggt
accgtatctctcctactccagttgtagcaacaagttcctctaggggttcc
taatgccacttggggaagagggcattgtcagctctcgtgaagattgacct
tacaggtgtgaatcagagctcagggcaggacattttttggagttacggtc
tcctttctggagaacaccttctgtctaaacagcctgcctcagatcctcag
gttatccaatatgatcccttaccagtccgtagtcacctctccgcccactg
ttcaa
tctctaatccttcctcactgtcagtgcacccagaattagttctgcagctc
tctttaaggaatgaaaggctccaagagaactgggcagggactcggtgtgt
ctctgccacccaatcagcatctggagcaggggaggttcgataatattcat
aaaggccaacaatatagatattaaattttgttctgttgattattaacttc
tgaactggaatcataaccctcccaaatccaaataatttttaagataaact
tttaagatattattattaatattataattgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtaggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_118846168_118847314
seq2: B6Ng01-236O13.b_47_1201

seq1  GAATTCTTGGCTTCCTCTAAGCAGACATGCTTAGCATCTGCTATGTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGCTTCCTCTAAGCAGACATGCTTAGCATCTGCTATGTTTCA  50

seq1  AAGCGATTGTGGGACACATAGAGAGCTGATGTGTATACCTCCGTTCCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGATTGTGGGACACATAGAGAGCTGATGTGTATACCTCCGTTCCTAC  100

seq1  TTATAAGGTACTCTCTGGTGAGCAAGGATCACTGGCTGCCTCAAGTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGGTACTCTCTGGTGAGCAAGGATCACTGGCTGCCTCAAGTTTGA  150

seq1  TATTGCCTATCTTTGGGAAAGCATAGCCTTGGTGCAAGCACACTCCCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCTATCTTTGGGAAAGCATAGCCTTGGTGCAAGCACACTCCCTCT  200

seq1  CCCACGTGACTCTGAGGATTCAATGAGAAAAGTCCTCTGGAAGGGTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGTGACTCTGAGGATTCAATGAGAAAAGTCCTCTGGAAGGGTTTCC  250

seq1  TGGAAAGAACATGGAAACTCCTTTTAGTGGCTGCGTGACTCTATGGGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGAACATGGAAACTCCTTTTAGTGGCTGCGTGACTCTATGGGGGC  300

seq1  GGGGGGATAAAATAAAAGTCGGCAGATTGATCGCCTGAAGTCTCATCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGATAAAATAAAAGTCGGCAGATTGATCGCCTGAAGTCTCATCTTG  350

seq1  GCAAGAAGAAAATGAATGCTTCATTAAGAGCCTTAGAGATGGAGACGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAAGAAAATGAATGCTTCATTAAGAGCCTTAGAGATGGAGACGGAA  400

seq1  ACGCTATCAGTTCAGTCAAGAGTGTTACCTCCAAGATGTTTCCTGATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTATCAGTTCAGTCAAGAGTGTTACCTCCAAGATGTTTCCTGATAAA  450

seq1  AGCAAATTCACAGATACAGTGTAAGAACAAAGACTCAAATCCAAATCCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATTCACAGATACAGTGTAAGAACAAAGACTCAAATCCAAATCCCG  500

seq1  TGTCCCTAAGTCCCTGTACTTCGCCACTACAGGGCATGATCTTACATACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTAAGTCCCTGTACTTCGCCACTACAGGGCATGATCTTACATACC  550

seq1  TTTGTCGTATTTGTGTCTGTTGTAAAACTCCCAGGTCTATCCAAGGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCGTATTTGTGTCTGTTGTAAAACTCCCAGGTCTATCCAAGGAAAG  600

seq1  CCACACACGAGTATTAGAATCGTGAGCTTAGTCCTTTGGCCCTGGTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACGAGTATTAGAATCGTGAGCTTAGTCCTTTGGCCCTGGTCTCT  650

seq1  GAGGGACGTTAGCTTTCTGTGACTGATTCCACACTGATAATCTGCCCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGACGTTAGCTTTCTGTGACTGATTCCACACTGATAATCTGCCCTGG  700

seq1  AATGAACTGCCCCTCACTATCCTTCATACACTCCTCCCCACGGCCTAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACTGCCCCTCACTATCCTTCATACACTCCTCCCCACGGCCTAAGT  750

seq1  GTTTTCTGAAGGTGGGACCCAAGCCCTGAGCAATCTCAAATACCCTCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTGAAGGTGGGACCCAAGCCCTGAGCAATCTCAAATACCCTCTGA  800

seq1  CTAGACCTAGGCTTCTCCTCTTCAACTGACACTCAGAGCATTGGTGGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACCTAGGCTTCTCCTCTTCAACTGACACTCAGAGCATTGGTGGGAG  850

seq1  CCCTGCTATGATTGGATGCCTGACTTCTTGCACTGCCTTCCAGTAATGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTATGATTGGATGCCTGACTTCTTGCACTGCCTTCCAGTAATGGT  900

seq1  ACCGTATCTCTCCTACTCCAGTTGTAGCAAACAAAGTTCCTCTAGGGGTT  950
      ||||||||||||||||||||||||||||||   |||||||||||||||||
seq2  ACCGTATCTCTCCTACTCCAGTTGTAGCAA--CAAGTTCCTCTAGGGGTT  948

seq1  CCTAATGCCACTTGGGGAAGAGGGCATTGTCAGCCCTCGTGAAGAATGA-  999
      |||||||||||||||||||||||||||||||||| |||||||||| ||| 
seq2  CCTAATGCCACTTGGGGAAGAGGGCATTGTCAGCTCTCGTGAAGATTGAC  998

seq1  CTTACAGGTGTGAATCAGAGCTCAGGGCAGGACATTTTTT-GAGTAACGG  1048
      |||||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  CTTACAGGTGTGAATCAGAGCTCAGGGCAGGACATTTTTTGGAGTTACGG  1048

seq1  TCTC--TTCTGGAGAACAC--TCTGTCTAAACCAGCTGCCCTCAGAAACT  1094
      ||||  |||||||||||||  |||||||||| ||||   |||||||  ||
seq2  TCTCCTTTCTGGAGAACACCTTCTGTCTAAA-CAGCCTGCCTCAGATCCT  1097

seq1  CAGGTTATCCATATTGATCCCT--ACAGTCCGTAGTCAC--CTCCG-CCA  1139
      |||||||||||   ||||||||   ||||||||||||||  ||||| |||
seq2  CAGGTTATCCAATATGATCCCTTACCAGTCCGTAGTCACCTCTCCGCCCA  1147

seq1  CTGTTCAA  1147
      ||||||||
seq2  CTGTTCAA  1155

seq1: chr8_119005238_119005554
seq2: B6Ng01-236O13.g_75_391 (reverse)

seq1  ACCCCTACACACACACACACACACACACACACACACACAATTATAATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTACACACACACACACACACACACACACACACACAATTATAATATT  50

seq1  AATAATAATATCTTAAAAGTTTATCTTAAAAATTATTTGGATTTGGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATATCTTAAAAGTTTATCTTAAAAATTATTTGGATTTGGGAGG  100

seq1  GTTATGATTCCAGTTCAGAAGTTAATAATCAACAGAACAAAATTTAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGATTCCAGTTCAGAAGTTAATAATCAACAGAACAAAATTTAATAT  150

seq1  CTATATTGTTGGCCTTTATGAATATTATCGAACCTCCCCTGCTCCAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTGTTGGCCTTTATGAATATTATCGAACCTCCCCTGCTCCAGATG  200

seq1  CTGATTGGGTGGCAGAGACACACCGAGTCCCTGCCCAGTTCTCTTGGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGGGTGGCAGAGACACACCGAGTCCCTGCCCAGTTCTCTTGGAGC  250

seq1  CTTTCATTCCTTAAAGAGAGCTGCAGAACTAATTCTGGGTGCACTGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATTCCTTAAAGAGAGCTGCAGAACTAATTCTGGGTGCACTGACAG  300

seq1  TGAGGAAGGATTAGAGA  317
      |||||||||||||||||
seq2  TGAGGAAGGATTAGAGA  317