BAC Information

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BAC

Clone NameB6Ng01-237L08
Chromosome8 (Build37)
Map Location 57,976,632 - 57,996,853
singlet/doubletdoublet
Overlap geneGm1153, EG664808, EG664818, EG664834, EG664859
Upstream geneGm392, LOC100040212
Downstream geneEG664876, LOC100040356, LOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237L08.bB6Ng01-237L08.g
ACCGA048592GA048593
length338453
definitionB6Ng01-237L08.b B6Ng01-237L08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,976,632 - 57,976,970)(57,996,395 - 57,996,853)
sequence
aaggcaaggtacagataaccctagacacagagaaacagaatcccatctaa
aaccctgaagtgcaaaggtgtggctgtgcacctggttctatgcacctgtg
tggacttccattggctacaaggttgtgggaagaagcagcaagaggcttgc
agcaaacaggtgcctccataagttttcctacaaaggaaaggactttgccc
taaggaggttcagtgggtggaggtcacatggctgggtggccattttgcag
tatgaggaaatgtacgaggagaacagattccatcctgttttgtttgttgg
tttacttagttggttttggtgttggtgttggtgttggt
attctcattggacatttgcctgcttctctggctaatgcctgtctctcttt
ttctcactatcaatgttttatctctcttttctctctctcctttacacact
atgtgtgattaaccaatactcactttacaattagtgggtatactgctggt
tttctccttggcttttgctgacaccaacatgtgacattgcttgcatccct
aggactctctaaagcatgctttaagtttaagtgccaatcgttctgagctc
ttaccctaatgagagacaatgtctgggaactttggatcagttttgttctc
aatcctataggcaagttatttctttctttctctctctctctctctctctc
tctctctctctctctctctgtctgtctctctctccctctctgcctctctg
tactcgtgtaactttccttttcttcatcacacacatagaaatatttgtac
cac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_57976632_57976970
seq2: B6Ng01-237L08.b_54_391

seq1  AAGGCAAGGTGCAGATAACCCTAGACACAGAGGCACAGAATCCCATCTAC  50
      |||||||||| |||||||||||||||||||||  ||||||||||||||| 
seq2  AAGGCAAGGTACAGATAACCCTAGACACAGAGAAACAGAATCCCATCTAA  50

seq1  AACCCTGAAATACAAAGGTGTGGCTGTGCACCTGGTTCTATGCACCTGTG  100
      ||||||||| | ||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGAAGTGCAAAGGTGTGGCTGTGCACCTGGTTCTATGCACCTGTG  100

seq1  TGGACTTCCATTGGCTACAAGGTTGTGGGAAGAAGCAGCAAGAGGCTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTCCATTGGCTACAAGGTTGTGGGAAGAAGCAGCAAGAGGCTTGC  150

seq1  AGCAAACAGGTGCCTCCAATAAGTTTTCCTACAAAGGAAAGGAATTTGCC  200
      ||||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  AGCAAACAGGTGCCTCC-ATAAGTTTTCCTACAAAGGAAAGGACTTTGCC  199

seq1  CTAAGGAGGTTCAGTGGGTGGAGGTCACATGGCCGGGTCGCCATTTTGCA  250
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  CTAAGGAGGTTCAGTGGGTGGAGGTCACATGGCTGGGTGGCCATTTTGCA  249

seq1  GTATGAGGAAATGTATGAGGAGAACAGATTCCATCCTGTTTTGTTTGTTG  300
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTATGAGGAAATGTACGAGGAGAACAGATTCCATCCTGTTTTGTTTGTTG  299

seq1  GTTTACTTAGTTGGTTTTGGTGTTGGTGTTGGTGTTGGT  339
      |||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTTAGTTGGTTTTGGTGTTGGTGTTGGTGTTGGT  338

seq1: chr8_57996395_57996853
seq2: B6Ng01-237L08.g_68_526 (reverse)

seq1  GTGGTACAAATATTTCTATGTGTGTGATGAAGAAAAGGAAAGTTACACGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTACAAATATTTCTATGTGTGTGATGAAGAAAAGGAAAGTTACACGA  50

seq1  GTACAGAGAGGCAGAGAGGGAGAGAGAGACAGACAGAGAGAGAGAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGAGAGGCAGAGAGGGAGAGAGAGACAGACAGAGAGAGAGAGAGAG  100

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAATAACTTGCCTATAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAATAACTTGCCTATAGG  150

seq1  ATTGAGAACAAAACTGATCCAAAGTTCCCAGACATTGTCTCTCATTAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAACAAAACTGATCCAAAGTTCCCAGACATTGTCTCTCATTAGGG  200

seq1  TAAGAGCTCAGAACGATTGGCACTTAAACTTAAAGCATGCTTTAGAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGCTCAGAACGATTGGCACTTAAACTTAAAGCATGCTTTAGAGAGT  250

seq1  CCTAGGGATGCAAGCAATGTCACATGTTGGTGTCAGCAAAAGCCAAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGGATGCAAGCAATGTCACATGTTGGTGTCAGCAAAAGCCAAGGAG  300

seq1  AAAACCAGCAGTATACCCACTAATTGTAAAGTGAGTATTGGTTAATCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGCAGTATACCCACTAATTGTAAAGTGAGTATTGGTTAATCACA  350

seq1  CATAGTGTGTAAAGGAGAGAGAGAAAAGAGAGATAAAACATTGATAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGTGTAAAGGAGAGAGAGAAAAGAGAGATAAAACATTGATAGTGA  400

seq1  GAAAAAGAGAGACAGGCATTAGCCAGAGAAGCAGGCAAATGTCCAATGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAGAGACAGGCATTAGCCAGAGAAGCAGGCAAATGTCCAATGAG  450

seq1  AATGAATTC  459
      |||||||||
seq2  AATGAATTC  459