MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-246D20
Chromosome	8 (Build37)
Map Location	130,229,660 - 130,382,151
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Tomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3, EG628847
Downstream gene	Nrp1, LOC668494, Itgb1, LOC100042659
Link	Open Mouse BAC browser

Click to get alignment info.

name	Tomm20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67952 MGI:1915202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm34 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52202 MGI:1098653
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043368 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043368
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 361 ESTs, 15 Proteins pseudo : _no_value

name	Gabarapl2-ps8_1688.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384873
definition	note : GABA(A) receptor-associated protein like 2 pseudogene 8_1688.1 pseudo : _no_value

name	Pard3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93742 MGI:2135608
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	EG628847 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628847 MGI:3644183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	Nrp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18186 MGI:106206
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668494 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668494
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	Itgb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16412 MGI:96610
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042659 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042659
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	Tomm20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13324685 GeneID:67952 MGI:1915202
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocase of outer mitochondrial membrane 20 homolog (yeast) transcript_id : NM_024214.1

name	Rbm34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42794006 GeneID:52202 MGI:1098653
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 34 transcript_id : NM_172762.2

name	Pard3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15809049 GeneID:93742 MGI:2135608
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : par-3 (partitioning defective 3) homolog (C. elegans) transcript_id : NM_033620.1

name	Pard3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365343 GeneID:93742 MGI:2135608
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : par-3 (partitioning defective 3) homolog (C. elegans) transcript_id : NM_001013580.2

name	Pard3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802520 GeneID:93742 MGI:2135608
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : par-3 (partitioning defective 3) homolog (C. elegans) transcript_id : NM_001013581.2

name	EG628847 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82918544 GeneID:628847 MGI:3644183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG628847 transcript_id : XM_895111.1

name	Nrp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679133 GeneID:18186 MGI:106206
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuropilin 1 transcript_id : NM_008737.1

name	Itgb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45504393 GeneID:16412 MGI:96610
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin beta 1 (fibronectin receptor beta) transcript_id : NM_010578.1

name	LOC100042659 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259075 GeneID:100042659
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to Stretchin-Mlck CG18255-PD transcript_id : XM_001478601.1

name	Tomm20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13324686 CCDS:CCDS22786.1 GeneID:67952 MGI:1915202
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005740 - mitochondrial envelope [Evidence IDA]; GO:0005742 - mitochondrial outer membrane translocase complex [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0019867 - outer membrane [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : translocase of outer mitochondrial membrane 20 homolog protein_id : NP_077176.1

name	Rbm34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42794007 CCDS:CCDS22787.1 GeneID:52202 MGI:1098653
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : RNA binding motif protein 34 protein_id : NP_766350.2

name	Pard3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15809050 CCDS:CCDS22788.1 GeneID:93742 MGI:2135608
definition	GO_component : GO:0005912 - adherens junction [Evidence IDA]; GO:0005938 - cell cortex [Evidence IDA]; GO:0005913 - cell-cell adherens junction [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005819 - spindle [Evidence IDA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007409 - axonogenesis [Evidence ISS]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence IC]; GO:0007163 - establishment and/or maintenance of cell polarity [Evidence ISS] [Evidence TAS]; GO:0007205 - protein kinase C activation [Evidence ISS] codon_start : 1 exception : mismatches in translation note : isoform 3 is encoded by transcript variant 3 product : partitioning-defective protein 3 homolog isoform 3 protein_id : NP_296369.1

name	Pard3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61888844 CCDS:CCDS22789.1 GeneID:93742 MGI:2135608
definition	GO_component : GO:0005912 - adherens junction [Evidence IDA]; GO:0005938 - cell cortex [Evidence IDA]; GO:0005913 - cell-cell adherens junction [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005819 - spindle [Evidence IDA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007409 - axonogenesis [Evidence ISS]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence IC]; GO:0007163 - establishment and/or maintenance of cell polarity [Evidence ISS] [Evidence TAS]; GO:0007205 - protein kinase C activation [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : partitioning-defective protein 3 homolog isoform 1 protein_id : NP_001013599.1

name	Pard3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61888842 GeneID:93742 MGI:2135608
definition	GO_component : GO:0005912 - adherens junction [Evidence IDA]; GO:0005938 - cell cortex [Evidence IDA]; GO:0005913 - cell-cell adherens junction [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005819 - spindle [Evidence IDA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007409 - axonogenesis [Evidence ISS]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence IC]; GO:0007163 - establishment and/or maintenance of cell polarity [Evidence ISS] [Evidence TAS]; GO:0007205 - protein kinase C activation [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : partitioning-defective protein 3 homolog isoform 2 protein_id : NP_001013598.1

name	EG628847 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82918545 GeneID:628847 MGI:3644183
definition	codon_start : 1 product : similar to insulinoma protein (rig) protein_id : XP_900204.1

name	Nrp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679134 CCDS:CCDS22790.1 GeneID:18186 MGI:106206
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IC] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0017154 - semaphorin receptor activity [Evidence IGI] [Evidence IPI] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0007411 - axon guidance [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0016477 - cell migration [Evidence IMP]; GO:0016358 - dendrite development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0007507 - heart development [Evidence IGI]; GO:0030517 - negative regulation of axon extension [Evidence IGI]; GO:0007399 - nervous system development [Evidence IEA]; GO:0048010 - vascular endothelial growth factor receptor signaling pathway [Evidence IMP] codon_start : 1 exception : mismatches in translation note : Neuropilin-1; transmembrane receptor product : neuropilin 1 protein_id : NP_032763.1

name	Itgb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45504394 CCDS:CCDS22791.1 GeneID:16412 MGI:96610
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0008305 - integrin complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0019717 - synaptosome [Evidence IDA] GO_function : GO:0005178 - integrin binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0042685 - cardioblast cell fate specification [Evidence IMP]; GO:0010002 - cardioblast differentiation [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0007160 - cell-matrix adhesion [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IMP]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0045596 - negative regulation of cell differentiation [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0000074 - regulation of progression through cell cycle [Evidence IMP]; GO:0045214 - sarcomere organization [Evidence IMP] codon_start : 1 note : beta1 integrin product : integrin beta 1 (fibronectin receptor beta) protein_id : NP_034708.1

name	LOC100042659 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259076 GeneID:100042659
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478651.1

name	LOC668494 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668494
definition	number : 1 pseudo : _no_value

name	LOC668494 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668494
definition	number : 2 pseudo : _no_value

name	LOC668494 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668494
definition	number : 3 pseudo : _no_value

name	LOC100043368 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259125 GeneID:100043368
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 361 ESTs, 15 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_034746.1

clone name	MSMg01-102J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429D13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-539B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263O01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-172H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085O03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-246D20.b	B6Ng01-246D20.g
ACC	GA054907	GA054908
length	899	139
definition	B6Ng01-246D20.b	B6Ng01-246D20.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(130,229,660 - 130,230,560)	(130,382,013 - 130,382,151)
sequence	gaattctgcagccagctagtctatctgaatcagtgagagactgtctcaaa aaataagctggagaatgactgaaaagcaaagccagtctcaacctctggcc tctctatgtgcacatgttggtattatataatacgtgagtatatttgtgca aactctgatttcagcgcttgcagctttccttaatccagtcagtgtggtag ataacataccttatacacaacatggaacatctgagttgctgatttcaggg ctaatcatagatttttttttttaacaaaaaaaatgtttaaaaaaggcagt agcattttcttcatacagtaagttcacacaatgcattgaaatcacaacat aggcacacactcaaaaacaacactctcacactgaatacaaataggtaaga aagcacaccatgttgcatttacactggcccctgtctcccgtccccttctg agcttcagcatagcccagttgctcaaccacctcatgtgggctgtgggcat gcccaggatggatacaatgtccagacaaggaaatgtgtgctgagcgattg atcacagagatttccaaccacattgcttaggtcaccatccagaccattcc tagaaactagagctctgcctagatggagactctgccaccttgggaacctg gctgcagacatctcttgtcttcccacactctgagtcagcagctgcttctc acagcatgtggaggttctgaggcgtggggcttgtttttcctttagcttgt ctacccttcagtgtggctggattggaacaggcttctccttcctgccacct tgtcagggaatcgctttgccagaacagaggggctgctctgagcgcccaca ggcaccggtcgtcagctgctcagttttttctccactgaagggctttgag	ttttaatcagagaaggagacgtcaggaaaacatattgcatgttcatatgt gttcttgcagctgagctagtgggggtgtgtaaacacacacaaaggaggga aggagggaaggaaggagggaaggaggaaaggaggaggga
quality values	Open. Hide. 34 10 29 24 58 58 38 25 52 47 62 62 38 31 62 62 54 62 62 62 62 62 62 54 62 62 62 62 62 54 59 44 38 38 62 43 43 62 62 59 32 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 42 54 59 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 49 43 59 56 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 52 52 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 54 58 58 58 54 58 54 58 52 58 54 54 58 58 58 58 58 58 58 54 58 58 52 58 54 58 58 58 58 52 54 58 58 54 54 54 52 52 52 41 41 52 51 48 47 41 38 41 47 50 58 58 51 36 58 58 51 50 50 50 58 51 50 49 35 50 49 28 37 50 51 58 58 54 53 53 40 51 50 43 37 51 49 51 53 53 50 58 50 58 54 49 50 51 58 52 58 54 44 40 49 39 49 44 44 40 52 42 54 36 28 53 51 49 39 40 43 50 50 44 54 39 40 44 41 39 53 32 17 54 32 54 54 54 36 30 46 39 53 49 50 49 52 42 39 18 54 30 42 31 51 49 51 37 37 37 37 40 37 54 20 41 35 53 39 37 37 29 53 27 42 26 40 28 43 31 32 32 32 32 22 6 31 29 30 32 29 32 31 41 31 52 31 33 47 24 25 31 29 35 29 34 33 45 29 51 47 31 35 31 31 32 45 21 29 30 29 31 31 26 30 27 31 25 33 29 30 31 39 19 43 27 39 24 31 31 30 27 25 24 26 18 27 25 46 31 32 31 13 19 24 30 32 16 31 27 25 23 22 37 18 18 31 25 23 26 27 30 41 25 46 17 41 25 39 16 13 18 25 22 31 26 32 24 42 22 34 31 32 22 35 33 25 27 32 34 16 27 10 14 31 33 23 18 31 10 29 21 27 17 7 11 26 38 11 36 25 26 20 26 14 6 6 31 12 12 16 21 48 44 38 19 32 19 37 18 48 47 47 32 20 11 23 47 28 31 13 28 25 24 33 14 11 5 6 12 39 32 15 10 33 12 10 9 11 10 25 33 22 24 30 23 19 22 17 26 16 9 15 17 7 14 23 9 15 6 7 6 6 8 5 9 6 16 19 27 21 13 10 18 20 9 6 6 19 28 13 26 47 17 14 21 20 24 8 6 13 28 21 20 16 16 7 9 27 26 5 4 4 21 10 33 47 25 8 27 27 17 13 7 16 10 28 12 23 13 10 27 11 6 5 10 13 23 12 16 9 13 8 11 5 10 11 16 17 16 6 7 19 16 7 22 4 8 20 21 33 38 47 32 20 12 10 5 6 16 6 13 6 16 9 16 38 9 3 8 26 24 5 11 6	Open. Hide. 62 62 56 43 30 34 40 28 17 14 35 40 59 59 59 62 62 62 59 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 59 62 62 59 62 62 62 59 59 59 54 42 49 49 56 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 43 56 27 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_130229660_130230560
seq2: B6Ng01-246D20.b_44_942

seq1  GAATTCTGCAGCCAGCTAGTCTATCTGAATCAGTGAGAGACTGTCTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAGCCAGCTAGTCTATCTGAATCAGTGAGAGACTGTCTCAAA  50

seq1  AAATAAGCTGGAGAATGACTGAAAAGCAAAGCCAGTCTCAACCTCTGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGCTGGAGAATGACTGAAAAGCAAAGCCAGTCTCAACCTCTGGCC  100

seq1  TCTCTATGTGCACATGTTGGTATTATATAATACGTGAGTATATTTGTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATGTGCACATGTTGGTATTATATAATACGTGAGTATATTTGTGCA  150

seq1  AACTCTGATTTCAGCGCTTGCAGCTTTCCTTAATCCAGTCAGTGTGGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGATTTCAGCGCTTGCAGCTTTCCTTAATCCAGTCAGTGTGGTAG  200

seq1  ATAACATACCTTATACACAACATGGAACATCTGAGTTGCTGATTTCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATACCTTATACACAACATGGAACATCTGAGTTGCTGATTTCAGGG  250

seq1  CTAATCATAGATTTTTTTTTTTAACAAAAAAAATGTTTAAAAAAGGCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCATAGATTTTTTTTTTTAACAAAAAAAATGTTTAAAAAAGGCAGT  300

seq1  AGCATTTTCTTCATACAGTAAGTTCACACAATGCATTGAAATCACAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTCTTCATACAGTAAGTTCACACAATGCATTGAAATCACAACAT  350

seq1  AGGCACACACTCAAAAACAACACTCTCACACTGAATACAAATAGGTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACACACTCAAAAACAACACTCTCACACTGAATACAAATAGGTAAGA  400

seq1  AAGCACACCATGTTGCATTTACACTGGCCCCTGTCTCCCGTCCCCTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACACCATGTTGCATTTACACTGGCCCCTGTCTCCCGTCCCCTTCTG  450

seq1  AGCTTCAGCATAGCCCAGTTGCTCAACCACCTCATGTGGGCTGTGGGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAGCATAGCCCAGTTGCTCAACCACCTCATGTGGGCTGTGGGCAT  500

seq1  GCCCAGGATGGATACAATGTCCAGACAAGGAAATGTGTGCTGAGCGATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGATGGATACAATGTCCAGACAAGGAAATGTGTGCTGAGCGATTG  550

seq1  ATCACAGAGATTTCCAACCACATTGCTTAGGTCACCATCCAGACCATTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGAGATTTCCAACCACATTGCTTAGGTCACCATCCAGACCATTCC  600

seq1  TAGAAACTAGAGCTCTGCCTAGATGGAGACTCTGCCACCTTGGGAACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACTAGAGCTCTGCCTAGATGGAGACTCTGCCACCTTGGGAACCTG  650

seq1  GCTGCAGACATCTCTTGTCCTTCCCACACTCTGAGTCAGCAGCTGCTTCT  700
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCTGCAGACATCTCTTGT-CTTCCCACACTCTGAGTCAGCAGCTGCTTCT  699

seq1  CACAGCATGTGGAGGTTCTGAGGCGTGGGGCTTGTTTTTCCTTTTAGCTT  750
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CACAGCATGTGGAGGTTCTGAGGCGTGGGGCTTGTTTTTCC-TTTAGCTT  748

seq1  GTCTACCCTCCAGTGTGGCTGGATTGGGAACAGGC-TCTCC-TCCTGCCA  798
      ||||||||| ||||||||||||||| ||||||||| ||||| ||||||||
seq2  GTCTACCCTTCAGTGTGGCTGGATT-GGAACAGGCTTCTCCTTCCTGCCA  797

seq1  CC-TGTCAGGGGAATCGCTTTGCCAGAACAGAGGGGCTGCTCTGAGCGCC  847
      || ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCA-GGGAATCGCTTTGCCAGAACAGAGGGGCTGCTCTGAGCGCC  846

seq1  CACAGGCACCGGCCGTCAGCTGCTTCCAG-TTTTTCTCACTTGAGGGGCT  896
      |||||||||||| |||||||||||  ||| ||||||||   ||| |||||
seq2  CACAGGCACCGGTCGTCAGCTGCT--CAGTTTTTTCTCCACTGAAGGGCT  894

seq1  TTGAG  901
      |||||
seq2  TTGAG  899

seq1: chr8_130382013_130382151
seq2: B6Ng01-246D20.g_71_209 (reverse)

seq1  TCCCTCCTCCTTTCCTCCTTCCCTCCTTCCTTCCCTCCTTCCCTCCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCTCCTTTCCTCCTTCCCTCCTTCCTTCCCTCCTTCCCTCCTTTG  50

seq1  TGTGTGTTTACACACCCCCACTAGCTCAGCTGCAAGAACACATATGAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTTACACACCCCCACTAGCTCAGCTGCAAGAACACATATGAACA  100

seq1  TGCAATATGTTTTCCTGACGTCTCCTTCTCTGATTAAAA  139
      |||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATGTTTTCCTGACGTCTCCTTCTCTGATTAAAA  139

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information