BAC Information

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BAC

Clone NameB6Ng01-246F24
Chromosome8 (Build37)
Map Location 7,583,286 - 7,722,181
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665127, EG546032
Downstream geneLOC100039836, Efnb2, 9430010O03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246F24.bB6Ng01-246F24.g
ACCGA055005GA055006
length1,1191,128
definitionB6Ng01-246F24.b B6Ng01-246F24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,583,286 - 7,584,312)(7,721,044 - 7,722,181)
sequence
gaattctttgtttagctctgagtcccatttttttaatggggttatttgat
tttctggagtccaccttcttgagttctttatatatgttggatattagtct
tctatctgatttaggataggtaaagatcctttcccactctgttggtggtc
tttttgtcttattgatggtgtcttttgccttaaagaagctttgcagtttc
atgaggttctgtttgtcaattctcgatcttacagcacaagccattgctct
tctgttcaggaatttttcccctgtgccaatatcttcgatgtttttcccca
ctttctcctctataagtttcactgtctctggttttatgtggagctccttg
atccacttagatttgaccttagtacaaggagataggaatggatcaattcg
aattcttctacatgataaccgccagttatgccagcaccatttgttgaaaa
tgctgtcttttttttccactggatggttttagttcgggatgggcctttct
ttagtcactgcctacagtcaaatcttatggaggcaatttctaaattgaat
tcctaccgctccgatatctctagcttgcatcaactctccaaaatctcaat
caatttttgctgccgaaatatttttagatgtgttcaaacatgtttggata
tgtggtctccctcgggagaatagttgacttgacagtggtgccactcaaat
aaaattgtgcctccatttcttaaaagctaacaattgcagatagttaattg
gctaaggagtggactaggtgcctaaatcccccttctttgtgctggtatct
gttttaatttctctaatttgtatttgtgggcttcctcaaaattccttaat
atctttatattctttcactaaaattactttctactaaaataagcccataa
tcactgcactgtttggaaattaagaaattgtttaaacagaactacatttg
ccccttcacattatataggaggtaatttttcttacattcttggatagaga
cataagtgtaaattctataaatccatttcctcacaccactgtggggaggg
agaaccctttctgcatatttcaccgaaagacctgggttacttgctcaata
tgcctgtgtctaacagagt

gaattcctaaatatatgttattcaagacatattggaaaactagagtctca
tgccaattcaaaagcttacataagtagtcaaaatcttttctgggtaaaat
catcctcgcatgccttctgtaaaggcatcttgcagacatcatatcttgca
tatgtatatatgcagataagctacatatctatgtatatgttatgcacata
atttgttttacatacataataatgaatacagaactctgtagaattttgac
tctataatctcatgcagatgattttttgagatttatttaatttgtagagg
tgttttgctgtatggacactacaaggatatcagaagaggctgacagacca
ctgacatacataatgttgagagttagcatttgggtcttgggaactgagcc
caggtcctcttcaagagctgtgagtactcttaacagctgattcatctttt
catcatctttatatcgattattataaagatagaagaaagaaaaactattg
ccaatattagtcttactatacacataaagtgaataaatctaagcctagta
atttaaatcagctatgcatcattgacaggaagagaatgttgggaaattca
catgtagtcaatattgtaagacaatgaatactcttataagatgaggcaaa
gtgaaaagtgtatgaagagtaagaagaagaaatgatactcttctctgttc
acaaagtgcaaaattatttcagcaggaaatgcaaacagacttgtattgca
ttataaagaagatgcataaagattttaagtgctggaagtcaaggaggaca
ctgttttctggacatgatgggctgttccttttgtgaatagaacacagtaa
tgtttgtatgcacgagccttgtccaaggtcaatccagccagtgtttagcc
ttagatggggagaatttcatggggcctacatgaggggctactgataaata
aagatgataaaaagtgggagagcactgggagagcgagaagtgttgatgga
gatgagcaagatgacaaatttctttgaaaccagtatgcaattcttacgaa
taaataaaatattaatatttaaaataatattcctccaagaattgaaactg
aactaagcaaaacttatccagtgccatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_7583286_7584312
seq2: B6Ng01-246F24.b_128_1161

seq1  GTTGGATATTAGTCTTCTATCTGATTTAGGATAGGTAAAGATCCTTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGATATTAGTCTTCTATCTGATTTAGGATAGGTAAAGATCCTTTCCC  50

seq1  ACTCTGTTGGTGGTCTTTTTGTCTTATTGATGGTGTCTTTTGCCTTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTTGGTGGTCTTTTTGTCTTATTGATGGTGTCTTTTGCCTTAAAG  100

seq1  AAGCTTTGCAGTTTCATGAGGTTCTGTTTGTCAATTCTCGATCTTACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTGCAGTTTCATGAGGTTCTGTTTGTCAATTCTCGATCTTACAGC  150

seq1  ACAAGCCATTGCTCTTCTGTTCAGGAATTTTTCCCCTGTGCCAATATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCATTGCTCTTCTGTTCAGGAATTTTTCCCCTGTGCCAATATCTT  200

seq1  CGATGTTTTTCCCCACTTTCTCCTCTATAAGTTTCACTGTCTCTGGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGTTTTTCCCCACTTTCTCCTCTATAAGTTTCACTGTCTCTGGTTTT  250

seq1  ATGTGGAGCTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAGCTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAG  300

seq1  GAATGGATCAATTCGAATTCTTCTACATGATAACCGCCAGTTATGCCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGATCAATTCGAATTCTTCTACATGATAACCGCCAGTTATGCCAGC  350

seq1  ACCATTTGTTGAAAATGCTGTCTTTTTTTTCCACTGGATGGTTTTAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTGTTGAAAATGCTGTCTTTTTTTTCCACTGGATGGTTTTAGTTC  400

seq1  GGGATGGGCCTTTCTTTAGTCACTGCCTACAGTCAAATCTTATGGAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGGCCTTTCTTTAGTCACTGCCTACAGTCAAATCTTATGGAGGCA  450

seq1  ATTTCTAAATTGAATTCCTACCGCTCCGATATCTCTAGCTTGCATCAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAAATTGAATTCCTACCGCTCCGATATCTCTAGCTTGCATCAACT  500

seq1  CTCCAAAATCTCAATCAATTTTTGCTGCCGAAATATTTTTAGATGTGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAATCTCAATCAATTTTTGCTGCCGAAATATTTTTAGATGTGTTC  550

seq1  AAACATGTTTGGATATGTGGTCTCCCTCGGGAGAATAGTTGACTTGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTTTGGATATGTGGTCTCCCTCGGGAGAATAGTTGACTTGACAG  600

seq1  TGGTGCCACTCAAATAAAATTGTGCCTCCATTTCTTAAAAGCTAACAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCCACTCAAATAAAATTGTGCCTCCATTTCTTAAAAGCTAACAATT  650

seq1  GCAGATAGTTAATTGGCTAAGGAGTGGACTAGGTGCCTAAATCCCCCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAGTTAATTGGCTAAGGAGTGGACTAGGTGCCTAAATCCCCCTTC  700

seq1  TTTGTGCTGGTATCTGTTTTAATTTCTCTAATTTGTATTTGTGGGCTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCTGGTATCTGTTTTAATTTCTCTAATTTGTATTTGTGGGCTTCC  750

seq1  TCAAAATTCCTTAATATCTTTATATTCTTTCACTAAAATTACTTTCTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATTCCTTAATATCTTTATATTCTTTCACTAAAATTACTTTCTACT  800

seq1  AAAATAAGCCCATAATCACTGCACTGTTTGG-AATTAAGAAATTGTTTAA  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAAATAAGCCCATAATCACTGCACTGTTTGGAAATTAAGAAATTGTTTAA  850

seq1  ACAGAACTACATTTGCCCCTCAACAATTATATAGGAGGTAATTTTTCTTA  899
      ||||||||||||||||||||  || |||||||||||||||||||||||||
seq2  ACAGAACTACATTTGCCCCTTCAC-ATTATATAGGAGGTAATTTTTCTTA  899

seq1  CATTCTTGGATAGAGACATAAGTGTAAAATTCTAATAAAACCATTTCCTC  949
      ||||||||||||||||||||||||| ||||||| ||||| ||||||||||
seq2  CATTCTTGGATAGAGACATAAGTGT-AAATTCT-ATAAATCCATTTCCTC  947

seq1  ACA-CACTGTGGG--AGGAGGAACCTTTCTGCATA-TTCACCGAAAGAC-  994
      ||| |||||||||   |||| | |||||||||||| ||||||||||||| 
seq2  ACACCACTGTGGGGAGGGAGAACCCTTTCTGCATATTTCACCGAAAGACC  997

seq1  -TGGTTAC-TGCTC-ATATG-CTGTGTCTTACAGAGT  1027
        |||||| ||||| ||||| |||||||| |||||||
seq2  TGGGTTACTTGCTCAATATGCCTGTGTCTAACAGAGT  1034


seq1: chr8_7721044_7722181
seq2: B6Ng01-246F24.g_66_1193 (reverse)

seq1  GATGGCACT-GATAATTTTTGCTTA-TTTAGTTTTTCAATTTCCTTGTGA  48
      ||||||||| ||||| ||||||||| || ||  ||||||||  ||||   
seq2  GATGGCACTGGATAAGTTTTGCTTAGTTCAG--TTTCAATT--CTTGGAG  46

seq1  GAATATTATTTTAAATA-TAATATTTTTATTTATTCGTTAAGAATTGCAT  97
      ||||||||||||||||| ||||| ||||||||||||| ||||||||||||
seq2  GAATATTATTTTAAATATTAATA-TTTTATTTATTCG-TAAGAATTGCAT  94

seq1  ACTTGTTTTCAAAGAAATTTGGTCATCTTTGCTCATCTTCCATCCAACAC  147
      || || |||||||||||||| |||||| ||||||||| ||||| ||||||
seq2  AC-TGGTTTCAAAGAAATTT-GTCATC-TTGCTCATC-TCCAT-CAACAC  139

seq1  TTCCTCGCTTCTCCCAGTGCTCTCCCACTTTTTATCATCTTTATTTTATC  197
      || ||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  TT-CTCGC-TCTCCCAGTGCTCTCCCACTTTTTATCATCTTTA-TTTATC  186

seq1  AGTAGCCCCTCATGTAGGCCCCATG-AATTCTCCCCATCTAAGGCTAAAC  246
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGTAGCCCCTCATGTAGGCCCCATGAAATTCTCCCCATCTAAGGCTAAAC  236

seq1  ACTGGCTGGATTGACCTTGGACAAGGCTCGTGCATACAAACATTACTGTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTGGATTGACCTTGGACAAGGCTCGTGCATACAAACATTACTGTG  286

seq1  TTCTATTCACAAAAGGAACAGCCCATCATGTCCAGAAAACAGTGTCCTCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTCACAAAAGGAACAGCCCATCATGTCCAGAAAACAGTGTCCTCC  336

seq1  TTGACTTCCAGCACTTAAAATCTTTATGCATCTTCTTTATAATGCAATAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTCCAGCACTTAAAATCTTTATGCATCTTCTTTATAATGCAATAC  386

seq1  AAGTCTGTTTGCATTTCCTGCTGAAATAATTTTGCACTTTGTGAACAGAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGTTTGCATTTCCTGCTGAAATAATTTTGCACTTTGTGAACAGAG  436

seq1  AAGAGTATCATTTCTTCTTCTTACTCTTCATACACTTTTCACTTTGCCTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTATCATTTCTTCTTCTTACTCTTCATACACTTTTCACTTTGCCTC  486

seq1  ATCTTATAAGAGTATTCATTGTCTTACAATATTGACTACATGTGAATTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATAAGAGTATTCATTGTCTTACAATATTGACTACATGTGAATTTC  536

seq1  CCAACATTCTCTTCCTGTCAATGATGCATAGCTGATTTAAATTACTAGGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATTCTCTTCCTGTCAATGATGCATAGCTGATTTAAATTACTAGGC  586

seq1  TTAGATTTATTCACTTTATGTGTATAGTAAGACTAATATTGGCAATAGTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTTATTCACTTTATGTGTATAGTAAGACTAATATTGGCAATAGTT  636

seq1  TTTCTTTCTTCTATCTTTATAATAATCGATATAAAGATGATGAAAAGATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTCTATCTTTATAATAATCGATATAAAGATGATGAAAAGATG  686

seq1  AATCAGCTGTTAAGAGTACTCACAGCTCTTGAAGAGGACCTGGGCTCAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGCTGTTAAGAGTACTCACAGCTCTTGAAGAGGACCTGGGCTCAGT  736

seq1  TCCCAAGACCCAAATGCTAACTCTCAACATTATGTATGTCAGTGGTCTGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGACCCAAATGCTAACTCTCAACATTATGTATGTCAGTGGTCTGT  786

seq1  CAGCCTCTTCTGATATCCTTGTAGTGTCCATACAGCAAAACACCTCTACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCTTCTGATATCCTTGTAGTGTCCATACAGCAAAACACCTCTACA  836

seq1  AATTAAATAAATCTCAAAAAATCATCTGCATGAGATTATAGAGTCAAAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATAAATCTCAAAAAATCATCTGCATGAGATTATAGAGTCAAAAT  886

seq1  TCTACAGAGTTCTGTATTCATTATTATGTATGTAAAACAAATTATGTGCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGAGTTCTGTATTCATTATTATGTATGTAAAACAAATTATGTGCA  936

seq1  TAACATATACATAGATATGTAGCTTATCTGCATATATACATATGCAAGAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATATACATAGATATGTAGCTTATCTGCATATATACATATGCAAGAT  986

seq1  ATGATGTCTGCAAGATGCCTTTACAGAAGGCATGCGAGGATGATTTTACC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTCTGCAAGATGCCTTTACAGAAGGCATGCGAGGATGATTTTACC  1036

seq1  CAGAAAAGATTTTGACTACTTATGTAAGCTTTTGAATTGGCATGAGACTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGATTTTGACTACTTATGTAAGCTTTTGAATTGGCATGAGACTC  1086

seq1  TAGTTTTCCAATATGTCTTGAATAACATATATTTAGGAATTC  1138
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTCCAATATGTCTTGAATAACATATATTTAGGAATTC  1128


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