BAC Information

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BAC

Clone NameB6Ng01-247K18
Chromosome8 (Build37)
Map Location 32,998,154 - 33,180,906
singlet/doubletdoublet
Overlap geneNrg1
Upstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340
Downstream gene2010007E15Rik, EG666589, EG546052, LOC100042715, LOC628408
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247K18.bB6Ng01-247K18.g
ACCGA055946GA055947
length3781,118
definitionB6Ng01-247K18.b B6Ng01-247K18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,998,154 - 32,998,531)(33,179,793 - 33,180,906)
sequence
caatatctgttgtagacacacagttgtgttagtgagggtttttttgtttg
tttgcttgctttgttttgtggttgttttttccccctttctggattaatct
gcatttagttcattttgttttgatatgatttttaagtcagtagacaaagt
aataaatttaaggaatatattatctcacacgtgtccattgtatgttttta
aaaatcatgattttgaaagaatgatcctaagagacacaagtcatcaacct
gtatctcatgagttaatatacttgtttgtctaatctttaatggagaggga
gtatggagaacacaagaagtcacaatcagaatttgcctgtggtgatggag
agggtggagatataagtgatgtggagga
gaattctctctgccaattgatttgaatctactttaagtttaaacacatta
ctggatgactaagccttattagtcagtaggaaaaccttactgttagtggg
attagaggtagcacaggagaagtctccattggagatttctgtctatcaat
aaatcaagggtaagtggaaaagaagaagaagaagaaggagaaggagaaga
agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaaggagcaagaacctgaagaaaaagg
aacactcaagggttggttctgagagactttagggtcacaatgaaagagac
aagagattcttcacagaccttctctggagatactgtctcccggctttgct
acacagagatataagtgtcatctactcatggtgaatgttagcaccaaaaa
gacctaatttatttttctgctttatgcaatcatagggattaaaggtgtaa
ctggtaatatagttataaaaaattcattaccataagtcattcactaattt
tttaaaaatagataatgtagttttgtatttatacacacacgtgtgagcct
gcatgagtatatttgcaatatgtgtgggcaggagtccagaagagggtgtc
ggaccttctgcaactggaagtacaggtgtttgcaagatgtcatggaagtg
ctaggaacaggacctaggtactctgtatggacagtgagtaatttttgcca
ctgagtcacctctccagtgccagatttattaattttttttctttacttac
gtaatactgaggcagcccaagatgagtgtgggagaaagtgggtatgatct
ttcatggataggcaccacacacttttctttcagttgatagatattttcag
tttgggttcagaaaaactctgtgtcctgtaggactgactctcttcaacag
tacacaaggagttagcacgaatccggcatttgctgctcacaatagaggcc
ttctcttccttgctggtgtcttggataatatgggcctgcctgtgaatatg
acagttatgttgcctgaaagaaataacacggaaagcttttcttggccttc
caattgcatttcttggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32998154_32998531
seq2: B6Ng01-247K18.b_52_429

seq1  CAATATCTGTTGTAGACACACAGTTGTGTTAGTGAGGGTTTTTTTGTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCTGTTGTAGACACACAGTTGTGTTAGTGAGGGTTTTTTTGTTTG  50

seq1  TTTGCTTGCTTTGTTTTGTGGTTGTTTTTTCCCCCTTTCTGGATTAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTGCTTTGTTTTGTGGTTGTTTTTTCCCCCTTTCTGGATTAATCT  100

seq1  GCATTTAGTTCATTTTGTTTTGATATGATTTTTAAGTCAGTAGACAAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAGTTCATTTTGTTTTGATATGATTTTTAAGTCAGTAGACAAAGT  150

seq1  AATAAATTTAAGGAATATATTATCTCACACGTGTCCATTGTATGTTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTTAAGGAATATATTATCTCACACGTGTCCATTGTATGTTTTTA  200

seq1  AAAATCATGATTTTGAAAGAATGATCCTAAGAGACACAAGTCATCAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATGATTTTGAAAGAATGATCCTAAGAGACACAAGTCATCAACCT  250

seq1  GTATCTCATGAGTTAATATACTTGTTTGTCTAATCTTTAATGGAGAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTCATGAGTTAATATACTTGTTTGTCTAATCTTTAATGGAGAGGGA  300

seq1  GTATGGAGAACACAAGAAGTCACAATCAGAATTTGCCTGTGGTGATGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGAGAACACAAGAAGTCACAATCAGAATTTGCCTGTGGTGATGGAG  350

seq1  AGGGTGGAGATATAAGTGATGTGGAGGA  378
      ||||||||||||||||||||||||||||
seq2  AGGGTGGAGATATAAGTGATGTGGAGGA  378

seq1: chr8_33179793_33180906
seq2: B6Ng01-247K18.g_68_1185 (reverse)

seq1  AACCAAGAAATGCAATTGGGAAGCCCAAGAAAAGCCTTCTCCGTGTTA-T  49
      | ||||||||||||||| ||||| |||||||||||  | ||||||||| |
seq2  ATCCAAGAAATGCAATT-GGAAGGCCAAGAAAAGC--TTTCCGTGTTATT  47

seq1  TCTTTCCAGCAACATAACTGTCAATATTTACA-GCAGG-CCATA-TAT-C  95
      ||||||  |||||||||||||| ||||| ||| ||||| ||||| ||| |
seq2  TCTTTCAGGCAACATAACTGTC-ATATTCACAGGCAGGCCCATATTATCC  96

seq1  AAGACACCAGGCAAGG-AGAG-AGGCCTCTATTGTGAGCAGCAAATGCCG  143
      ||||||||| |||||| |||| ||||||||||||||||||||||||||||
seq2  AAGACACCA-GCAAGGAAGAGAAGGCCTCTATTGTGAGCAGCAAATGCCG  145

seq1  GATTCGTTGCTAACT-CTTGTGTACTGTTGAAGAGAGTCAGTCCTACAGG  192
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  GATTCG-TGCTAACTCCTTGTGTACTGTTGAAGAGAGTCAGTCCTACAGG  194

seq1  ACACAGAG-TTTTCTGAA-CCAAACTGAAAATATCTTATCAACCTGAAAG  240
      |||||||| ||||||||| |||||||||||||||| |||||| |||||||
seq2  ACACAGAGTTTTTCTGAACCCAAACTGAAAATATC-TATCAA-CTGAAAG  242

seq1  AAAAGTGTGTGGTGCCTATCCATGAAAGATCATACCCACTTTCTCCCACA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGTGTGGTGCCTATCCATGAAAGATCATACCCACTTTCTCCCACA  292

seq1  CTCATCTT-GGCTGCCTCAGTATTACGTAAGTAAAG-AAAAAAATTAATA  338
      |||||||| ||||||||||||||||||||||||||| |||||||||||||
seq2  CTCATCTTGGGCTGCCTCAGTATTACGTAAGTAAAGAAAAAAAATTAATA  342

seq1  AATCTGGCACTGGAGAGGTGACTCAGTGGCAAAAATTACTCACTGTCCAT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGCACTGGAGAGGTGACTCAGTGGCAAAAATTACTCACTGTCCAT  392

seq1  ACAGAGTACCTAGGTCCTGTTCCTAGCACTTCCATGACATCTTGCAAACA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTACCTAGGTCCTGTTCCTAGCACTTCCATGACATCTTGCAAACA  442

seq1  CCTGTACTTCCAGTTGCAGAAGGTCCGACACCCTCTTCTGGACTCCTGCC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTTCCAGTTGCAGAAGGTCCGACACCCTCTTCTGGACTCCTGCC  492

seq1  CACACATATTGCAAATATACTCATGCAGGCTCACACGTGTGTGTATAAAT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATATTGCAAATATACTCATGCAGGCTCACACGTGTGTGTATAAAT  542

seq1  ACAAAACTACATTATCTATTTTTAAAAAATTAGTGAATGACTTATGGTAA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTACATTATCTATTTTTAAAAAATTAGTGAATGACTTATGGTAA  592

seq1  TGAATTTTTTATAACTATATTACCAGTTACACCTTTAATCCCTATGATTG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTTTTATAACTATATTACCAGTTACACCTTTAATCCCTATGATTG  642

seq1  CATAAAGCAGAAAAATAAATTAGGTCTTTTTGGTGCTAACATTCACCATG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGCAGAAAAATAAATTAGGTCTTTTTGGTGCTAACATTCACCATG  692

seq1  AGTAGATGACACTTATATCTCTGTGTAGCAAAGCCGGGAGACAGTATCTC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATGACACTTATATCTCTGTGTAGCAAAGCCGGGAGACAGTATCTC  742

seq1  CAGAGAAGGTCTGTGAAGAATCTCTTGTCTCTTTCATTGTGACCCTAAAG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAGGTCTGTGAAGAATCTCTTGTCTCTTTCATTGTGACCCTAAAG  792

seq1  TCTCTCAGAACCAACCCTTGAGTGTTCCTTTTTCTTCAGGTTCTTGCTCC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAGAACCAACCCTTGAGTGTTCCTTTTTCTTCAGGTTCTTGCTCC  842

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  892

seq1  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTCCTTCTTCTTCT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTCCTTCTTCTTCT  942

seq1  TCTTCTTTTCCACTTACCCTTGATTTATTGATAGACAGAAATCTCCAATG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTTCCACTTACCCTTGATTTATTGATAGACAGAAATCTCCAATG  992

seq1  GAGACTTCTCCTGTGCTACCTCTAATCCCACTAACAGTAAGGTTTTCCTA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTCTCCTGTGCTACCTCTAATCCCACTAACAGTAAGGTTTTCCTA  1042

seq1  CTGACTAATAAGGCTTAGTCATCCAGTAATGTGTTTAAACTTAAAGTAGA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTAATAAGGCTTAGTCATCCAGTAATGTGTTTAAACTTAAAGTAGA  1092

seq1  TTCAAATCAATTGGCAGAGAGAATTC  1114
      ||||||||||||||||||||||||||
seq2  TTCAAATCAATTGGCAGAGAGAATTC  1118