BAC Information

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BAC

Clone NameB6Ng01-249P23
Chromosome8 (Build37)
Map Location 67,780,591 - 67,904,201
singlet/doubletdoublet
Overlap geneLOC665405, Vaultrc-ps1
Upstream geneCpe, Sc4mol, Klhl2, LOC100040903, LOC619647, 3110005G23Rik, Trim75, Trim60, LOC665388, LOC665396, LOC100040949
Downstream geneLOC100040967, March1, LOC100040986
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249P23.bB6Ng01-249P23.g
ACCGA057669GA057670
length1,1251,126
definitionB6Ng01-249P23.b B6Ng01-249P23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,780,591 - 67,781,731)(67,903,682 - 67,904,201)
sequence
gaattcataagaaatagaataaaaaattactcctgagtgtgatggcttac
acatgtaatctcagtggtaggttgagataagaggattactatgagtttaa
ggccagcttgggttgcagagtaagaccctatataaaaagcaaaacccatc
ccgactatcaaattgactttcttacctatagcaatgcatccagtcatatt
tttatttaaagctggcatctagctagggagaaccaagctgcttccttttg
atgcataaagtctttcacagtatacagtgtgaatttttttctcatgaatt
tatttacttattcattttatatcccattctctgtctccccatctcccctc
acagagttcttcccccatgccccctccctttttttctgacagggtgaatt
tccatgcccctgttattcccccaccctggtgcatcaagtctcttcagggc
taagtgtgtcctttcccagtgaggccagatgaggcagcccagttggggaa
tggattccacagacaggcaacttctttatggataactctgctccagttgt
tcagaacccacatggagactgagctggatgtctgctacatatgtgcagga
cctcagtctagcctgtgcaagttgtttggttggtggttcagtctctgaaa
gttctaagggtccaggttagttttttaacttgttacttcgtcttttatta
ccatcttcattttcattgacaactcttcaattcctacctcatctcctatt
caagaactaaccaggcctggccctatttagcttctgagattagctgaggt
cattgtgaataatctttgacatagaagcttatgtttaaaatcaccaaatg
gaaattggcttgaccctttgctctttatcttccatgtgtaacacataagg
agtgaaaattagtgtcttttccccattctgagtaaggcacaaattgcctg
atctgggaatgctttttgttcttttcttttttttatcttatttttatgtt
tatgaatatattagacatgtacaaggagacttactctttttttttttttg
agttttgagtttttttgagacagctttcctgtgtaggcctggctgtcttg
gaacctcactctagtagaccaggct

gaattcttaaagaagtgagagcaaaaggattataagagccagagatggta
aatgactgcaaggaaacagtattttccagacacaacagggagagtgcaca
gatgaacctacagtaggtgtgacaggatgtataaaccagacaaaatcata
gcatggagaatacaaatgggcataaaatcctaccccaacagaggaattaa
taacaattaatatggaaagctttcattaagcatgtgggcccaataggtcc
accactctccagtggacagctacatactgaagagtatatgtgacatatat
attaatataaatatagtatactatatatgtatatatttataatataatgt
aatatgtattttatataatgttttcatttaattcataaatttgctttata
aaggtagagactcaaggaagcagtaaaagtcagttccttgtatgcttaat
gagacaaggagcagtagatttttgtcaatgtgactatagtgcagagctta
aaagagaagtaactataataaagcctgagctgtattttctatgtctcagc
ttcttgccttagaaaataaggttattgccttttcgtgtagccgtgggaga
atgtttccacatgggtatttcagcttctcctccatcaaccagcacaaagg
tcaatgcaatcaacttgcaacggctgttttttcaggtgacatttacttag
atagttaatgccaaaatgctatgttttttaactctttcatacatattcac
ctgcacatgttatgaggattaaagactctaaatccccaattactttgaca
cagataaagatctttttgagacagcaatatctccgttatgggtagaaatt
aactgctgtgaaggtgcagagtgatttcgagaatgaacctatgatatctt
ctgcctgtaagctctcttattcccagttctgcttttcaattatcaggttc
ctcctgtcaagggtgccctgtcaaacagcttttctctctggggatggagt
tacctccataggacaccagggactctcactgttactaagaataacagaac
agtatactgttcaaggatttcaaatgttagccaatctacctggtatccac
taaccaacctgtatagtgttttacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_67780591_67781731
seq2: B6Ng01-249P23.b_45_1169

seq1  GAATTCATAAGAAATAGAATAAAAAATTACTCCTGAGTGTGATGGCTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAGAAATAGAATAAAAAATTACTCCTGAGTGTGATGGCTTAC  50

seq1  ACATGTAATCTCAGTGGTAGGTTGAGATAAGAGGATTACTATGAGTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAATCTCAGTGGTAGGTTGAGATAAGAGGATTACTATGAGTTTAA  100

seq1  GGCCAGCTTGGGTTGCAGAGTAAGACCCTATATAAAAAGCAAAACCCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCTTGGGTTGCAGAGTAAGACCCTATATAAAAAGCAAAACCCATC  150

seq1  CCGACTATCAAATTGACTTTCTTACCTATAGCAATGCATCCAGTCATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTATCAAATTGACTTTCTTACCTATAGCAATGCATCCAGTCATATT  200

seq1  TTTATTTAAAGCTGGCATCTAGCTAGGGAGAACCAAGCTGCTTCCTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAAAGCTGGCATCTAGCTAGGGAGAACCAAGCTGCTTCCTTTTG  250

seq1  ATGCATAAAGTCTTTCACAGTATACAGTGTGAATTTTTTTCTCATGAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAAAGTCTTTCACAGTATACAGTGTGAATTTTTTTCTCATGAATT  300

seq1  TATTTACTTATTCATTTTATATCCCATTCTCTGTCTCCCCATCTCCCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTTATTCATTTTATATCCCATTCTCTGTCTCCCCATCTCCCCTC  350

seq1  ACAGAGTTCTTCCCCCATGCCCCCTCCCTTTTTTTCTGACAGGGTGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTTCTTCCCCCATGCCCCCTCCCTTTTTTTCTGACAGGGTGAATT  400

seq1  TCCATGCCCCTGTTATTCCCCCACCCTGGTGCATCAAGTCTCTTCAGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCCCCTGTTATTCCCCCACCCTGGTGCATCAAGTCTCTTCAGGGC  450

seq1  TAAGTGTGTCCTTTCCCAGTGAGGCCAGATGAGGCAGCCCAGTTGGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTGTCCTTTCCCAGTGAGGCCAGATGAGGCAGCCCAGTTGGGGAA  500

seq1  TGGATTCCACAGACAGGCAACTTCTTTATGGATAACTCTGCTCCAGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCCACAGACAGGCAACTTCTTTATGGATAACTCTGCTCCAGTTGT  550

seq1  TCAGAACCCACATGGAGACTGAGCTGGATGTCTGCTACATATGTGCAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACCCACATGGAGACTGAGCTGGATGTCTGCTACATATGTGCAGGA  600

seq1  CCTCAGTCTAGCCTGTGCAAGTTGTTTGGTTGGTGGTTCAGTCTCTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTCTAGCCTGTGCAAGTTGTTTGGTTGGTGGTTCAGTCTCTGAAA  650

seq1  GTTCTAAGGGTCCAGGTTAGTTTTTTAACTTGTTACTTCGTCTTTTATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAGGGTCCAGGTTAGTTTTTTAACTTGTTACTTCGTCTTTTATTA  700

seq1  CCATCTTCATTTTCATTGACAACTCTTCAATTCCTACCTCATCTCCTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTCATTTTCATTGACAACTCTTCAATTCCTACCTCATCTCCTATT  750

seq1  CAAGAACTAACCAGGCCTGGCCCTATTTAGCTTCTGAGATTAGCTGAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACTAACCAGGCCTGGCCCTATTTAGCTTCTGAGATTAGCTGAGGT  800

seq1  CATTGTGAATAATCTTTGACATAGAAGCTTATGTTTAAAATCACCAAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGAATAATCTTTGACATAGAAGCTTATGTTTAAAATCACCAAATG  850

seq1  G-AATTGGCTTGACCCTTTGCTCTTTATCTTCCATGTGTAACACAATAAG  899
      | |||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAAATTGGCTTGACCCTTTGCTCTTTATCTTCCATGTGTAACAC-ATAAG  899

seq1  GAGTGAAAATTAGTGTCTTTTCCCCATTCTGAGTAAGGCACAAATTGCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAAAATTAGTGTCTTTTCCCCATTCTGAGTAAGGCACAAATTGCCT  949

seq1  GAATCTGGGAATGCTTTTTGTTTCTTTTTCTTTTTTTTTTTATTCTTAAT  999
      | ||||||||||||||||||||   |||||||||||||     |||||  
seq2  G-ATCTGGGAATGCTTTTTGTT--CTTTTCTTTTTTTT----ATCTTA--  990

seq1  TTTTTATGTTTATTGAATAATAATTAGACATGTACAAGGAGACTTACTCT  1049
      |||||||||||| ||||||   ||||||||||||||||||||||||||| 
seq2  TTTTTATGTTTA-TGAATA--TATTAGACATGTACAAGGAGACTTACTC-  1036

seq1  TTTTTTTTTTTTTTGAGTTTTTGAGTTTTTTTTGAGACAGGCTTTCTCTG  1099
       |||||||||||||||| ||||||| ||||||||||||| |||||| |||
seq2  -TTTTTTTTTTTTTGAG-TTTTGAG-TTTTTTTGAGACA-GCTTTC-CTG  1081

seq1  TGTAGCCCTGGCTGTCCTGGAA-CTCACTCT-GTAGACCAGGCT  1141
      ||||| |||||||||| ||||| |||||||| ||||||||||||
seq2  TGTAGGCCTGGCTGTCTTGGAACCTCACTCTAGTAGACCAGGCT  1125


seq1: chr8_67903682_67904201
seq2: B6Ng01-249P23.g_667_1191 (reverse)

seq1  AGGTAAAACACTATACAGGTTGGTTTAGTGGAT-CAAAGTAGGATGTGCT  49
      ||||||||||||||||||||||| ||||||||| | | ||| |||  |||
seq2  AGGTAAAACACTATACAGGTTGG-TTAGTGGATACCAGGTA-GATTGGCT  48

seq1  AACA-TTGGAATCTTTGAACAGTATTACTGGTCTG-TATTC-TAGTAACA  96
      |||| ||| |||| |||||||||| ||||| |||| ||||| ||||||||
seq2  AACATTTGAAATCCTTGAACAGTA-TACTGTTCTGTTATTCTTAGTAACA  97

seq1  GTGAGAAGTCCCTGGTGTCCTATGGAGGTAACTCCAT-CCCAGAGAG-AA  144
      ||||| ||||||||||||||||||||||||||||||| ||||||||| ||
seq2  GTGAG-AGTCCCTGGTGTCCTATGGAGGTAACTCCATCCCCAGAGAGAAA  146

seq1  AGCTGTTTGACAGGGCAACCTTGACAGGA-GAACCTGATAA-TGGAAAGC  192
      ||||||||||||||||| ||||||||||| ||||||||||| || |||||
seq2  AGCTGTTTGACAGGGCACCCTTGACAGGAGGAACCTGATAATTGAAAAGC  196

seq1  AGAACTGGGAATAAGAGAGCTTACAGGCAGAAGATATCATAGGTTCATTC  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGGGAATAAGAGAGCTTACAGGCAGAAGATATCATAGGTTCATTC  246

seq1  TCG-AATCACTCTGCACCTTCACAGCAGTTAATTTCTACCCATAACGGAG  291
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAATCACTCTGCACCTTCACAGCAGTTAATTTCTACCCATAACGGAG  296

seq1  ATATTGCTGTCTCAAAAAGATCTTTATCTGTGTCAAAGTAATTGGGGATT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCTGTCTCAAAAAGATCTTTATCTGTGTCAAAGTAATTGGGGATT  346

seq1  TAGAGTCTTTAATCCTCATAACATGTGCAGGTGAATATGTATGAAAGAGT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTCTTTAATCCTCATAACATGTGCAGGTGAATATGTATGAAAGAGT  396

seq1  TAAAAAACATAGCATTTTGGCATTAACTATCTAAGTAAATGTCACCTGAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAACATAGCATTTTGGCATTAACTATCTAAGTAAATGTCACCTGAA  446

seq1  AAAACAGCCGTTGCAAGTTGATTGCATTGACCTTTGTGCTGGTTGATGGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCCGTTGCAAGTTGATTGCATTGACCTTTGTGCTGGTTGATGGA  496

seq1  GGAGAAGCTGAAATACCCATGTGGAAACA  520
      |||||||||||||||||||||||||||||
seq2  GGAGAAGCTGAAATACCCATGTGGAAACA  525


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