BAC Information

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BAC

Clone NameB6Ng01-254J20
Chromosome8 (Build37)
Map Location 63,194,326 - 63,195,461
singlet/doubletsinglet
Overlap genenone
Upstream geneAadat, Mfap3l
Downstream geneLOC100040679, 2700029M09Rik, Clcn3, B230317F23Rik, Nek1, Sh3rf1, EG664975, Cbr4, Palld, LOC100040872
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254J20.bB6Ng01-254J20.g
ACCGA061036GA061037
length1,1061,133
definitionB6Ng01-254J20.b B6Ng01-254J20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatcggtgttggattttg
tcaaatgctttctcagcatctaatgagatgatcatgtgggtttttttttc
tttgactttgtttatatagtagactatgtcgatagattcccatgtattaa
accatccctgcatccttggattgaaacctacttggtcaggatggatgatt
gttttgatgtgttcttggatttggttagggagaattttattgagtatttt
tgcatcaatattcataagggaaattggtctgaagttctctatctttgttg
ggtctttctgtggtttaggtatcagagtaattgtggcttcaaggaatgaa
ctgggtagagtaccttctgtttctattttgtggaatagtttgagaagaaa
tggaattagatcttctttgaaggtctgatagaactttgcactaaacccat
gtggtcctaggcttttttggttgggagactattaatgactccttctattc
ctttaggggatataggactgtctaggtcattaatctgatcctgatttaac
tttggcacctggtatctgtctagaaatttgttcatttcatccaggttctc
cagttttgttgagtatagccttttgtagaaggatctgatgatgcattgga
tttcttcaggatctgttgttatgtctcccttttcatttctgattttgtta
attagaatgctttccctgtgtcctctagtgagtctggctaagggttttat
ctatcttgttgatattctcaaagaagcagctcctcctttggttgattctt
tgaatagttcttgtttccactttggttggttttactcctgagttgattat
ttcctgctgttctactcctcttggatgaatttgctcccttttgttctata
gcttttaggtgtgatgtcaagtgctagtgtgttctgtctctagtttcttt
ttggaggcactcagggctatgagttttctcttaaaatgcttcattgtgtt
ccatagttgggtgtgtttggccttcatttcattaactctaaaaggtcttt
aatttctcttatcatccttcacaaggtaaaatgaggaaggggatgtcaat
tgcaga
gaattctgatatatggacgacatgtgatagaagtcattcctggttgccaa
ctgagaagtgcactgaggaagaggacattggttatccccacagagtttat
gcatgaagtttggctcacagcactgtgatggcctaagtatagaaacacac
atgtgacagttgcctaagatgtttgactatggaccacagttttgacagct
ggaggtaaggggccattttcacatttcttcccttatgcttacattcacat
gggccttccatatatgactacttggattctctgagccattagaggggagg
aatggtctataagacaagcatatgtatcttatgtatcatatggatcataa
ccgtatgtatatagtcatatatattttgtcacctctgtcttatcctaatt
aataaaagcaactcacaggtcctgcttacattcaagagaagggaatagga
aatagtctgtagagtccatatttgcatacatgtgattcaagacataaatt
taaccataaactgtaaagcaatggcctcacgagaaggaggcgattggttg
gtgacagttggtagacaagagacaaagtcacgtttaagtgaattacattt
ggaaaaaagcttttgtttttgatgtttacttttaatatatagagaaagtg
aataaacgagagaaattctgaagtgtgtaggaggaaagtctccatgcaag
gatcatcagtcagccgccactttcctggtaaagaagaagacatagttctt
tggtgagtttgagagtgaaagcagtatttgtggattgaggaaaagggaag
acagctaagatgtggactacaggggtgtcgtatgtgtagatgttaattgg
gaaaataggaagaataacagtgaaaggtagacagagtcatcttagcttgt
gaatttccttttaaacttttggccagctatgctggattataggtggagaa
atgcatgattaaggtgttgacgtcatcctaaaggaggccatatgaggtca
agtaaagttttagacatagagtagagttcttcaagatagatactggtggg
ggagacagtagtttcagtaagacctggaggggttgtaagagaatcaattt
tttagtttaatttgaatctagcaaattgaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_63194326_63195461
seq2: B6Ng01-254J20.g_68_1200 (reverse)

seq1  ATTTTCAAATTTTGCTAGAAATTCAAATAAAACTTAAAAAATTGAATTCT  50
      ||||||||  ||||||||  |||||||| |||| |||||||||| |||||
seq2  ATTTTCAA--TTTGCTAG--ATTCAAATTAAAC-TAAAAAATTG-ATTCT  44

seq1  CTTTACCAACCCCTC--AGTCTTACTGAAACTACTGTCTCCCC--ACAGT  96
      |||   |||||||||   |||||||||||||||||||||||||   ||||
seq2  CTT--ACAACCCCTCCAGGTCTTACTGAAACTACTGTCTCCCCCACCAGT  92

seq1  ATCCTATCCTTGAAGAACCTCTACTCCTATGTCTTAAAACTTTACTTGAC  146
      || |||| ||||||||| ||||||| ||||||| ||||||||||||||||
seq2  AT-CTAT-CTTGAAGAA-CTCTACT-CTATGTC-TAAAACTTTACTTGAC  137

seq1  CTCATATTGCCT-CTTTA-GATGACGTCAACACCTTAATCATGCATTTCT  194
      ||||||| |||| ||||| |||||||||||||||||||||||||||||||
seq2  CTCATATGGCCTCCTTTAGGATGACGTCAACACCTTAATCATGCATTTCT  187

seq1  CCA-CTAT-ATCCAGCATAGCTGGCCAAAAGTTTAAAA-GAAATTCACAA  241
      ||| |||| ||||||||||||||||||||||||||||| |||||||||||
seq2  CCACCTATAATCCAGCATAGCTGGCCAAAAGTTTAAAAGGAAATTCACAA  237

seq1  GCTAAGATGACTCTGTCTACCTTTCACTGTTA-TCTTCCTATTTTCCCAA  290
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCTAAGATGACTCTGTCTACCTTTCACTGTTATTCTTCCTATTTTCCCAA  287

seq1  TTAACATCTACACATACGACACCCCTGTAGTCCACATCTTAGCTGTCTTC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATCTACACATACGACACCCCTGTAGTCCACATCTTAGCTGTCTTC  337

seq1  CCTTTTCCTCAATCCACAAATACTGCTTTCACTCTCAAACTCACCAAAGA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCCTCAATCCACAAATACTGCTTTCACTCTCAAACTCACCAAAGA  387

seq1  ACTATGTCTTCTTCTTTACCAGGAAAGTGGCGGCTGACTGATGATCCTTG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTCTTCTTCTTTACCAGGAAAGTGGCGGCTGACTGATGATCCTTG  437

seq1  CATGGAGACTTTCCTCCTACACACTTCAGAATTTCTCTCGTTTATTCACT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGACTTTCCTCCTACACACTTCAGAATTTCTCTCGTTTATTCACT  487

seq1  TTCTCTATATATTAAAAGTAAACATCAAAAACAAAAGCTTTTTTCCAAAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTATATATTAAAAGTAAACATCAAAAACAAAAGCTTTTTTCCAAAT  537

seq1  GTAATTCACTTAAACGTGACTTTGTCTCTTGTCTACCAACTGTCACCAAC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCACTTAAACGTGACTTTGTCTCTTGTCTACCAACTGTCACCAAC  587

seq1  CAATCGCCTCCTTCTCGTGAGGCCATTGCTTTACAGTTTATGGTTAAATT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCGCCTCCTTCTCGTGAGGCCATTGCTTTACAGTTTATGGTTAAATT  637

seq1  TATGTCTTGAATCACATGTATGCAAATATGGACTCTACAGACTATTTCCT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTGAATCACATGTATGCAAATATGGACTCTACAGACTATTTCCT  687

seq1  ATTCCCTTCTCTTGAATGTAAGCAGGACCTGTGAGTTGCTTTTATTAATT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTTCTCTTGAATGTAAGCAGGACCTGTGAGTTGCTTTTATTAATT  737

seq1  AGGATAAGACAGAGGTGACAAAATATATATGACTATATACATACGGTTAT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAGACAGAGGTGACAAAATATATATGACTATATACATACGGTTAT  787

seq1  GATCCATATGATACATAAGATACATATGCTTGTCTTATAGACCATTCCTC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCATATGATACATAAGATACATATGCTTGTCTTATAGACCATTCCTC  837

seq1  CCCTCTAATGGCTCAGAGAATCCAAGTAGTCATATATGGAAGGCCCATGT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTAATGGCTCAGAGAATCCAAGTAGTCATATATGGAAGGCCCATGT  887

seq1  GAATGTAAGCATAAGGGAAGAAATGTGAAAATGGCCCCTTACCTCCAGCT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAAGCATAAGGGAAGAAATGTGAAAATGGCCCCTTACCTCCAGCT  937

seq1  GTCAAAACTGTGGTCCATAGTCAAACATCTTAGGCAACTGTCACATGTGT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAACTGTGGTCCATAGTCAAACATCTTAGGCAACTGTCACATGTGT  987

seq1  GTTTCTATACTTAGGCCATCACAGTGCTGTGAGCCAAACTTCATGCATAA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTATACTTAGGCCATCACAGTGCTGTGAGCCAAACTTCATGCATAA  1037

seq1  ACTCTGTGGGGATAACCAATGTCCTCTTCCTCAGTGCACTTCTCAGTTGG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTGGGGATAACCAATGTCCTCTTCCTCAGTGCACTTCTCAGTTGG  1087

seq1  CAACCAGGAATGACTTCTATCACATGTCGTCCATATATCAGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGGAATGACTTCTATCACATGTCGTCCATATATCAGAATTC  1133