BAC Information

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BAC

Clone NameB6Ng01-256B05
Chromosome8 (Build37)
Map Location 69,040,933 - 69,042,029
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040967, March1, LOC100040986, 1810029B16Rik, Tktl2
Downstream geneNpy5r, Npy1r, BC053440, LOC665453, Nat1, Nat2, LOC100041265
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256B05.bB6Ng01-256B05.g
ACCGA062126GA062127
length1,1061,186
definitionB6Ng01-256B05.b B6Ng01-256B05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtctaccttattgtgacagtgattcaaccacagctatagaca
tgtagtttcccttactcatgtgccaccaatagactgttatatttctggtc
actttttatggtacatacttcttccaagcagcttctggacataagcaaat
ctcccttcaatatgttgtgaaggttactgtataagtagagcacttaaaaa
tagtcactaggggctagagaagttactctgtggttcagagtacttgttgc
ttgtgcagtggaccagggttcagttcccagcagccacatgatggtttgca
actagcaattactccagttccaggggttctgatgccgcctttttacctct
acaggcatcacacacacacacaaacatacatgcaggcaaaacatgaatac
acacagagaaaataaatctttataaaaatgtaaaagacagccactagtat
atttgttgtaagccttaaatgtattttggttcaatatcttttcataattt
cctcaaattggataaaaacctctcttttctgtccgaagtcttaagagcag
gtacaggtcaaaatgtacccttattgctgttcagggcacagtgccctgga
tgcttgagagctctctcccttagtcagaattaatctatcctcatatttta
tatgtcctaatttcattaaggacattaaatatggtgtaatgttcaatttt
aaaggtaaattaataggacagaagcacaccctgaaaatgatcaatagatg
aaacctcaaattttctgggagtatgtgaggaaaatatttttaaaagcact
gacttagttaattaggacccattgtatcaggaaactactggcacgaggaa
agagtgtagtccttcaagatcatcagctttagtttctcctttttttcccc
tttaacattgaacctgaatttgaaaccacatcttttttgggacagtctgt
gtggggatgaggctgactgtggatgtatttattcggtgatttttagaact
gaactattgaacgtaaggtatatttctcttatttgtccagagactgtgat
ccgtgtgaagtgctagtccatttgtgttgctttctattttgcataattcc
aagctc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataacc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggccctagcaaa
cacaagaagtggatgctcacagtcagctaatgggatggatcacagggctc
caatggaaggagctagagaaagtaccaaggagctaaagggatcttcaact
cctatagttggaacaaacattatgaactaaacagtaccccttgagctctt
tgactcttagctgcatatgtatcaaaagaatgggcctagtcgtcaatcac
tggtaaagagaaagcctaatgacaccgcgacttgtatggtccctgttaca
gggcaatcctccaaggggcccaaactggtgtgagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_69040933_69042029
seq2: B6Ng01-256B05.b_46_1151

seq1  GAATTCATGTCTACCTTATTGTGACAGTGATTCAACCACAGCTATAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTCTACCTTATTGTGACAGTGATTCAACCACAGCTATAGACA  50

seq1  TGTAGTTTCCCTTACTCATGTGCCACCAATAGACTGTTATATTTCTGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTTCCCTTACTCATGTGCCACCAATAGACTGTTATATTTCTGGTC  100

seq1  ACTTTTTATGGTACATACTTCTTCCAAGCAGCTTCTGGACATAAGCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTATGGTACATACTTCTTCCAAGCAGCTTCTGGACATAAGCAAAT  150

seq1  CTCCCTTCAATATGTTGTGAAGGTTACTGTATAAGTAGAGCACTTAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTCAATATGTTGTGAAGGTTACTGTATAAGTAGAGCACTTAAAAA  200

seq1  TAGTCACTAGGGGCTAGAGAAGTTACTCTGTGGTTCAGAGTACTTGTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACTAGGGGCTAGAGAAGTTACTCTGTGGTTCAGAGTACTTGTTGC  250

seq1  TTGTGCAGTGGACCAGGGTTCAGTTCCCAGCAGCCACATGATGGTTTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCAGTGGACCAGGGTTCAGTTCCCAGCAGCCACATGATGGTTTGCA  300

seq1  ACTAGCAATTACTCCAGTTCCAGGGGTTCTGATGCCGCCTTTTTACCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCAATTACTCCAGTTCCAGGGGTTCTGATGCCGCCTTTTTACCTCT  350

seq1  ACAGGCATCACACACACACACAAACATACATGCAGGCAAAACATGAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCATCACACACACACACAAACATACATGCAGGCAAAACATGAATAC  400

seq1  ACACAGAGAAAATAAATCTTTATAAAAATGTAAAAGACAGCCACTAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGAAAATAAATCTTTATAAAAATGTAAAAGACAGCCACTAGTAT  450

seq1  ATTTGTTGTAAGCCTTAAATGTATTTTGGTTCAATATCTTTTCATAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTGTAAGCCTTAAATGTATTTTGGTTCAATATCTTTTCATAATTT  500

seq1  CCTCAAATTGGATAAAAACCTCTCTTTTCTGTCCGAAGTCTTAAGAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAATTGGATAAAAACCTCTCTTTTCTGTCCGAAGTCTTAAGAGCAG  550

seq1  GTACAGGTCAAAATGTACCCTTATTGCTGTTCAGGGCACAGTGCCCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGTCAAAATGTACCCTTATTGCTGTTCAGGGCACAGTGCCCTGGA  600

seq1  TGCTTGAGAGCTCTCTCCCTTAGTCAGAATTAATCTATCCTCATATTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAGAGCTCTCTCCCTTAGTCAGAATTAATCTATCCTCATATTTTA  650

seq1  TATGTCCTAATTTCATTAAGGACATTAAATATGGTGTAATGTTCAATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCTAATTTCATTAAGGACATTAAATATGGTGTAATGTTCAATTTT  700

seq1  AAAGGTAAATTAATAGGACAGAAGCACACCCTGAAAATGATCAATAGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTAAATTAATAGGACAGAAGCACACCCTGAAAATGATCAATAGATG  750

seq1  AAACCTCAAATTTTCTGGGAGTATGTGAGGAAAATATTTTTAAAAGCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCAAATTTTCTGGGAGTATGTGAGGAAAATATTTTTAAAAGCACT  800

seq1  GACTTAGTTAATTAGGACCCATTGTATCAGGGAACTACTGGCACGAGGAA  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GACTTAGTTAATTAGGACCCATTGTATCAGGAAACTACTGGCACGAGGAA  850

seq1  AGAGTGTAGTCCTTCAAGATCATCAGCTTTAGTTTCTCCTTTTTT--CCC  898
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  AGAGTGTAGTCCTTCAAGATCATCAGCTTTAGTTTCTCCTTTTTTTCCCC  900

seq1  CTTAACATTGAACCTGAATTTGAAACCACATCTTTTT--GGACAGTCTGT  946
       ||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  TTTAACATTGAACCTGAATTTGAAACCACATCTTTTTTGGGACAGTCTGT  950

seq1  GTGGGGATGAGGCTGACTGTGGATGTATTTATTCGGTGATTTTTAGAACT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGATGAGGCTGACTGTGGATGTATTTATTCGGTGATTTTTAGAACT  1000

seq1  GAACTAATGAACGTAAAGGTATA-TTCTC-TATTGTCCCAGAGACTGTGA  1044
      |||||| ||||||| |||||||| ||||| ||||   |||||||||||||
seq2  GAACTATTGAACGT-AAGGTATATTTCTCTTATTTGTCCAGAGACTGTGA  1049

seq1  TCCGTGTGAAGTGCTAGT-CATTTGTG-TGGTTTCTA-TTTGCATAATT-  1090
      |||||||||||||||||| |||||||| || |||||| ||||||||||| 
seq2  TCCGTGTGAAGTGCTAGTCCATTTGTGTTGCTTTCTATTTTGCATAATTC  1099

seq1  CAAGCTC  1097
      |||||||
seq2  CAAGCTC  1106