BAC Information

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BAC

Clone NameB6Ng01-256G21
Chromosome8 (Build37)
Map Location 74,222,949 - 74,350,434
singlet/doubletdoublet
Overlap geneB3gnt3, Fcho1, EG665991, LOC665996
Upstream geneJund1, 2410018E23Rik, LOC100041434, Pde4c, Rab3a, BC051227, Ifi30, Pik3r2, LOC100041971, Mast3, Il12rb1, Arrdc2, Kcnn1, LOC100042011, Ccdc124, Slc5a5, Rpl18a, Snora68, Mtap1s, LOC100042057, LOC665858, LOC384645, LOC100041583, EG621377, 2410004L22Rik, Myo9b, 2010315L10Rik, Ocel1, Nr2f6, Ushbp1, 5430437P03Rik, Ankrd41, Abhd8, Mrpl34, 1500034J01Rik, Tmem16h, Gtpbp3, Plvap, LOC665928, Bst2, 1110012M11Rik, BC033932, Txnl6, Slc27a1, Pgls, Bcnp1, Glt25d1, Unc13a, Jak3, Insl3, LOC100042289
Downstream geneLOC385024, LOC675190, Zfp709, LOC670453, Zfp617, BC049349, Cyp4f18, LOC666033, Olfr372, Olfr373, Olfr374, Tpm4, Rab8a, Hsh2d, Cib3, 2510049I19Rik, Ap1m1, LOC384840, LOC100042405, Klf2, Eps15l1, Calr3, LOC100042421, 1700030K09Rik, Cherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3, Large
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256G21.bB6Ng01-256G21.g
ACCGA062391GA062392
length1,1691,146
definitionB6Ng01-256G21.b B6Ng01-256G21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,349,275 - 74,350,434)(74,222,949 - 74,224,089)
sequence
gaattcaaatttcaggtcacaaagacaggagaggacacattttgtccttt
ctttttatgtctttccattttgcagagaatgatgatgtgaggtagcaaag
agcagaagataaaagcataacactaagcaggtccccattaaagatttcta
gatactctgggccttttactcatcatgcagaaaggaagcagaggttgctg
aatatcagatagtgtccttagtgatgaagttggtctgaatacagaaacat
tttggggactgtaaatcaagattctgacattagcagacaagtgataaaat
gaataaaatcagtgaaactttaaatcaaaagtaacattgccaattttcct
tataggtgcgaggaaataaaccacctattttccttcctgttcctgggaag
cagggaatttatgtgcttgaggctcctggtgacattgagccaactcaacc
cacaagtgctgctgacagcagggctcctgctgatgctgagccaaattctt
ccacctgtgctgctgtcaatggggctcctgttaatgttgagccaactcct
tcacaacttgcacctgacagtggtgctcctgctgatgttgagccaactca
ttccacctgtgctgctgacaccagggctcctgctgacatagaaccaactc
cttcacaaagtgctcctgacagtactgctccttctgatattgagaaaatt
acttccccatgtccttctgacagttctgaatctgatgaaaaatatgactt
agaaacaggtagtgacattgggttggacttcataactgattcagatttat
acatggagcatgcaaagggccacaccccattgtgacccagagcctactcc
tgatacctgcacttgctgttccctagattccattgaaagaactgacctga
atgttctgacactgcttggagcataagacaagtatgctattctttcttca
ggtgaggaacccaggtcctgttggctgacctagatgaagatatagctgag
gatttttatgacggcttagagtcagcccgatctccactgggcatagcggt
tcccactgtccaagtaacctgggtttttcttggggaacccagaatatgct
acttgctgctggtaatgccttgatgtgattctacattcctgtttccaatg
agtgatgtgaatagaaatc
gaattccaggacagccagggctacacaaagaaaccctgttcccaaaaaaa
acaaagacaaacaaaaaccaaaactcaaaaagcataaaaagccatgggtg
tgtgcccagagacccaatgactaattcctgaatatttgaatagttcctaa
gcccccaagactcacagctgctgtgctatcttgtccaagaagcaaaaaat
aaacagtttgagaactgctcacaaaaccttcttcctgggtgctaggctgg
aaaagggccatgacccatgtcatagacaatattgccctgaaaaacacagt
tcccagacactggctacacaattaattattgaccagttaatattgctgaa
ttcggtcattaattacaacaaactaaccaaatgttaatgagccacagaac
ataagaaaatgttgcttcttctgccgggagtggtggcgcatgcctttaat
cccagcacttgggaggcagaggcaggcggatttctgagtttgagaccagc
ctggtctacagagatagttccaggacagccaaggctacacagagaaactc
tgtctcgaaaaaaaccacacacacacacacacacacacacacacacaaaa
ccacaaaaaaaagaaagaaaagaaaagaaaatgttgcttcttaatgagac
gttgcgtattaattattcactgcatattgatgagccattgcataggaagg
acacattggatactgaagaggcactggctaatcaatgtgtcaaagttgaa
ctggatgcctcatcagtcgacatgcacgcacaggtcgatggccaatgacc
tgacttttggctcacagaccgaggttcatagcgctgctgctgtgactatt
aatgaacttcatcggaatattaatgactttagctaaatattaaatgagat
tcatcttgatattaatgacccatagaatgctcattactatgtgtggttca
aaacactgagtcttaatgatgggcttggttatttctttaatgaatattca
tgagccctggctccccttgccttggggtgaaacggtcttgtgccttggcc
ctgacttggcagccggctttcagaagctactgaagtaagaggaatgacac
gttgctcaagaggccatcagggtgcatactggacccgctcagacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_74349275_74350434
seq2: B6Ng01-256G21.b_47_1215 (reverse)

seq1  GATTTCTAATCCACATCA-TCATTGATAACAGGAATGTAAGAAACCACAT  49
      ||||||| || ||||||| ||||||  ||||||||||||   || |||||
seq2  GATTTCT-ATTCACATCACTCATTGGAAACAGGAATGTA--GAATCACAT  47

seq1  CAAGGGCATTACCAGCAGC-AGTAGCATA-TCT-GGTTCCCAAAGAAAA-  95
      ||| ||||||||||||||| ||||||||| ||| ||||||| ||||||| 
seq2  CAA-GGCATTACCAGCAGCAAGTAGCATATTCTGGGTTCCCCAAGAAAAA  96

seq1  -CCTGG-TACCTGGACAGT-GGACCCGCTATGGCCAGT-GAGATC-GGCT  140
       || || ||| |||||||| ||| |||||||| ||||| |||||| ||||
seq2  CCCAGGTTACTTGGACAGTGGGAACCGCTATGCCCAGTGGAGATCGGGCT  146

seq1  GACTCTAAAGCGTCATAAAAATCCTCAGCTATATCTTCATCTAGGTCAG-  189
      ||||||||  ||||||||||||||||||||||||||||||||||||||| 
seq2  GACTCTAAGCCGTCATAAAAATCCTCAGCTATATCTTCATCTAGGTCAGC  196

seq1  CAACAGGA-CTGGGTTCCTCACCTGAAGAAAGAATAGCATACTTGTCTTA  238
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGACCTGGGTTCCTCACCTGAAGAAAGAATAGCATACTTGTCTTA  246

seq1  TGCTCCAAGCAGTGTCAGAACATTCATGTCAGTTCTTTCAATGGAATCTA  288
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGCTCCAAGCAGTGTCAGAACATTCAGGTCAGTTCTTTCAATGGAATCTA  296

seq1  GGGAACAGCAAGTGCAGGTATCAGGAGTAGGCTCTGGGTCACAATGGGGT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACAGCAAGTGCAGGTATCAGGAGTAGGCTCTGGGTCACAATGGGGT  346

seq1  GTGGCCC-TTGCATGCTCCATGTATAAATCTGAATCAGTTATGAAGTCCA  387
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCCTTTGCATGCTCCATGTATAAATCTGAATCAGTTATGAAGTCCA  396

seq1  ACCCAATGTCACTACCTGTTTCTAAGTCATATTTTTCATCAGATTCAGAA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAATGTCACTACCTGTTTCTAAGTCATATTTTTCATCAGATTCAGAA  446

seq1  CTGTCAGAAGGACATGGGGAAGTAATTTTCTCAATATTAGAAGGAGCAGT  487
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGTCAGAAGGACATGGGGAAGTAATTTTCTCAATATCAGAAGGAGCAGT  496

seq1  ACTGTCAGGAGCACTTTGTGAAGGAGTTGGTTCTATGTCAGCAGGAGCCC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCAGGAGCACTTTGTGAAGGAGTTGGTTCTATGTCAGCAGGAGCCC  546

seq1  TGGTGTCAGCAGCACAGGTGGAATGAGTTGGCTCAACATCAGCAGGAGCA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCAGCAGCACAGGTGGAATGAGTTGGCTCAACATCAGCAGGAGCA  596

seq1  CCACTGTCAGGTGCAAGTTGTGAAGGAGTTGGCTCAACATTAACAGGAGC  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTCAGGTGCAAGTTGTGAAGGAGTTGGCTCAACATTAACAGGAGC  646

seq1  CCCATTGACAGCAGCACAGGTGGAAGAATTTGGCTCAGCATCAGCAGGAG  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGACAGCAGCACAGGTGGAAGAATTTGGCTCAGCATCAGCAGGAG  696

seq1  CCCTGCTGTCAGCAGCACTTGTGGGTTGAGTTGGCTCAATGTCACCAGGA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTGTCAGCAGCACTTGTGGGTTGAGTTGGCTCAATGTCACCAGGA  746

seq1  GCCTCAAGCACATAAATTCCCTGCTTCCCAGGAACAGGAAGGAAAATAGG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAAGCACATAAATTCCCTGCTTCCCAGGAACAGGAAGGAAAATAGG  796

seq1  TGGTTTATTTCCTCGCACCTATAAGGAAAATTGGCAATGTTACTTTTGAT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTATTTCCTCGCACCTATAAGGAAAATTGGCAATGTTACTTTTGAT  846

seq1  TTAAAGTTTCACTGATTTTATTCATTTTATCACTTGTCTGCTAATGTCAG  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTTTCACTGATTTTATTCATTTTATCACTTGTCTGCTAATGTCAG  896

seq1  AATCTTGATTTACAGTCCCCAAAATGTTTCTGTATTCAGACCAACTTCAT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGATTTACAGTCCCCAAAATGTTTCTGTATTCAGACCAACTTCAT  946

seq1  CACTAAGGACACTATCTGATATTCAGCAACCTCTGCTTCCTTTCTGCATG  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGGACACTATCTGATATTCAGCAACCTCTGCTTCCTTTCTGCATG  996

seq1  ATGAGTAAAAGGCCCAGAGTATCTAGAAATCTTTAATGGGGACCTGCTTA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTAAAAGGCCCAGAGTATCTAGAAATCTTTAATGGGGACCTGCTTA  1046

seq1  GTGTTATGCTTTTATCTTCTGCTCTTTGCTACCTCACATCATCATTCTCT  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATGCTTTTATCTTCTGCTCTTTGCTACCTCACATCATCATTCTCT  1096

seq1  GCAAAATGGAAAGACATAAAAAGAAAGGACAAAATGTGTCCTCTCCTGTC  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATGGAAAGACATAAAAAGAAAGGACAAAATGTGTCCTCTCCTGTC  1146

seq1  TTTGTGACCTGAAATTTGAATTC  1160
      |||||||||||||||||||||||
seq2  TTTGTGACCTGAAATTTGAATTC  1169

seq1: chr8_74222949_74224089
seq2: B6Ng01-256G21.g_67_1212

seq1  GAATTCCAGGACAGCCAGGGCTACACAAAGAAACCCTGTTCCCAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTACACAAAGAAACCCTGTTCCCAAAAAAA  50

seq1  ACAAAGACAAACAAAAACCAAAACTCAAAAAGCATAAAAAGCCATGGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGACAAACAAAAACCAAAACTCAAAAAGCATAAAAAGCCATGGGTG  100

seq1  TGTGCCCAGAGACCCAATGACTAATTCCTGAATATTTGAATAGTTCCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCAGAGACCCAATGACTAATTCCTGAATATTTGAATAGTTCCTAA  150

seq1  GCCCCCAAGACTCACAGCTGCTGTGCTATCTTGTCCAAGAAGCAAAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCAAGACTCACAGCTGCTGTGCTATCTTGTCCAAGAAGCAAAAAAT  200

seq1  AAACAGTTTGAGAACTGCTCACAAAACCTTCTTCCTGGGTGCTAGGCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTTTGAGAACTGCTCACAAAACCTTCTTCCTGGGTGCTAGGCTGG  250

seq1  AAAAGGGCCATGACCCATGTCATAGACAATATTGCCCTGAAAAACACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGCCATGACCCATGTCATAGACAATATTGCCCTGAAAAACACAGT  300

seq1  TCCCAGACACTGGCTACACAATTAATTATTGACCAGTTAATATTGCTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGACACTGGCTACACAATTAATTATTGACCAGTTAATATTGCTGAA  350

seq1  TTCGGTCATTAATTACAACAAACTAACCAAATGTTAATGAGCCACAGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGTCATTAATTACAACAAACTAACCAAATGTTAATGAGCCACAGAAC  400

seq1  ATAAGAAAATGTTGCTTCTTCTGCCGGGAGTGGTGGCGCATGCCTTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAAATGTTGCTTCTTCTGCCGGGAGTGGTGGCGCATGCCTTTAAT  450

seq1  CCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGACCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGACCAGC  500

seq1  CTGGTCTACAGAGATAGTTCCAGGACAGCCAAGGCTACACAGAGAAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTACAGAGATAGTTCCAGGACAGCCAAGGCTACACAGAGAAACTC  550

seq1  TGTCTCGAAAAAAACCACACACACACACACACACACACACACACACAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCGAAAAAAACCACACACACACACACACACACACACACACACAAAA  600

seq1  CCACAAAAAAAAGAAAGAAAAGAAAAGAAAATGTTGCTTCTTAATGAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAAAAAAGAAAGAAAAGAAAAGAAAATGTTGCTTCTTAATGAGAC  650

seq1  GTTGCGTATTAATTATTCACTGCATATTGATGAGCCATTGCATAGGAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCGTATTAATTATTCACTGCATATTGATGAGCCATTGCATAGGAAGG  700

seq1  ACACATTGGATACTGAAGAGGCACTGGCTAATCAATGTGTCAAAGTTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTGGATACTGAAGAGGCACTGGCTAATCAATGTGTCAAAGTTGAA  750

seq1  CTGGATGCCTCATCAGTCGACATGCACGCACAGGTCGATGGCCAATGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGCCTCATCAGTCGACATGCACGCACAGGTCGATGGCCAATGACC  800

seq1  TGACTTTTGGCTCACAGACCGAGGTTCATAGCGCTGCTGCTGTGACTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTTGGCTCACAGACCGAGGTTCATAGCGCTGCTGCTGTGACTATT  850

seq1  AATGAACTTCATCGGAATATTAATGACTTTAGCTAAATATT-AATGAGAT  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AATGAACTTCATCGGAATATTAATGACTTTAGCTAAATATTAAATGAGAT  900

seq1  TCATCTTGATATTAATGACCCATAGAATGCTCATTACTATGTGTGGTTC-  948
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCATCTTGATATTAATGACCCATAGAATGCTCATTACTATGTGTGGTTCA  950

seq1  AAACACTGAGTCTTAATGATGGGCTTGGTTATTTCTTT-ATGAATATTCA  997
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAACACTGAGTCTTAATGATGGGCTTGGTTATTTCTTTAATGAATATTCA  1000

seq1  TGAGCCCTGGCTCCCCCTGCCCTGGGTGGAAACGGTCTTGTGCCCTTGGC  1047
      |||||||||||||||| |||| ||||  |||||||||||||| |||||||
seq2  TGAGCCCTGGCTCCCCTTGCCTTGGGGTGAAACGGTCTTGTG-CCTTGGC  1049

seq1  CCTGACTTGGCAG-CGGCCTTCAGAAGGCTACTGAGGT-AGAGGAATGAC  1095
      ||||||||||||| |||| ||||||| |||||||| || |||||||||||
seq2  CCTGACTTGGCAGCCGGCTTTCAGAA-GCTACTGAAGTAAGAGGAATGAC  1098

seq1  ACG-TGCTCAAAGAGG-CATCAGGGTGGATACT-GACACGCTCAGACGT  1141
      ||| ||||| |||||| |||||||||| ||||| ||| |||||||||||
seq2  ACGTTGCTC-AAGAGGCCATCAGGGTGCATACTGGACCCGCTCAGACGT  1146