BAC Information

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BAC

Clone NameB6Ng01-257N13
Chromosome8 (Build37)
Map Location 15,819,834 - 15,820,993
singlet/doubletsinglet
Overlap genenone
Upstream geneDlgap2, Cln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433, Myom2, EG665599, EG234097, EG665619
Downstream geneLOC634008, Csmd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257N13.bB6Ng01-257N13.g
ACCGA063438GA063439
length1,1951,152
definitionB6Ng01-257N13.b B6Ng01-257N13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtactagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
gaaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcaaaagatggaaagatctcccatg
ctcatggattggcaggatcaatattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaaagaagacagcattttcaacaaatggtgctgg
cacaactgggttgttatcatgtagaagaatgcgaatcgatccatacttat
ctcttgtactaggtcaaatctaaatggatcaagacttcacataaccagag
acactgaaactatagaggagaagtggggaaagcttgaagaatgggcacag
gaaaactcttgaacggaacgcatggcctgtgcctgtagatcgaatgacat
aactatgactcagtttctgccgaggcaaagacaccggctccatag
gaattcaaggtaccatcttagcttccttccaacctagtcatctcttcctg
cctcatatctactcaggtttggctaatcagacaccaagaatagtcaaggt
agagtgcaggaatagtagaaaacaaagcttattattctctgttggactag
atttgttgtttctgcatggtgaggaaatcccaaaagtcttttactgagat
gagggaaggagacaagccccagaagcagttagtaagactaaggtggtgat
ggttcagttccctgaggttatgtgttctctcacggggtagaagaaggcag
gagcgtggtagtgtcctgggaactgtaaactcagacctgtcccagctact
gccaagacaatatcacgggtgactagggagcagccactgagccagagact
cctgaccacacgaagtttgatagatccagagagaaggttgctggaatctg
agaccattccctgctagggttgcagactatagctctatatagaggacatg
ggtactactgtgacagtgttcaaagatcatgagaaaaagatcctcttgct
caatggttctgcacctgtgggtcatgacccctttggaggttgaatgaccc
cttttacaagggcctcctaaagccattggaaaacagatatttacattatg
attcataatagtagcaaaattagagttatgaagtagcaacaaaaatagtt
ttatcgttggggatcaccacaacatgaggaactgtcttaaagggttgcag
cctgaggaaagttgagaacctctgtccttgctgcagcaaagcagacccag
ggaaggatcaattcccagagctggagaatgtgaggggccactccttaccc
acaggagcctaaaggaataagatttcatcagtctgtggctacagcttagt
gcccttgcttgcttgttaagcaaatgtcagctttgggttccacaccgaca
ctgagaaatcataattaaaaaatagataaacgatttcagtaatataaaaa
aactaagccaggtagagatgagtccttgctcctagttctggatgtacagt
gactggtcgatgactgacagcagtcagatcttcgaaacacactgtgatgt
gtataacagaaacggtgtggctagaagaaccggccatgttggggaggaac
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_15819834_15820993
seq2: B6Ng01-257N13.g_68_1219 (reverse)

seq1  TGGTTCCTCCCCCAAACCACTGCCCCTTTCTTTCTAGCCACAC--GTTCT  48
      |||||||||||| | |    || ||  ||| ||||||||||||   ||||
seq2  TGGTTCCTCCCCAACA----TGGCCGGTTC-TTCTAGCCACACCGTTTCT  45

seq1  G-TATACCACATCACAGTGTG-TTCGAAGATCTGACCTGCTGTCAGTCAT  96
      | |||| |||||||||||||| ||||||||||||| ||||||||||||||
seq2  GTTATA-CACATCACAGTGTGTTTCGAAGATCTGA-CTGCTGTCAGTCAT  93

seq1  CGACCCAGTCACTGTACCATCCAGAACTAGGGAGCAAGGGACTCATTCTC  146
      ||| |||||||||||| |||||||||||| ||||||| ||||||| ||||
seq2  CGA-CCAGTCACTGTA-CATCCAGAACTA-GGAGCAA-GGACTCA-TCTC  138

seq1  TACCTGGCTTAGTTTTTTTATATTACTGAAATCGTTTATCTATTTTTTAA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGCTTAGTTTTTTTATATTACTGAAATCGTTTATCTATTTTTTAA  188

seq1  TTATGATTTCTCAGTGTCGGTGTTGGAACCCAAGCCTGACATTTGCTTAA  246
      |||||||||||||||||||||| ||||||||||  |||||||||||||||
seq2  TTATGATTTCTCAGTGTCGGTG-TGGAACCCAAAGCTGACATTTGCTTAA  237

seq1  CAAGCAAGCAAGGGCACTAAGCTGTAGCCACAGACTGATGAAATCTTATT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAGCAAGGGCACTAAGCTGTAGCCACAGACTGATGAAATCTTATT  287

seq1  CC-TTAGGCTCCTGTGGGTAAGGAGTGGCCCCTCACATTCTCCAGCTCTG  345
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGGCTCCTGTGGGTAAGGAGTGGCCCCTCACATTCTCCAGCTCTG  337

seq1  GGAATTGATCCTTCCCTGGGTCTGCTTTGCTGCAGCAAGGACAGAGGTTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGATCCTTCCCTGGGTCTGCTTTGCTGCAGCAAGGACAGAGGTTC  387

seq1  TCAACTTTCCTCAGGCTGCAACCCTTTAAGACAGTTCCTCATGTTGTGGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTTCCTCAGGCTGCAACCCTTTAAGACAGTTCCTCATGTTGTGGT  437

seq1  GATCCCCAACGATAAAACTATTTTTGTTGCTACTTCATAACTCTAATTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCCAACGATAAAACTATTTTTGTTGCTACTTCATAACTCTAATTTT  487

seq1  GCTACTATTATGAATCATAATGTAAATATCTGTTTTCCAATGGCTTTAGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTATTATGAATCATAATGTAAATATCTGTTTTCCAATGGCTTTAGG  537

seq1  AGGCCCTTGTAAAAGGGGTCATTCAACCTCCAAAGGGGTCATGACCCACA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTTGTAAAAGGGGTCATTCAACCTCCAAAGGGGTCATGACCCACA  587

seq1  GGTGCAGAACCATTGAGCAAGAGGATCTTTTTCTCATGATCTTTGAACAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAGAACCATTGAGCAAGAGGATCTTTTTCTCATGATCTTTGAACAC  637

seq1  TGTCACAGTAGTACCCATGTCCTCTATATAGAGCTATAGTCTGCAACCCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAGTAGTACCCATGTCCTCTATATAGAGCTATAGTCTGCAACCCT  687

seq1  AGCAGGGAATGGTCTCAGATTCCAGCAACCTTCTCTCTGGATCTATCAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGAATGGTCTCAGATTCCAGCAACCTTCTCTCTGGATCTATCAAA  737

seq1  CTTCGTGTGGTCAGGAGTCTCTGGCTCAGTGGCTGCTCCCTAGTCACCCG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGTGTGGTCAGGAGTCTCTGGCTCAGTGGCTGCTCCCTAGTCACCCG  787

seq1  TGATATTGTCTTGGCAGTAGCTGGGACAGGTCTGAGTTTACAGTTCCCAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTGTCTTGGCAGTAGCTGGGACAGGTCTGAGTTTACAGTTCCCAG  837

seq1  GACACTACCACGCTCCTGCCTTCTTCTACCCCGTGAGAGAACACATAACC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTACCACGCTCCTGCCTTCTTCTACCCCGTGAGAGAACACATAACC  887

seq1  TCAGGGAACTGAACCATCACCACCTTAGTCTTACTAACTGCTTCTGGGGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAACTGAACCATCACCACCTTAGTCTTACTAACTGCTTCTGGGGC  937

seq1  TTGTCTCCTTCCCTCATCTCAGTAAAAGACTTTTGGGATTTCCTCACCAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCCTTCCCTCATCTCAGTAAAAGACTTTTGGGATTTCCTCACCAT  987

seq1  GCAGAAACAACAAATCTAGTCCAACAGAGAATAATAAGCTTTGTTTTCTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAACAACAAATCTAGTCCAACAGAGAATAATAAGCTTTGTTTTCTA  1037

seq1  CTATTCCTGCACTCTACCTTGACTATTCTTGGTGTCTGATTAGCCAAACC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCCTGCACTCTACCTTGACTATTCTTGGTGTCTGATTAGCCAAACC  1087

seq1  TGAGTAGATATGAGGCAGGAAGAGATGACTAGGTTGGAAGGAAGCTAAGA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAGATATGAGGCAGGAAGAGATGACTAGGTTGGAAGGAAGCTAAGA  1137

seq1  TGGTACCTTGAATTC  1160
      |||||||||||||||
seq2  TGGTACCTTGAATTC  1152