BAC Information

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BAC

Clone NameB6Ng01-258E19
Chromosome8 (Build37)
Map Location 107,114,618 - 107,253,070
singlet/doubletdoublet
Overlap gene4833426J09Rik, Cdh16, Rrad, 1110019N10Rik, EG637550, LOC382052, LOC100041473
Upstream geneLOC100041397, LOC667656, Cdh5, Bean, Tk2, Cklf, Cmtm2a, Cmtm2b, Cmtm3, Cmtm4, Dync1li2, Ccdc79, Appbp1, Car7, LOC628007
Downstream geneCes6, LOC628050, 4932416K20Rik, BC015286, Matr3-ps2, Ces2, LOC667754, LOC667760, Ces5, 2310038E17Rik, 2210023G05Rik, LOC436058, EG436059, Es31, EG13909, LOC667774, BC026374, LOC100042408, Cbfb, D230025D16Rik, C76566, Tradd, Fbxl8, Hsf4, Nol3, 4931428F04Rik, Exoc3l, E2f4, Elmo3, Lrrc29, Hspc171, Fhod1, Slc9a5, Plekhg4, Kctd19, Lrrc36, 2700055K07Rik, Zdhhc1, LOC667837, Hsd11b2, Atp6v0d1, Agrp, EG667846, 2310066E14Rik, LOC546100, Ctcf, EG546101, D130029J02Rik, Acd, Pard6a, E130303B06Rik, 4933405L10Rik, Gfod2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258E19.bB6Ng01-258E19.g
ACCGA063774GA063775
length662974
definitionB6Ng01-258E19.b B6Ng01-258E19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,252,409 - 107,253,070)(107,114,618 - 107,115,590)
sequence
gaattcagtctttaaaggcacttataagaaaataatactaaaagagagca
cgtgcatccatacaccagactaacacggggatagggtatgagtatacggg
ttatgagaatgcccaggttccaggaggttgagtttccttgaaactctttg
cctcgtgagtgcttccatgcctcttgtcctgccaagcagatttcactgga
gtgtgcatagcaaccagggaattcatgagctatggggctgagaaatatgc
cattgcttcaatctctcacccaaggagccagctccttcattttctggata
ttctggtgcttttttttcaaggctggactctggtgtcacatctagtggaa
atgtatccgccatttatagaacatcgctcagaggatgttcattgatgatt
ttccaagggttggaacacagggcccccaatggaggagctagagaaagtac
ccaaggagctaaaggggtctgaaaccctgtaggtggaacaacaatatgaa
ctaaccagtacccccagagctcgtgtctctagctgcatatgcagcagaag
atggcctagtcggccatcattgggaagagaggctccttggtcttgcaaac
tttatatgccccagtacaggggaacaccagggccaagaagtgggagtggg
ggggtaggggag
gaattcaaaatggtggttagtaaggagccaatgaactctttagatcagaa
atgtgagtattagaaggttccttctagctgtttgtaaaggaaggaaaatc
ggttgggactaagtgtaatttggaagtagggggccttaaaggctttggag
tctggcattggcaaatggatgggtgggaagggacttaggaggtgggaatg
acaggattaaagtgtgtgacagtaagggaagcatcaaattgaccctggtg
tttggacttgggtcttctggggccggcgaagccattgctggtttaggaag
aaaagcaggtttgactggaagataaggtcagggcaagtagaacctagagt
gtccataaagccttcaagataggtgtccaaagataataaagatgtggcac
tttggagagaggcttggagggaacggaacaaaacccgggaggaatctatg
tgagaatgaactgtaaagaactggagaggtctcttggttctggctttgca
gggtgtggtgataagggaagcttggggaagagccccacgtgacgacctac
tggcgcagcggctgcacaaaagccacgggtaaccccagggggtagagtgc
agggtggcccctcccggccccgcccctctgccttccttttgccctcctca
tccattgggtaatctcaatgtccgtcaagggcccgcctccaaggataagc
caatcaggaatggcgggagggatatttcttttggtgctggttcctcgact
gggggcctctccagggaagtaaaacccagtcgcagcaaccgcggaactgt
gctcaggaccagagtgagccgagaggatccgccgagtgccagcggcgcca
gctggggaggagaggacgaggatacgaggtaaggaaggggacgattcggg
gtgcggacgccttccctagcctagtttaccgggtacctcagtgatggggc
ggagagggggatgaaggtgagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_107252409_107253070
seq2: B6Ng01-258E19.b_50_711 (reverse)

seq1  CTCCCCTACCCCCCCACTCCCACTTCTTGGCCCTGGTGTTCCCCTGTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTACCCCCCCACTCCCACTTCTTGGCCCTGGTGTTCCCCTGTACT  50

seq1  GGGGCATATAAAGTTTGCAAGACCAAGGAGCCTCTCTTCCCAATGATGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATATAAAGTTTGCAAGACCAAGGAGCCTCTCTTCCCAATGATGGC  100

seq1  CGACTAGGCCATCTTCTGCTGCATATGCAGCTAGAGACACGAGCTCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTAGGCCATCTTCTGCTGCATATGCAGCTAGAGACACGAGCTCTGGG  150

seq1  GGTACTGGTTAGTTCATATTGTTGTTCCACCTACAGGGTTTCAGACCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTGGTTAGTTCATATTGTTGTTCCACCTACAGGGTTTCAGACCCCT  200

seq1  TTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGTTC  250

seq1  CAACCCTTGGAAAATCATCAATGAACATCCTCTGAGCGATGTTCTATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTTGGAAAATCATCAATGAACATCCTCTGAGCGATGTTCTATAAA  300

seq1  TGGCGGATACATTTCCACTAGATGTGACACCAGAGTCCAGCCTTGAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGGATACATTTCCACTAGATGTGACACCAGAGTCCAGCCTTGAAAAA  350

seq1  AAAGCACCAGAATATCCAGAAAATGAAGGAGCTGGCTCCTTGGGTGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACCAGAATATCCAGAAAATGAAGGAGCTGGCTCCTTGGGTGAGAG  400

seq1  ATTGAAGCAATGGCATATTTCTCAGCCCCATAGCTCATGAATTCCCTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGCAATGGCATATTTCTCAGCCCCATAGCTCATGAATTCCCTGGT  450

seq1  TGCTATGCACACTCCAGTGAAATCTGCTTGGCAGGACAAGAGGCATGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGCACACTCCAGTGAAATCTGCTTGGCAGGACAAGAGGCATGGAA  500

seq1  GCACTCACGAGGCAAAGAGTTTCAAGGAAACTCAACCTCCTGGAACCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCACGAGGCAAAGAGTTTCAAGGAAACTCAACCTCCTGGAACCTGG  550

seq1  GCATTCTCATAACCCGTATACTCATACCCTATCCCCGTGTTAGTCTGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTCATAACCCGTATACTCATACCCTATCCCCGTGTTAGTCTGGTG  600

seq1  TATGGATGCACGTGCTCTCTTTTAGTATTATTTTCTTATAAGTGCCTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGATGCACGTGCTCTCTTTTAGTATTATTTTCTTATAAGTGCCTTTA  650

seq1  AAGACTGAATTC  662
      ||||||||||||
seq2  AAGACTGAATTC  662

seq1: chr8_107114618_107115590
seq2: B6Ng01-258E19.g_67_1040

seq1  GAATTCAAAATGGTGGTTAGTAAGGAGCCAATGAACTCTTTAGATCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATGGTGGTTAGTAAGGAGCCAATGAACTCTTTAGATCAGAA  50

seq1  ATGTGAGTATTAGAAGGTTCCTTCTAGCTGTTTGTAAAGGAAGGAAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGTATTAGAAGGTTCCTTCTAGCTGTTTGTAAAGGAAGGAAAATC  100

seq1  GGTTGGGACTAAGTGTAATTTGGAAGTAGGGGGCCTTAAAGGCTTTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGACTAAGTGTAATTTGGAAGTAGGGGGCCTTAAAGGCTTTGGAG  150

seq1  TCTGGCATTGGCAAATGGATGGGTGGGAAGGGACTTAGGAGGTGGGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCATTGGCAAATGGATGGGTGGGAAGGGACTTAGGAGGTGGGAATG  200

seq1  ACAGGATTAAAGTGTGTGACAGTAAGGGAAGCATCAAATTGACCCTGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATTAAAGTGTGTGACAGTAAGGGAAGCATCAAATTGACCCTGGTG  250

seq1  TTTGGACTTGGGTCTTCTGGGGCCGGCGAAGCCATTGCTGGTTTAGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACTTGGGTCTTCTGGGGCCGGCGAAGCCATTGCTGGTTTAGGAAG  300

seq1  AAAAGCAGGTTTGACTGGAAGATAAGGTCAGGGCAAGTAGAACCTAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGGTTTGACTGGAAGATAAGGTCAGGGCAAGTAGAACCTAGAGT  350

seq1  GTCCATAAAGCCTTCAAGATAGGTGTCCAAAGATAATAAAGATGTGGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATAAAGCCTTCAAGATAGGTGTCCAAAGATAATAAAGATGTGGCAC  400

seq1  TTTGGAGAGAGGCTTGGAGGGAACGGAACAAAACCCGGGAGGAATCTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGAGAGGCTTGGAGGGAACGGAACAAAACCCGGGAGGAATCTATG  450

seq1  TGAGAATGAACTGTAAAGAACTGGAGAGGTCTCTTGGTTCTGGCTTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGAACTGTAAAGAACTGGAGAGGTCTCTTGGTTCTGGCTTTGCA  500

seq1  GGGTGTGGTGATAAGGGAAGCTTGGGGAAGAGCCCCACGTGACGACCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGGTGATAAGGGAAGCTTGGGGAAGAGCCCCACGTGACGACCTAC  550

seq1  TGGCGCAGCGGCTGCACAAAAGCCACGGGTAACCCCAGGGGGTAGAGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGCAGCGGCTGCACAAAAGCCACGGGTAACCCCAGGGGGTAGAGTGC  600

seq1  AGGGTGGCCCCTCCCGGCCCCGCCCCTCTGCCTTCCTTTTGCCCTCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGCCCCTCCCGGCCCCGCCCCTCTGCCTTCCTTTTGCCCTCCTCA  650

seq1  TCCATTGGGTAATCTCAATGTCCGTCAAGGGCCCGCCTCCAAGGATAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGGGTAATCTCAATGTCCGTCAAGGGCCCGCCTCCAAGGATAAGC  700

seq1  CAATCAGGAATGGCGGGAGGGATATTTCTTTTGGTGCTGGTTCCTCGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGGAATGGCGGGAGGGATATTTCTTTTGGTGCTGGTTCCTCGACT  750

seq1  GGGGGCCTCTCCAGGGAAGTAAAACCCAGTCGCAGCAACCGCGGAACTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCCTCTCCAGGGAAGTAAAACCCAGTCGCAGCAACCGCGGAACTGT  800

seq1  GCTCAGGACCAGAGTGAGCCGAGAGGATCCGCCGAGTGCCAGCGGCGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGACCAGAGTGAGCCGAGAGGATCCGCCGAGTGCCAGCGGCGCCA  850

seq1  GCTGGGGAGGAGAGGACGAGGATACGAGGTAAGGAAGGGGACGATTCGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGAGGAGAGGACGAGGATACGAGGTAAGGAAGGGGACGATTCGGG  900

seq1  GTGCGGACGCCTTCCCTAGCCTAGTTTA-CGGGTACCTCAGGTGATGGGG  949
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  GTGCGGACGCCTTCCCTAGCCTAGTTTACCGGGTACCTCA-GTGATGGGG  949

seq1  CGGAGAGGGGGATG-AGGTGAGAGG  973
      |||||||||||||| ||||||||||
seq2  CGGAGAGGGGGATGAAGGTGAGAGG  974