BAC Information

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BAC

Clone NameB6Ng01-258F14
Chromosome8 (Build37)
Map Location 118,946,618 - 119,118,837
singlet/doubletdoublet
Overlap geneLOC384868, LOC668233, Dynlrb2, Cdyl2
Upstream geneMaf
Downstream geneLOC100043053, 2310061C15Rik, 2610510J17Rik, BC060631, 1700030J22Rik, Gcsh, Pkd1l2, Bcmo1, Gan, 4933407C03Rik, Plcg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258F14.bB6Ng01-258F14.g
ACCGA063808GA063809
length4571,195
definitionB6Ng01-258F14.b B6Ng01-258F14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,118,382 - 119,118,837)(118,946,618 - 118,947,834)
sequence
ggaattcaggcctcctcctcctcctgcccttgtcttgtcttgtgcttgct
tgtccataatatcaacagaagcatggtgagttagcaacacgcctgggtgt
ggacacactctagagcagcgtttgtaaccttcctaatcctacaacccttt
aatacagttcatgttgtgttgacccccaactataaaattgttttcattgc
tacttcataaatgccattttgtcacagttatgaactgtgatgtaaatatc
tgtttttcctatagtcttaggggactcctgtgaaagggtcgtttgacaac
ccccccccaagggggtcatgaccctcaggttgaaatccacctctctagag
ggcctgcccattcaggctggcattgattagatgggatggtatccctggta
catctggcaccctcaggaataaccatgaagtggtggtggtatgtgtgtgt
ggggggg

gaattctagacccacaacgtatccattccccaataatacttccaacattc
taaacagatgggtctcccagcccattctccaccccccaacaatgagcccc
tccagccaaaatctgccaatctgccttactgagtcctctaactccaagaa
agcactggcctcacacttccagctactgcagggctcaaattagtcactct
gtgggacccttccgaagcgtatcagagaccagctgtgcaaaggcctgtca
ccttcttgtcagagaaagttttctgtccaaagaactttcgtcatcgctcc
tttctcaaggagctgggtgtcacttgaagagacagctgaagtcactcaca
atggctggtctcaaatcagcactcactggccttgtcagtaaaagcctcac
cctgcagcaaaaactgtcactgatcatgtttagatatggactctgaggta
ttagattagaagagggaatgcacgagacgggagtgtaaaagaggccaagt
tgcaaaggcagtcttaatgggaaacagtgaaagcttagggctggaaggag
taggagagccttttacccaagcccaatttgtacttcccaacacaatcagg
aagagcagatgtgagcccatgcatgcaagtgtgcacgctcgagcacacac
acacacacacacacacacacacacacacgcacgcacgcacacacgcacac
acgcacacatgcacacatacacacatgcacacatacacacatgcacacac
tcacatgcacacatacacacacatgcacacacacaaatacacacacatac
acacaccagcttcatatacaaagcctactcattcagcggcacatacacat
ctgcactaggcaggagatccctggccatttgctccatccagaagattcca
agggctcatgttcactcccttattagagcactaccaaataatgacagaaa
acaaatattcactcaaaaaaaatctcgactctctcacacaaaagatgaac
actcccttattcatcagatcaccagcgttgtctttcctcttataatatac
tctcattaccagtattttcttcagctaagcatagtgaatatctgggatga
gttatcatctcatacagtataggagcccctcaatcatttgggttaataga
caataccatagtgacaaaaatcatttcccctcgtcgccctccaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_119118382_119118837
seq2: B6Ng01-258F14.b_44_499 (reverse)

seq1  CCCCCCCACACACACATACCACCACCACTTCATGGTTATTCCTGAGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCACACACACATACCACCACCACTTCATGGTTATTCCTGAGGGTG  50

seq1  CCAGATGTACCAGGGATACCATCCCATCTAATCAATGCCAGCCTGAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGTACCAGGGATACCATCCCATCTAATCAATGCCAGCCTGAATGG  100

seq1  GCAGGCCCTCTAGAGAGGTGGATTTCAACCTGAGGGTCATGACCCCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCCCTCTAGAGAGGTGGATTTCAACCTGAGGGTCATGACCCCCTTG  150

seq1  GGGGGGGGTTGTCAAACGACCCTTTCACAGGAGTCCCCTAAGACTATAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGTTGTCAAACGACCCTTTCACAGGAGTCCCCTAAGACTATAGG  200

seq1  AAAAACAGATATTTACATCACAGTTCATAACTGTGACAAAATGGCATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGATATTTACATCACAGTTCATAACTGTGACAAAATGGCATTTA  250

seq1  TGAAGTAGCAATGAAAACAATTTTATAGTTGGGGGTCAACACAACATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAGCAATGAAAACAATTTTATAGTTGGGGGTCAACACAACATGAA  300

seq1  CTGTATTAAAGGGTTGTAGGATTAGGAAGGTTACAAACGCTGCTCTAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTAAAGGGTTGTAGGATTAGGAAGGTTACAAACGCTGCTCTAGAG  350

seq1  TGTGTCCACACCCAGGCGTGTTGCTAACTCACCATGCTTCTGTTGATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCACACCCAGGCGTGTTGCTAACTCACCATGCTTCTGTTGATATT  400

seq1  ATGGACAAGCAAGCACAAGACAAGACAAGGGCAGGAGGAGGAGGAGGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAAGCAAGCACAAGACAAGACAAGGGCAGGAGGAGGAGGAGGCCT  450

seq1  GAATTC  456
      ||||||
seq2  GAATTC  456


seq1: chr8_118946618_118947834
seq2: B6Ng01-258F14.g_65_1259

seq1  GAATTCTAGACCCACAACGTATCCATTCCCCAATAATACTTCCAACATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGACCCACAACGTATCCATTCCCCAATAATACTTCCAACATTC  50

seq1  TAAACAGATGGGTCTCCCAGCCCATTCTCCACCCCCCAACAATGAGCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGATGGGTCTCCCAGCCCATTCTCCACCCCCCAACAATGAGCCCC  100

seq1  TCCAGCCAAAATCTGCCAATCTGCCTTACTGAGTCCTCTAACTCCAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCAAAATCTGCCAATCTGCCTTACTGAGTCCTCTAACTCCAAGAA  150

seq1  AGCACTGGCCTCACACTTCCAGCTACTGCAGGGCTCAAATTAGTCACTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGGCCTCACACTTCCAGCTACTGCAGGGCTCAAATTAGTCACTCT  200

seq1  GTGGGACCCTTCCGAAGCGTATCAGAGACCAGCTGTGCAAAGGCCTGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGACCCTTCCGAAGCGTATCAGAGACCAGCTGTGCAAAGGCCTGTCA  250

seq1  CCTTCTTGTCAGAGAAAGTTTTCTGTCCAAAGAACTTTCGTCATCGCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTGTCAGAGAAAGTTTTCTGTCCAAAGAACTTTCGTCATCGCTCC  300

seq1  TTTCTCAAGGAGCTGGGTGTCACTTGAAGAGACAGCTGAAGTCACTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAAGGAGCTGGGTGTCACTTGAAGAGACAGCTGAAGTCACTCACA  350

seq1  ATGGCTGGTCTCAAATCAGCACTCACTGGCCTTGTCAGTAAAAGCCTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGGTCTCAAATCAGCACTCACTGGCCTTGTCAGTAAAAGCCTCAC  400

seq1  CCTGCAGCAAAAACTGTCACTGATCATGTTTAGATATGGACTCTGAGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGCAAAAACTGTCACTGATCATGTTTAGATATGGACTCTGAGGTA  450

seq1  TTAGATTAGAAGAGGGAATGCACGAGACGGGAGTGTAAAAGAGGCCAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTAGAAGAGGGAATGCACGAGACGGGAGTGTAAAAGAGGCCAAGT  500

seq1  TGCAAAGGCAGTCTTAATGGGAAACAGTGAAAGCTTAGGGCTGGAAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGGCAGTCTTAATGGGAAACAGTGAAAGCTTAGGGCTGGAAGGAG  550

seq1  TAGGAGAGCCTTTTACCCAAGCCCAATTTGTACTTCCCAACACAATCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAGCCTTTTACCCAAGCCCAATTTGTACTTCCCAACACAATCAGG  600

seq1  AAGAGCAGATGTGAGCCCATGCATGCAAGTGTGCACGCTCGAGCACACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGATGTGAGCCCATGCATGCAAGTGTGCACGCTCGAGCACACAC  650

seq1  ACACACACACACACACACACACACACACGCACGCACGCACACACGCACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACGCACGCACGCACACACGCACAC  700

seq1  ACGCACACATGCACACATACACACATGCACACATACACACATGCACACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCACACATGCACACATACACACATGCACACATACACACATGCACACAC  750

seq1  TCACATGCACACATACACACACATGCACACACACAAATACACACACATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGCACACATACACACACATGCACACACACAAATACACACACATAC  800

seq1  ACACACCAGCTTCATATACAAAGCCTACTCATTCAGCAGGCACATACACA  850
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACACACCAGCTTCATATACAAAGCCTACTCATTCAGC-GGCACATACACA  849

seq1  TCTGCACTAGGCAGGAGATCCCTGGCCATTTGCTCCATCCAGAAGATTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACTAGGCAGGAGATCCCTGGCCATTTGCTCCATCCAGAAGATTCC  899

seq1  AAGGGCTCATGTTCACTCCCTTATTAGAGCACTACCAAATAATGACAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTCATGTTCACTCCCTTATTAGAGCACTACCAAATAATGACAGAA  949

seq1  AACAAATATTCACTCAAAAAAAATCTCGACTCTCTCACACAAAAAGATGA  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AACAAATATTCACTCAAAAAAAATCTCGACTCTCTCACAC-AAAAGATGA  998

seq1  AACAACTCCCTTATTCATCAGATCACCAGCGTTGTCTTT-CTC-TAT-AT  1047
      |   ||||||||||||||||||||||||||||||||||| ||| ||| ||
seq2  A--CACTCCCTTATTCATCAGATCACCAGCGTTGTCTTTCCTCTTATAAT  1046

seq1  ATACTCTTCATTTAGGGAAGTA-TTTCTCAGGCTTAGCATTAGTGATATT  1096
      |||||| |||||      |||| |||||   ||| |||| ||||||   |
seq2  ATACTC-TCATT---ACCAGTATTTTCTTCAGCTAAGCA-TAGTGAATAT  1091

seq1  CTGGGATGAGTAATTCAATCTTCATACAAATTATTAGGGGAGGCCCCCTC  1146
      ||||||||||| ||   ||| ||||||     | ||  ||||  ||||||
seq2  CTGGGATGAGTTAT--CATC-TCATAC-----AGTATAGGAG--CCCCTC  1131

seq1  ATTCATGTGTGGTGTTTAATAAGACCATTACCCCATAGTTGACAAAAATC  1196
      | |||| ||    | ||||| |||| ||    |||||| |||||||||||
seq2  AATCATTTG----GGTTAAT-AGACAAT---ACCATAG-TGACAAAAATC  1172

seq1  ATTT-CCCTCGTCG-CCTCCAAA  1217
      |||| ||||||||| ||||||||
seq2  ATTTCCCCTCGTCGCCCTCCAAA  1195


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