BAC Information

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BAC

Clone NameB6Ng01-258G19
Chromosome8 (Build37)
Map Location 37,086,017 - 37,211,940
singlet/doubletdoublet
Overlap geneLOC671641, D8Ertd82e
Upstream geneLOC666792, LOC666797, LOC666804, Ppp1r3b, Thex1, Mfhas1, LOC100041572, Gm501, Cldn23
Downstream geneLonrf1, EG544878, 6430573F11Rik, Dlc1, LOC100042892, A730069N07Rik, AI429214, LOC666877, LOC100041616, 1700016D18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258G19.bB6Ng01-258G19.g
ACCGA063866GA063867
length1,0821,073
definitionB6Ng01-258G19.b B6Ng01-258G19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,210,847 - 37,211,940)(37,086,017 - 37,087,089)
sequence
gaattcatagccattaacaagaaatgagaaactaatgggttcggtagctg
aaaagttattttcagatagagatacaagggccttggacatacttctcttt
gaatgagtcatctctgggtgtatatatggaaagatctatcacttcttaat
tctcttctttctctcccctttagcatgacaataaatattagcttcagtag
aaagcaggtactgatatatgttaaatgaatttgatgggttttgttttgtt
tttgaagacagggtttcactgggtagccctggctgacctggaacttgcta
tgtagactaggctggtcttgaactcacagagatccacctgcctcagcctc
tcaagtgctggggttactatggccagctgttaaatgactttttaaaccaa
aggatccacaagtggatctaaaatagagatctcctattgacatttagacc
accagtgctccgtcttgcactggtcttgtctggcagggaagtgtactcct
tgccatttggccccgcccccacttccttctcttgcctggacaagttgatg
ctgccagagagcagtgcccaagctccctggttgacagatgagcccaggaa
ctgcaggaaagaaacagatgcaacaggaagttctactctccacctctggc
tgcagaggaataatggcgaacacctcctcaagtgcttttgtttgtttttt
tcaatggcctacacgctttccaagaagacagacagtcttggggtctttcc
tttgaactagacaggtggatttgatttccagccaggtctctcaggggaac
aatggtgagagcttaggcaaactggagactagagcagcagggttaaactt
taactcccgtcccccatcccacccaagaatcctaatgtgtgggaagagaa
gtagagaacatttcctcctaccacacacccaggcttcagaaagaactgct
ctaccgtattcaagtgcaagttctgggcctgtgccagatcgtccgctcct
ctgcagtacgtaatagattctactcacaagattctagtgcactcagcact
ggagtaaggcgtgctgcgacgcataaaaacaa
gaattcttccgtgtcctcacagaagccctcagaacataggcatgcattct
aacatgccaggctttgctaggattctggggattgaagctcatatctcttc
actaaactatcaccctggccccaagacagcatccatctaatcacttcata
tcaacccatagtttcatttgcacgcacactaaaatgtgtgattaaataaa
gaaaagacttcatgcgttaatgattcacaatgtataagctagagtatcca
atcctcagagaaatcggctataataatctgtcaagactgtgaaggaacat
gcatcgtgagctgcatcccaactatacctaataaggaagtgtccttatag
aaagagagagatctttacttcatgaagcctatatgattttgtatgagatc
ttgcctttaagaatgtagttacataagccgggcatggtggcgcatgccta
taatcccagcacttgggaggcagaggcaggtggttttctaagttcgaggc
cagcctggtctacagagtgagttccaggagagccagggctacacagagaa
accctgtctcgaaaaaaaaaaaaaaagaagaagaagaagaaagaaagaaa
gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga
aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa
gaaaggaaaagattatggttacatgtgttttctttgattggtggtttagt
ccctgggagctctgtgggtactggttagttcatattgatattcctcctat
gggacttcagacccctttagctccttggatactttctctagctccttcct
tggggaccttgtgctccatcatccaatggatgattgtgagcatccacttt
ctgtatttgccaggtactggcataggccctcaagagacagctatatcagg
ctcctgtcagcaggcttcttgtttggcatctttcatagtgtctgggttgg
tggtagtttatggatgaatcccaggtggggcagtctctggatggttgttt
cctcagtctctcctccgaacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_37210847_37211940
seq2: B6Ng01-258G19.b_48_1129 (reverse)

seq1  TTGTTTTTATTGCGTCGCAAGCAACGCCCTTTAACCTCCAAGTGCTTGAG  50
      ||||||||| |||||||| ||| |||||  |||  |||| ||||| ||||
seq2  TTGTTTTTA-TGCGTCGC-AGC-ACGCC--TTA--CTCC-AGTGC-TGAG  41

seq1  TGCACTAGAATCTTTGTTGAGTAGAATCTATTACGTACTGCAGAGGAGCG  100
      ||||||||||||||   |||||||||||||||||||||||||||||||||
seq2  TGCACTAGAATCTT--GTGAGTAGAATCTATTACGTACTGCAGAGGAGCG  89

seq1  GACGATCTGGCACAGGCCCAGAACTTGCACTTGAATACGGTAGAGCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGATCTGGCACAGGCCCAGAACTTGCACTTGAATACGGTAGAGCAGTT  139

seq1  CTTTCTGAAGCCTGGGTGTGTTGGTAGGAGGAAATGTTCTCTACTTCTCT  200
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTTTCTGAAGCCTGGGTGTG-TGGTAGGAGGAAATGTTCTCTACTTCTCT  188

seq1  TCCCACACATTAGGATTCTTGGGTGGGATGGGGGACGGGAGTTAAAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACACATTAGGATTCTTGGGTGGGATGGGGGACGGGAGTTAAAGTTT  238

seq1  AACCCTGCTGCTCTAGTCTCCAGTTTGCCTAAGCTCTCACCATTGTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGCTGCTCTAGTCTCCAGTTTGCCTAAGCTCTCACCATTGTTCCC  288

seq1  CTGAGAGACCTGGCTGGAAATCAAATCCACCTGTCTAGTTCAAAGGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGACCTGGCTGGAAATCAAATCCACCTGTCTAGTTCAAAGGAAAG  338

seq1  ACCCCAAGACTGTCTGTCTTCTTGGAAAGCGTGTAGGCCATTGAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAGACTGTCTGTCTTCTTGGAAAGCGTGTAGGCCATTGAAAAAAA  388

seq1  CAAACAAAAGCACTTGAGGAGGTGTTCGCCATTATTCCTCTGCAGCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAAGCACTTGAGGAGGTGTTCGCCATTATTCCTCTGCAGCCAGA  438

seq1  GGTGGAGAGTAGAACTTCCTGTTGCATCTGTTTCTTTCCTGCAGTTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGAGTAGAACTTCCTGTTGCATCTGTTTCTTTCCTGCAGTTCCTG  488

seq1  GGCTCATCTGTCAACCAGGGAGCTTGGGCACTGCTCTCTGGCAGCATCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATCTGTCAACCAGGGAGCTTGGGCACTGCTCTCTGGCAGCATCAA  538

seq1  CTTGTCCAGGCAAGAGAAGGAAGTGGGGGCGGGGCCAAATGGCAAGGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCAGGCAAGAGAAGGAAGTGGGGGCGGGGCCAAATGGCAAGGAGT  588

seq1  ACACTTCCCTGCCAGACAAGACCAGTGCAAGACGGAGCACTGGTGGTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCCCTGCCAGACAAGACCAGTGCAAGACGGAGCACTGGTGGTCTA  638

seq1  AATGTCAATAGGAGATCTCTATTTTAGATCCACTTGTGGATCCTTTGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAATAGGAGATCTCTATTTTAGATCCACTTGTGGATCCTTTGGTT  688

seq1  TAAAAAGTCATTTAACAGCTGGCCATAGTAACCCCAGCACTTGAGAGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTCATTTAACAGCTGGCCATAGTAACCCCAGCACTTGAGAGGCT  738

seq1  GAGGCAGGTGGATCTCTGTGAGTTCAAGACCAGCCTAGTCTACATAGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGTGGATCTCTGTGAGTTCAAGACCAGCCTAGTCTACATAGCAA  788

seq1  GTTCCAGGTCAGCCAGGGCTACCCAGTGAAACCCTGTCTTCAAAAACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGGTCAGCCAGGGCTACCCAGTGAAACCCTGTCTTCAAAAACAAA  838

seq1  ACAAAACCCATCAAATTCATTTAACATATATCAGTACCTGCTTTCTACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACCCATCAAATTCATTTAACATATATCAGTACCTGCTTTCTACTG  888

seq1  AAGCTAATATTTATTGTCATGCTAAAGGGGAGAGAAAGAAGAGAATTAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAATATTTATTGTCATGCTAAAGGGGAGAGAAAGAAGAGAATTAAG  938

seq1  AAGTGATAGATCTTTCCATATATACACCCAGAGATGACTCATTCAAAGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATAGATCTTTCCATATATACACCCAGAGATGACTCATTCAAAGAG  988

seq1  AAGTATGTCCAAGGCCCTTGTATCTCTATCTGAAAATAACTTTTCAGCTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGTCCAAGGCCCTTGTATCTCTATCTGAAAATAACTTTTCAGCTA  1038

seq1  CCGAACCCATTAGTTTCTCATTTCTTGTTAATGGCTATGAATTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAACCCATTAGTTTCTCATTTCTTGTTAATGGCTATGAATTC  1082

seq1: chr8_37086017_37087089
seq2: B6Ng01-258G19.g_65_1137

seq1  GAATTCTTCCGTGTCCTCACAGAAGCCCTCAGAACATAGGCATGCATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCGTGTCCTCACAGAAGCCCTCAGAACATAGGCATGCATTCT  50

seq1  AACATGCCAGGCTTTGCTAGGATTCTGGGGATTGAAGCTCATATCTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCCAGGCTTTGCTAGGATTCTGGGGATTGAAGCTCATATCTCTTC  100

seq1  ACTAAACTATCACCCTGGCCCCAAGACAGCATCCATCTAATCACTTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACTATCACCCTGGCCCCAAGACAGCATCCATCTAATCACTTCATA  150

seq1  TCAACCCATAGTTTCATTTGCACGCACACTAAAATGTGTGATTAAATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCATAGTTTCATTTGCACGCACACTAAAATGTGTGATTAAATAAA  200

seq1  GAAAAGACTTCATGCGTTAATGATTCACAATGTATAAGCTAGAGTATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGACTTCATGCGTTAATGATTCACAATGTATAAGCTAGAGTATCCA  250

seq1  ATCCTCAGAGAAATCGGCTATAATAATCTGTCAAGACTGTGAAGGAACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAGAGAAATCGGCTATAATAATCTGTCAAGACTGTGAAGGAACAT  300

seq1  GCATCGTGAGCTGCATCCCAACTATACCTAATAAGGAAGTGTCCTTATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCGTGAGCTGCATCCCAACTATACCTAATAAGGAAGTGTCCTTATAG  350

seq1  AAAGAGAGAGATCTTTACTTCATGAAGCCTATATGATTTTGTATGAGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGAGATCTTTACTTCATGAAGCCTATATGATTTTGTATGAGATC  400

seq1  TTGCCTTTAAGAATGTAGTTACATAAGCCGGGCATGGTGGCGCATGCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTTAAGAATGTAGTTACATAAGCCGGGCATGGTGGCGCATGCCTA  450

seq1  TAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGTTTTCTAAGTTCGAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGTTTTCTAAGTTCGAGGC  500

seq1  CAGCCTGGTCTACAGAGTGAGTTCCAGGAGAGCCAGGGCTACACAGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGTCTACAGAGTGAGTTCCAGGAGAGCCAGGGCTACACAGAGAA  550

seq1  ACCCTGTCTCGAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAAGAAAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCTCGAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAAGAAAGAAA  600

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  650

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  700

seq1  GAAAGGAAAAGATTATGGTTACATGTGTTTTCTTTGATTGGTGGTTTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAAAAGATTATGGTTACATGTGTTTTCTTTGATTGGTGGTTTAGT  750

seq1  CCCTGGGAGCTCTGTGGGTACTGGTTAGTTCATATTGATATTCCTCCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGAGCTCTGTGGGTACTGGTTAGTTCATATTGATATTCCTCCTAT  800

seq1  GGGACTTCAGACCCCTTTAGCTCCTTGGATACTTTCTCTAGCTCCTTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTCAGACCCCTTTAGCTCCTTGGATACTTTCTCTAGCTCCTTCCT  850

seq1  TGGGGACCTTGTGCTCCATCATCCAATGGATGATTGTGAGCATCCAC-TT  899
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGGGGACCTTGTGCTCCATCATCCAATGGATGATTGTGAGCATCCACTTT  900

seq1  CTGTATTTGCCAGGTACTGGCATAGGCCCTCAAGAGACAGCTATATCAGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTGCCAGGTACTGGCATAGGCCCTCAAGAGACAGCTATATCAGG  950

seq1  CTCCTGTCAGCAGGC-TCTTG-TTGGCATCTTCCATAGTGTCTGGGTTTG  997
      ||||||||||||||| ||||| |||||||||| ||||||||||||| |||
seq2  CTCCTGTCAGCAGGCTTCTTGTTTGGCATCTTTCATAGTGTCTGGG-TTG  999

seq1  GTGGTAGTTTATGGGATGGATCCCCAAGTGGGGCAGTCTCTGGATGGTTG  1047
      |||||||||||| ||||| || |||| |||||||||||||||||||||||
seq2  GTGGTAGTTTAT-GGATGAAT-CCCAGGTGGGGCAGTCTCTGGATGGTTG  1047

seq1  TTCCTTCAGTCTCTCCTCCGAACTTT  1073
      || | |||||||||||||||||||||
seq2  TTTCCTCAGTCTCTCCTCCGAACTTT  1073