BAC Information

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BAC

Clone NameB6Ng01-261I15
Chromosome8 (Build37)
Map Location 4,206,230 - 4,206,881
singlet/doubletsinglet
Overlap geneB130050I23Rik
Upstream geneInsr, A430078G23Rik, Arhgef18, Pex11c, 1700019B03Rik, Zfp358, Mcoln1, Pnpla6, C330021F23Rik, 2310057J16Rik, Xab2, Pcp2, Stxbp2, Retn, 1810033B17Rik, LOC664858, Trappc5, Fcer2a, Clec4g, Cd209a, LOC664870, Cd209e, Cd209d, Cd209b, Cd209c, LOC664888, EG384770, EG664905, LOC664915, LOC664922, LOC631071, Cd209f, Cd209g
Downstream geneBC068157, Lrrc8e, Map2k7, LOC100039590, Snapc2, Ctxn1, Timm44, Elavl1, Ccl25, LOC664977, Ppia-ps8_36.1, Lass4, Vmn2r-ps89, EG633533, BC003267, LOC665021, EG623133, EG665044, EG623223, LOC100040234, Shcbp1, EG622568, LOC669393, EG631359, LOC100039687, LOC436026, Slc10a2, LOC434275
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261I15.bB6Ng01-261I15.g
ACCGA066183GA066184
length1,250654
definitionB6Ng01-261I15.b B6Ng01-261I15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaatgcggaataccaaatggctgagatgcacctaaaaaaagt
gttcaacatctttaatcatcagggaaatgcaaatgaaaaccaccctgaga
ttccacctcacaccagtcaggatggctaagataaaaaattcaggtgacag
aagatgctggcgaggatgtggagaaagaggaacactcctccattgctggt
gggattgcaagctggtacaaccactttggcagttcctcaaaaaaattgga
catagtactactagaggatccaggaatacctctcctgggcatatacccag
aagatgttccaactgttaataaggacacatgctcactatgttcatagcag
ccttgtttataatagccagaagctggaaagaacccagatgtccctcaaca
gaggaatggatacagaaaatgtggtacatttacacaaatggagcactact
cagccattaaaaacaatgaatttatgaaattcttaggcaaatggatgtat
ctgtaggatatcatcctgagtgaggtaacccaatcacaaaaggacacaca
tgatatgcacccactgataaatggatattagcccagaaatttagaatacc
caagatacaatttgcaaagcacatgaaactcaagaagaaggaagaccaaa
gtgtgggttactttgtccctccttagaatagggaacaaaatacccatgga
aggagttacagagacaaagtttggagcagagcctgcaggaaagaccatcc
agagactgccctacttggggatccaccccataaacaaccaccaaacccag
tcactatgcaaatgccaacaagagtctgctgacaggagtctgatatagct
gtctcctgcgagtctctgccagtgcctggctaatacagaagtggatgctc
acagtcatccattgaatggagcacatggtccccatgacggagctagagaa
tacccagtgagctgaaggggactgagcccatagatgaacatcaatatgaa
ctaacagcaacccgcagagatcctaggaactattccatcaatcgaagaat
agcacatggtggaacttgtggctcctagcctatgtatcgtagcacagatg
gacgagttccgtcatcgatgggaacgcaaggctctttagttcttgtgaaa
agctcattcgctcaggtatacggaatttcaagaactggatgggatgggta
ggttgaactagagagttacattgactacatcgctagcattcagacgacga

gaattccttactactgtggagcagcaagctcgcggactgctgatctctcc
ctgccagcaatgcgggcctccaggctccccgtgagtgggcccccagcttc
agttgtccaggccctggttgctataaggagtggctagttcatctgcatcg
ctgtctgagctaccttcgctgtccttggctggccgatccaagcttctgaa
gaagcgcgcgtcccggggagagagagggtagagtgggtcctgcagggctg
cgcccacgcccacacccacgcccagcacctcctcatcagaagatggtagc
gaatcctcatccaggtgccgcgttaggctgagcccatcgaaaaccagcgg
ggcctcaaatgtcagtgggcctttcagcaaccgcacctggggtgcgcggg
ggagggtggaggcgcccgcgcgttggagacgtagatcgacatacccagag
aaccccagccatcaggcgccttcctccctcaccctcctagcttcatgctt
tatctgggtccccgcagcagcgtttggcctgtgcccgatatccttttgct
ctcacctcagtcttgagctcctcgatctggtccttcagctcccggatgta
ctgcgatgaatccgagtggttcagctggtcctggatgcggcccctcctcc
ctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_4206230_4206881
seq2: B6Ng01-261I15.g_65_718 (reverse)

seq1  AGAGGGAGGA-GGGCCGCATCCAGGGCCAGCTGAACCACTCGGATTCATC  49
      |||||||||| |||||||||||||| ||||||||||||||||||||||||
seq2  AGAGGGAGGAGGGGCCGCATCCAGGACCAGCTGAACCACTCGGATTCATC  50

seq1  GCAGTACATCCGGGAGCTGAAGGACCAGATCGAGGAGCTCAAGACTGAGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTACATCCGGGAGCTGAAGGACCAGATCGAGGAGCTCAAGACTGAGG  100

seq1  TGAGAGC-AAAGGATATCGGGCACAGGCCAAACGCTGCTGCGGGGACCCA  148
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCAAAAGGATATCGGGCACAGGCCAAACGCTGCTGCGGGGACCCA  150

seq1  GATAAAGCATGAAGCTAGGAGGGTGAGGGAGGAAGGCGCCTGATGGCTGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGCATGAAGCTAGGAGGGTGAGGGAGGAAGGCGCCTGATGGCTGG  200

seq1  GGTTCTCTGGGTATGTCGATCTACGTCTCCAACGCGCGGGCGCCTCCACC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCTGGGTATGTCGATCTACGTCTCCAACGCGCGGGCGCCTCCACC  250

seq1  CTCCCCCGCGCACACCAGGTGCGGTTGCTGAAAGGCCCACCGACATTCGA  298
      ||||||||||||| |||||||||||||||||||||||||| |||||| ||
seq2  CTCCCCCGCGCACCCCAGGTGCGGTTGCTGAAAGGCCCACTGACATTTGA  300

seq1  GGACCCGCTGGCTTTCGATGGGCTCAGCCTAACGCGGCACCTGGATGAGG  348
      || |||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCGCTGGTTTTCGATGGGCTCAGCCTAACGCGGCACCTGGATGAGG  350

seq1  ATTCGCTACCATCTTCTGATGAGGAGCTGCTGGGCGTGGGTGTGGGCGTG  398
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATTCGCTACCATCTTCTGATGAGGAGGTGCTGGGCGTGGGTGTGGGCGTG  400

seq1  GGCGCAGCCCTGCAGGACCCACTCTACCCTCTCTCTCCCCGGGACGCGCG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCAGCCCTGCAGGACCCACTCTACCCTCTCTCTCCCCGGGACGCGCG  450

seq1  CTTCTTCAGAAGCCTGGATCGGCCAGCCAAGGACAGCGAAGGTAGCTCAG  498
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCAGAAGCTTGGATCGGCCAGCCAAGGACAGCGAAGGTAGCTCAG  500

seq1  ACAGCGATGCAGATGAACTAGCCACTCCTTATAGCAACCAGGGCCTGGAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGATGCAGATGAACTAGCCACTCCTTATAGCAACCAGGGCCTGGAC  550

seq1  AACTGAAGCTGGGGGCCCACTCACGGGGAGCCTGGAGGCCCGCATTGCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGCTGGGGGCCCACTCACGGGGAGCCTGGAGGCCCGCATTGCTG  600

seq1  GCAGGGAGAGATCAGCAGTCCGCGAGCTTGCTGCTCCACAGTACTAAGGA  648
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCAGGGAGAGATCAGCAGTCCGCGAGCTTGCTGCTCCACAGTAGTAAGGA  650

seq1  ATTC  652
      ||||
seq2  ATTC  654