BAC Information

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BAC

Clone NameB6Ng01-264L04
Chromosome8 (Build37)
Map Location 54,878,765 - 54,879,950
singlet/doubletsinglet
Overlap genenone
Upstream geneAga, Neil3, LOC100040107
Downstream geneVegfc, Spcs3, Asb5, Spata4, Wdr17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264L04.bB6Ng01-264L04.g
ACCGA068534GA068535
length9961,181
definitionB6Ng01-264L04.b B6Ng01-264L04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaaaagcgccataatgaaacaaatgactag
aaaatagtaaatataaaatggaagcttttaaagagctcatactgttaaaa
gttttcacctaagctatcatttcatcatatgttagcattgctttggacag
aagaccaaggagaagttaaagagccttgataaatgtatcaagagagacaa
gaagaaggaccacgtaaacaagaacagggtacatggaaatgagagaggta
caaagtaaaagtcattagcttaacccaacaatggcaaaataagtag
gaattccttggcaacatttaataaagcccaatctacaaatgcaaagtaga
gtcacatctgaaaattgggatcaaaactagaccaagatagtgcgaaatgg
tgtaagttttgtatccagatctgatagttttaagtacatacatgatacta
cagtggatatacataaggatttttaacaatcacagacgatttaatacagg
agaaaaaaggacataaacgagcatcaagtctgagaggcttttgtatgcat
atatttatttccttcctctacacactaagggaaacttgtctctggatgga
acctctaagttttgttcaattaaatttgcttccaggggagtattatggaa
tggaaaaatctatttatgacgatcacagtcacatttaatatatgagataa
tctttccagcttatggtaaatttggctgatggcaatgttaagtctaagac
accataatcttaatgcacagaagaaaaaaatatttactggagaaattaaa
acatgtctggagaaactaaaaagtaaaatttgttcaataggagggataaa
aggtaaagttgaaaaacttgtcaggtaaagcataaacagcgaaatgttgg
aacattttagagaatcaataactgcctccccactcaaaatgcaaacaaaa
ttagtaaactaatccaggtatgtgcaagtttgataagagaaaaaattaaa
gacacttttcatggataatattgaggaagaattttgggactgctaaagaa
tgtggtgacttttacaaatgggttaatgcatttgatattatgaaatacaa
tagaactttagatgttaaggatgtaattttattattttaagttatgtaat
tggttgtcaagttgaccaaagcaaatttatcagaattaatcttaatggtc
aacttaagaggactgataatcaccatagtaatattaccatgagtgttatt
tatgagagagttcttaaaaagggttaactgcagagggagacaatatcctg
aattgtagatagtgccatagcataggctggggggactgggcttaataaaa
ggaaaagtgactgacatcatcattcatcttctgcttccgacttggaagta
tgtggactactgcctcatcatttgttaacgtaactttgctgacatagtga
gtatcacttctatttttaacaataacacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_54878765_54879950
seq2: B6Ng01-264L04.g_65_1245

seq1  GAATTCCTTGGCAACATTTAATAAAGCCCAATCTACAAATGCAAAGTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGGCAACATTTAATAAAGCCCAATCTACAAATGCAAAGTAGA  50

seq1  GTCACATCTGAAAATTGGGATCAAAACTAGACCAAGATAGTGCGAAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATCTGAAAATTGGGATCAAAACTAGACCAAGATAGTGCGAAATGG  100

seq1  TGTAAGTTTTGTATCCAGATCTGATAGTTTTAAGTACATACATGATACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTTTTGTATCCAGATCTGATAGTTTTAAGTACATACATGATACTA  150

seq1  CAGTGGATATACATAAGGATTTTTAACAATCACAGACGATTTAATACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGATATACATAAGGATTTTTAACAATCACAGACGATTTAATACAGG  200

seq1  AGAAAAAAGGACATAAACGAGCATCAAGTCTGAGAGGCTTTTGTATGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAGGACATAAACGAGCATCAAGTCTGAGAGGCTTTTGTATGCAT  250

seq1  ATATTTATTTCCTTCCTCTACACACTAAGGGAAACTTGTCTCTGGATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATTTCCTTCCTCTACACACTAAGGGAAACTTGTCTCTGGATGGA  300

seq1  ACCTCTAAGTTTTGTTCAATTAAATTTGCTTCCAGGGGAGTATTATGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTAAGTTTTGTTCAATTAAATTTGCTTCCAGGGGAGTATTATGGAA  350

seq1  TGGAAAAATCTATTTATGACGATCACAGTCACATTTAATATATGAGATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAATCTATTTATGACGATCACAGTCACATTTAATATATGAGATAA  400

seq1  TCTTTCCAGCTTATGGTAAATTTGGCTGATGGCAATGTTAAGTCTAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAGCTTATGGTAAATTTGGCTGATGGCAATGTTAAGTCTAAGAC  450

seq1  ACCATAATCTTAATGCACAGAAGAAAAAAATATTTACTGGAGAAATTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAATCTTAATGCACAGAAGAAAAAAATATTTACTGGAGAAATTAAA  500

seq1  ACATGTCTGGAGAAACTAAAAAGTAAAATTTGTTCAATAGGAGGGATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCTGGAGAAACTAAAAAGTAAAATTTGTTCAATAGGAGGGATAAA  550

seq1  AGGTAAAGTTGAAAAACTTGTCAGGTAAAGCATAAACAGCGAAATGTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAGTTGAAAAACTTGTCAGGTAAAGCATAAACAGCGAAATGTTGG  600

seq1  AACATTTTAGAGAATCAATAACTGCCTCCCCACTCAAAATGCAAACAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTAGAGAATCAATAACTGCCTCCCCACTCAAAATGCAAACAAAA  650

seq1  TTAGTAAACTAATCCAGGTATGTGCAAGTTTGATAAGAGAAAAAATTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAAACTAATCCAGGTATGTGCAAGTTTGATAAGAGAAAAAATTAAA  700

seq1  GACACTTTTCATGGATAATATTGAGGAAGAATTTTGGGACTGCTAAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTTTCATGGATAATATTGAGGAAGAATTTTGGGACTGCTAAAGAA  750

seq1  TGTGGTGACTTTTACAAATGGGTTAATGCATTTGATATTATGAAATACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGACTTTTACAAATGGGTTAATGCATTTGATATTATGAAATACAA  800

seq1  TAGAACTTTAGATGTTAAGGATGTAATTTTATTATTTTAAGTTATGTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTTTAGATGTTAAGGATGTAATTTTATTATTTTAAGTTATGTAAT  850

seq1  TGGTTGTCAAGTTGACCAAAGCAAATTTATCAGAATTAATCTTAATGGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTCAAGTTGACCAAAGCAAATTTATCAGAATTAATCTTAATGGTC  900

seq1  AACTTAAGAGGACTGATAATCACCATAGTAATA-TACCATGAGTG-TATT  948
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  AACTTAAGAGGACTGATAATCACCATAGTAATATTACCATGAGTGTTATT  950

seq1  TATGAGAGAGTTC-TAAAAAGGGTTAACTGCAGAGGGAGAC-ATATCCTG  996
      ||||||||||||| ||||||||||||||||||||||||||| ||||||||
seq2  TATGAGAGAGTTCTTAAAAAGGGTTAACTGCAGAGGGAGACAATATCCTG  1000

seq1  AA-TGTAGATAGTGCCATAGCATAGGCTGGGGGGACTGGGCTTAATAAAA  1045
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAGATAGTGCCATAGCATAGGCTGGGGGGACTGGGCTTAATAAAA  1050

seq1  GGGAAAAAGTGACCTGACATCCATCATTCATTCCTTTCTGCTTCCCGACT  1095
      ||  |||||||| ||||||| ||||||||||    |||||||| ||||| 
seq2  GG--AAAAGTGA-CTGACAT-CATCATTCAT---CTTCTGCTT-CCGAC-  1091

seq1  TTGGAAGTATGT-GACTAACTGCCTCATCATTTTGTCACCGTAACTTTGC  1144
      |||||||||||| |||| |||||||||||| ||||| | |||||||||||
seq2  TTGGAAGTATGTGGACT-ACTGCCTCATCA-TTTGTTAACGTAACTTTGC  1139

seq1  TGACATAGTAGATGTATCACTTCTATTTTTA--CATAACACTTT  1186
      ||||||||| || ||||||||||||||||||   ||||||||||
seq2  TGACATAGT-GA-GTATCACTTCTATTTTTAACAATAACACTTT  1181