BAC Information

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BAC

Clone NameB6Ng01-264O04
Chromosome8 (Build37)
Map Location 129,358,392 - 129,359,515
singlet/doubletsinglet
Overlap genenone
Upstream geneE330039K12Rik, BC021891, Kcnk1, Slc35f3, LOC668434, 1810063B05Rik, EG619653, Irf2bp2
Downstream geneTomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3, EG628847
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264O04.bB6Ng01-264O04.g
ACCGA068676GA068677
length5891,128
definitionB6Ng01-264O04.b B6Ng01-264O04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
caaacatcacatacctgtaaaaactatgtgcagctggcaaaacctctaac
agaggctagagcatgaggcaaatcacagtcagttgctggggacagtctga
atagagcatgaggcaaatcacagttgctggggacaatctgaagcaacccc
acatcccacacctgagatgaagacagaaacatgttcttataatagttctg
tgtttttcaaagagaccaaaattctcactacagtggatttaacgaaaagg
ctcccataggctcatagggagtggctagtaggtgtggcttttggggggca
ggtgtgtccttaatggagcaagcttgtctcagttctctcttaaatattgt
cctttgtaagagttgctatggtcatgatgtctcttcacagtaatacaaac
cctaactaagacaagttagttttaggattatacttagagttagggttaaa
aatggagttggggttagaacttctgttagagttaagttatggcatgtggt
cagtaataatgttatgtttagagttaggtttaggattaaggctattatca
atgttagtgttggtgttagaattgagtagggttagggtt
gaattccagacttctcacacaggcacagtagacatttttaatctcaacaa
tactccatgacaaactgatctactttctcgtatggaaagtgtcctgttct
accaccgtgtttttggattaataatgttgggagagccagcccatcaatat
gagtatgaagtaaaagcggaattgctttttggctctttcaacgtggtcat
cggggctgctaggcccaagttatcctgcctgactgcaacagatttgctgg
acagtttgctggacagatgctcacatcccctcttgcttgggctgtgtaga
ccacagctgccacactagagggacattaccgattcttttctttaatgcca
ccaacaagaccatgtacccaccaggcctgcctctaggactgtgtagcaac
aggccctcctctgccctcctaggctgagcatctgcataccaattaggata
ctaagaaatgggtgcttctgttgaggaatagtgcgtgaagtggatctccc
cgtcacttctgggggactcctgaggtttgttaccagccctgttgactaaa
aatgtctgaagatattcttaaaggcatggcctctggttctttgcaaatta
attttaagttctcattgtggaaaatttcaagtatgtcagaagaaagaaac
ccagcacctctaagttctctccgtggctcacaaggaaaggaccagagcat
ctccaaacttgctttctgttttgcttctcacatgttcccacagttttgaa
attgcttttaagaaaacctcacatggaaaaagaaaaatttcaggagacaa
caaggtaacttaagtgggtgaaggcgcttgccaccagagccaggggctcg
gatttgatctgccatcaccacgccacgaaagggttacactgactccccca
agttgttctctgacctccacacatttgctgagacacatataactgtgtgt
gaaggtatatgtgtctcagcaaatttatttaatttttttatgtgtgtaag
gtgtttcatctgtctgtctgtctgtctgtctgtctggtgtacatgtcaat
gcctagtgcctggggaagccagaatggggcactagatctcgtagccactt
gagttacaggcagttgtgagccaacatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_129358392_129359515
seq2: B6Ng01-264O04.g_67_1194

seq1  GAATTCCAGACTTCTCACACAGGCACAGTAGACATTTTTAATCTCAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACTTCTCACACAGGCACAGTAGACATTTTTAATCTCAACAA  50

seq1  TACTCCATGACAAACTGATCTACTTTCTCGTATGGAAAGTGTCCTGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCATGACAAACTGATCTACTTTCTCGTATGGAAAGTGTCCTGTTCT  100

seq1  ACCACCGTGTTTTTGGATTAATAATGTTGGGAGAGCCAGCCCATCAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCGTGTTTTTGGATTAATAATGTTGGGAGAGCCAGCCCATCAATAT  150

seq1  GAGTATGAAGTAAAAGCGGAATTGCTTTTTGGCTCTTTCAACGTGGTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATGAAGTAAAAGCGGAATTGCTTTTTGGCTCTTTCAACGTGGTCAT  200

seq1  CGGGGCTGCTAGGCCCAAGTTATCCTGCCTGACTGCAACAGATTTGCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGCTGCTAGGCCCAAGTTATCCTGCCTGACTGCAACAGATTTGCTGG  250

seq1  ACAGTTTGCTGGACAGATGCTCACATCCCCTCTTGCTTGGGCTGTGTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTGCTGGACAGATGCTCACATCCCCTCTTGCTTGGGCTGTGTAGA  300

seq1  CCACAGCTGCCACACTAGAGGGACATTACCGATTCTTTTCTTTAATGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCTGCCACACTAGAGGGACATTACCGATTCTTTTCTTTAATGCCA  350

seq1  CCAACAAGACCATGTACCCACCAGGCCTGCCTCTAGGACTGTGTAGCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAGACCATGTACCCACCAGGCCTGCCTCTAGGACTGTGTAGCAAC  400

seq1  AGGCCCTCCTCTGCCCTCCTAGGCTGAGCATCTGCATACCAATTAGGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTCCTCTGCCCTCCTAGGCTGAGCATCTGCATACCAATTAGGATA  450

seq1  CTAAGAAATGGGTGCTTCTGTTGAGGAATAGTGCGTGAAGTGGATCTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAATGGGTGCTTCTGTTGAGGAATAGTGCGTGAAGTGGATCTCCC  500

seq1  CGTCACTTCTGGGGGACTCCTGAGGTTTGTTACCAGCCCTGTTGACTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCACTTCTGGGGGACTCCTGAGGTTTGTTACCAGCCCTGTTGACTAAA  550

seq1  AATGTCTGAAGATATTCTTAAAGGCATGGCCTCTGGTTCTTTGCAAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGAAGATATTCTTAAAGGCATGGCCTCTGGTTCTTTGCAAATTA  600

seq1  ATTTTAAGTTCTCATTGTGGAAAATTTCAAGTATGTCAGAAGAAAGAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGTTCTCATTGTGGAAAATTTCAAGTATGTCAGAAGAAAGAAAC  650

seq1  CCAGCACCTCTAAGTTCTCTCCGTGGCTCACAAGGAAAGGACCAGAGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACCTCTAAGTTCTCTCCGTGGCTCACAAGGAAAGGACCAGAGCAT  700

seq1  CTCCAAACTTGCTTTCTGTTTTGCTTCTCACATGTTCCCACAGTTTTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAACTTGCTTTCTGTTTTGCTTCTCACATGTTCCCACAGTTTTGAA  750

seq1  ATTGCTTTTAAGAAAACCTCACATGGAAAAAGAAAAATTTCAGGAGACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTTAAGAAAACCTCACATGGAAAAAGAAAAATTTCAGGAGACAA  800

seq1  CAAGGTAACTTAAGTGGGTGAAGGCGCTTGCCACCAGAGCCAGGGGCTCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTAACTTAAGTGGGTGAAGGCGCTTGCCACCAGAGCCAGGGGCTCG  850

seq1  GATTTGATCTGCCATCACCACGCCACGAAAGGGTTACACTGACTCCCCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGATCTGCCATCACCACGCCACGAAAGGGTTACACTGACTCCCCCA  900

seq1  AGTTGTTCTCTGACCTCCACACATTTGCTGAGACACATATAACTGTGTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTCTCTGACCTCCACACATTTGCTGAGACACATATAACTGTGTGT  950

seq1  G-AGGTATATGTGTCTCAGCAAATTTATTT-ATTTTTTTATGTGTGT-AG  997
      | |||||||||||||||||||||||||||| |||||||||||||||| ||
seq2  GAAGGTATATGTGTCTCAGCAAATTTATTTAATTTTTTTATGTGTGTAAG  1000

seq1  GTGTTTCATCTGTCTGTCTGTCTGTCTGTCTGTCT-GTGTACCATGTCCA  1046
      ||||||||||||||||||||||||||||||||||| ||||| |||||| |
seq2  GTGTTTCATCTGTCTGTCTGTCTGTCTGTCTGTCTGGTGTA-CATGTCAA  1049

seq1  TGCCTAGTGCCTGGGGAAGCCAGAAAGGGGCACTAGATCTCGTAG-CACT  1095
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  TGCCTAGTGCCTGGGGAAGCCAGAATGGGGCACTAGATCTCGTAGCCACT  1099

seq1  GGAGTTACAGGCAGTTGTGAGCCACCATG  1124
       ||||||||||||||||||||||| ||||
seq2  TGAGTTACAGGCAGTTGTGAGCCAACATG  1128