BAC Information

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BAC

Clone NameB6Ng01-265F21
Chromosome8 (Build37)
Map Location 127,817,434 - 127,923,287
singlet/doubletdoublet
Overlap genenone
Upstream geneGalnt2, Pgbd5, Cog2, Agt, Capn9, 2310022B05Rik, Ttc13, Arv1, 2310031A18Rik, LOC668444, Trim67, 2810004N23Rik, Gnpat, Exoc8, Gm505, Egln1, Tsnax, Disc1
Downstream geneSipa1l2, 4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891, Kcnk1, Slc35f3, LOC668434
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265F21.bB6Ng01-265F21.g
ACCGA069038GA069039
length1,0581,075
definitionB6Ng01-265F21.b B6Ng01-265F21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,817,434 - 127,818,489)(127,922,195 - 127,923,287)
sequence
gaattcagcaaggagcagctggcagtcaggatgcagcaaagagctaatca
ggcaggaagtgggagcactcaggcaggaagtgggagcaggctattgctca
gaagccaaatgcccatgctcttatacctaccagctagtctttaagtctag
aaggttccacagtgttcctcaaacagcaccgccaggtgaagaccaaatgt
tcaaacacatggggacatttcactttcaaacacttcagaccactggtcct
tgtcgtagacttgtggggtgggcacagtagctagacgcatacaagaggaa
ggcactgggctttgttccatccttcaaagggaagttaagctctcctgctg
cagatgaatgggtgatggtgtcttagcttaagctgtcagggaagaaactt
cacttggcgtcagggtgatagttcccccctcccccattgtatttgtcctt
gtgttgtgaggcactgtagccaaagatgcatgaaggactgatgtcaatcc
tgctgtgctgtgtactatgtgagtagaaagaaaggaagaaagaaagagag
agagagaaagaaagaaagaaagaaagaaagggagatggaaggaagcaagg
aaggaagggagaaggaaggaaggaggaaagaaggaagttatgatagtttc
aaagcaaagcaaagcttgcacagtaccagctagtccacatccacacccaa
tgatgtgagaaatcctcagaagggaaggagcacagagcaaagagagcccc
gagggaaggtcccacagcctggggccagcactgtaacatctgctggttcc
acagagaaaatgaggtagaaaactgtgtttgcaaagtattctgtgtgact
ttgattttttttttaatatcctatgtgaaaaacacacaccttgcaccctg
aattctggcttcttccgagggtaagcttggcttgctacaactgtgacatc
ttcctacttctgtgtgcttccctctgtcacttggcctggatacctcactt
cactcacggctccgtgaagacatcaagacgttgaaggactgagactctcg
tgattgtc
gaattcctgtcctgacttctatcaatgaaggactagggcctggaaataaa
aggcaaagaaatcctgtacttacagcagagggccaaaatcactgggtggg
aaggaaaaattaccataatccccttcaggtcaatccagaagtcacaaggt
agaaagatccctccgtcaccacgtagtaagatgtcacttagaaagcccaa
aacttcctatgaggctgagcctagaagtctcgttccaacagccaggaagg
aagactgtagtttttctatgagtctgtctttatccatcttccctccctgc
cctgctaggctctgactaaaaattccggaaggatgccagctcccaaagtg
attggatctggagtcgatgacgaataataacgcctgctgttattaactgc
aggcgtgttgctcctgggacggtttatttatttattttattttggctcgt
tttttgatatatcgtcctgatctaaatcaagagaatgtgttcttccgtct
ggtacagcccctgaagtctgcagtgaatggaactcccacctctgacgaag
caaccagcttcttcatggttggcaggtgaataaatcggcttttactggga
gccattaaatatggtctggggttgatttactccctgctggcttgcgtgga
agtggagtacagaatacagcaggccaatagcaggcatcttttattctttt
tttttttttttttttctgagacagggtttctcagtatagccctggctgtc
ctggaattttattcttaattaattacagctcattggggagacctgagcag
catccgtgggtgttgggtgggacgcccgggttcttgggcctgtagcagca
cgtcttgcctcttttctgttgagatgcgtagtgcctgagcacccccggga
ggaaacggcctttgcctacctgtctgttgaggtgactaaaggactatggt
catcctgacacagtttactgactctgctcctctagtaaggtccaccgtcc
tccctgtctcactgtctcttcatccgcaggtgtcctcagtatctgtagga
gcagccactaaggaagagtggatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_127817434_127818489
seq2: B6Ng01-265F21.b_45_1102

seq1  GAATTCAGCAAGGAGCAGCTGGCAGTCAGGATGCAGCAAAGAGCTAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAAGGAGCAGCTGGCAGTCAGGATGCAGCAAAGAGCTAATCA  50

seq1  GGCAGGAAGTGGGAGCACTCAGGCAGGAAGTGGGAGCAGGCTATTGCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAAGTGGGAGCACTCAGGCAGGAAGTGGGAGCAGGCTATTGCTCA  100

seq1  GAAGCCAAATGCCCATGCTCTTATACCTACCAGCTAGTCTTTAAGTCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAAATGCCCATGCTCTTATACCTACCAGCTAGTCTTTAAGTCTAG  150

seq1  AAGGTTCCACAGTGTTCCTCAAACAGCACCGCCAGGTGAAGACCAAATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCCACAGTGTTCCTCAAACAGCACCGCCAGGTGAAGACCAAATGT  200

seq1  TCAAACACATGGGGACATTTCACTTTCAAACACTTCAGACCACTGGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACACATGGGGACATTTCACTTTCAAACACTTCAGACCACTGGTCCT  250

seq1  TGTCGTAGACTTGTGGGGTGGGCACAGTAGCTAGACGCATACAAGAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGTAGACTTGTGGGGTGGGCACAGTAGCTAGACGCATACAAGAGGAA  300

seq1  GGCACTGGGCTTTGTTCCATCCTTCAAAGGGAAGTTAAGCTCTCCTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGGGCTTTGTTCCATCCTTCAAAGGGAAGTTAAGCTCTCCTGCTG  350

seq1  CAGATGAATGGGTGATGGTGTCTTAGCTTAAGCTGTCAGGGAAGAAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAATGGGTGATGGTGTCTTAGCTTAAGCTGTCAGGGAAGAAACTT  400

seq1  CACTTGGCGTCAGGGTGATAGTTCCCCCCTCCCCCATTGTATTTGTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGCGTCAGGGTGATAGTTCCCCCCTCCCCCATTGTATTTGTCCTT  450

seq1  GTGTTGTGAGGCACTGTAGCCAAAGATGCATGAAGGACTGATGTCAATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTGAGGCACTGTAGCCAAAGATGCATGAAGGACTGATGTCAATCC  500

seq1  TGCTGTGCTGTGTACTATGTGAGTAGAAAGAAAGGAAGAAAGAAAGAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGCTGTGTACTATGTGAGTAGAAAGAAAGGAAGAAAGAAAGAGAG  550

seq1  AGAGAGAAAGAAAGAAAGAAAGAAAGAAAGGGAGATGGAAGGAAGCAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAAGAAAGAAAGAAAGAAAGAAAGGGAGATGGAAGGAAGCAAGG  600

seq1  AAGGAAGGGAGAAGGAAGGAAGGAGGAAAGAAGGAAGTTATGATAGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGGAGAAGGAAGGAAGGAGGAAAGAAGGAAGTTATGATAGTTTC  650

seq1  AAAGCAAAGCAAAGCTTGCACAGTACCAGCTAGTCCACATCCACACCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAGCAAAGCTTGCACAGTACCAGCTAGTCCACATCCACACCCAA  700

seq1  TGATGTGAGAAATCCTCAGAAGGGAAGGAGCACAGAGCAAAGAGAGCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGAGAAATCCTCAGAAGGGAAGGAGCACAGAGCAAAGAGAGCCCC  750

seq1  GAGGGAAGGTCCCACAGCCTGGGGCCAGCACTGTAACATCTGCTGGTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAGGTCCCACAGCCTGGGGCCAGCACTGTAACATCTGCTGGTTCC  800

seq1  ACAGAGAAAATGAGGTAGAAAACTGTG-TTGCAAAGTATTCTGTGTGACT  849
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACAGAGAAAATGAGGTAGAAAACTGTGTTTGCAAAGTATTCTGTGTGACT  850

seq1  TTGATTTTTTTTTTAATATCCTATGTGAAAAACACACACC-TGCACCCTG  898
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGATTTTTTTTTTAATATCCTATGTGAAAAACACACACCTTGCACCCTG  900

seq1  AATTCTGGCTTCTTCCGAGGGTAAGCTTGGCTTGCTACAACTGTGACATC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGCTTCTTCCGAGGGTAAGCTTGGCTTGCTACAACTGTGACATC  950

seq1  TTCCTTACTTCTGTGTGCTTCCCTCTGTCACTTGGCCTGGATA-CTCAC-  996
      |||| |||||||||||||||||||||||||||||||||||||| ||||| 
seq2  TTCC-TACTTCTGTGTGCTTCCCTCTGTCACTTGGCCTGGATACCTCACT  999

seq1  TCACTCACGGCTCCGTGAAGACATCAGGACGTTGGAAGGACTGAGGACTC  1046
      |||||||||||||||||||||||||| |||||| |||||||||| |||||
seq2  TCACTCACGGCTCCGTGAAGACATCAAGACGTT-GAAGGACTGA-GACTC  1047

seq1  -CGTGATTGTC  1056
       ||||||||||
seq2  TCGTGATTGTC  1058

seq1: chr8_127922195_127923287
seq2: B6Ng01-265F21.g_66_1140 (reverse)

seq1  TCATCCCACTCTTCCCCTAGGTGCTGCTCCCTTTACAGATAACCTGAAGA  50
      |||| |||||||| || |||  ||||||||   ||||||||  ||||   
seq2  TCAT-CCACTCTT-CCTTAGTGGCTGCTCC---TACAGATA--CTGA--G  41

seq1  GACACTTGCGGATGGAAGAGACAGTGAGGACAGGGAGGACGGT-GACCTT  99
      ||||| ||||||| ||||||||||||| ||||||||||||||| ||||||
seq2  GACACCTGCGGAT-GAAGAGACAGTGA-GACAGGGAGGACGGTGGACCTT  89

seq1  ACTAGA-GAGCAAGAAGTCAAGTAAACCTGTGTTCAAGGATGACCATAGT  148
      |||||| |||||   |||| |||||| ||||||   ||||||||||||| 
seq2  ACTAGAGGAGCA--GAGTC-AGTAAA-CTGTGT--CAGGATGACCATAG-  132

seq1  TCCTTTAGTTCACCCTCAACAGACAGGTAGGCAAAGGCCGTTTCCTCCCG  198
      |||||||| ||| |||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAG-TCA-CCTCAACAGACAGGTAGGCAAAGGCCGTTTCCTCCCG  180

seq1  GGGGTGCTCAGGCACTACGCATCTCAACAGAAAAGAGGCAAGACGTGCTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGCTCAGGCACTACGCATCTCAACAGAAAAGAGGCAAGACGTGCTG  230

seq1  CTACAGGCCCAAGAACCCGGGCGTCCCACCCAACACCCACGGATGCTGCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGGCCCAAGAACCCGGGCGTCCCACCCAACACCCACGGATGCTGCT  280

seq1  CAGGTCTCCCCAATGAGCTGTAATTAATTAAGAATAAAATTCCAGGACAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTCCCCAATGAGCTGTAATTAATTAAGAATAAAATTCCAGGACAG  330

seq1  CCAGGGCTATACTGAGAAACCCTGTCTCAGAAAAAAAAAAAAAAAAAAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCTATACTGAGAAACCCTGTCTCAGAAAAAAAAAAAAAAAAAAAG  380

seq1  AATAAAAGATGCCTGCTATTGGCCTGCTGTATTCTGTACTCCACTTCCAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGATGCCTGCTATTGGCCTGCTGTATTCTGTACTCCACTTCCAC  430

seq1  GCAAGCCAGCAGGGAGTAAATCAACCCCAGACCATATTTAATGGCTCCCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCCAGCAGGGAGTAAATCAACCCCAGACCATATTTAATGGCTCCCA  480

seq1  GTAAAAGCCGATTTATTCACCTGCCAACCATGAAGAAGCTGGTTGCTTCG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGCCGATTTATTCACCTGCCAACCATGAAGAAGCTGGTTGCTTCG  530

seq1  TCAGAGGTGGGAGTTCCATTCACTGCAGACTTCAGGGGCTGTACCAGACG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGTGGGAGTTCCATTCACTGCAGACTTCAGGGGCTGTACCAGACG  580

seq1  GAAGAACACATTCTCTTGATTTAGATCAGGACGATATATCAAAAAACGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACACATTCTCTTGATTTAGATCAGGACGATATATCAAAAAACGAG  630

seq1  CCAAAATAAAATAAATAAATAAACCGTCCCAGGAGCAACACGCCTGCAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATAAAATAAATAAATAAACCGTCCCAGGAGCAACACGCCTGCAGT  680

seq1  TAATAACAGCAGGCGTTATTATTCGTCATCGACTCCAGATCCAATCACTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACAGCAGGCGTTATTATTCGTCATCGACTCCAGATCCAATCACTT  730

seq1  TGGGAGCTGGCATCCTTCCGGAATTTTTAGTCAGAGCCTAGCAGGGCAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCTGGCATCCTTCCGGAATTTTTAGTCAGAGCCTAGCAGGGCAGG  780

seq1  GAGGGAAGATGGATAAAGACAGACTCATAGAAAAACTACAGTCTTCCTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAGATGGATAAAGACAGACTCATAGAAAAACTACAGTCTTCCTTC  830

seq1  CTGGCTGTTGGAACGAGACTTCTAGGCTCAGCCTCATAGGAAGTTTTGGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGTTGGAACGAGACTTCTAGGCTCAGCCTCATAGGAAGTTTTGGG  880

seq1  CTTTCTAAGTGACATCTTACTACGTGGTGACGGAGGGATCTTTCTACCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAAGTGACATCTTACTACGTGGTGACGGAGGGATCTTTCTACCTT  930

seq1  GTGACTTCTGGATTGACCTGAAGGGGATTATGGTAATTTTTCCTTCCCAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTCTGGATTGACCTGAAGGGGATTATGGTAATTTTTCCTTCCCAC  980

seq1  CCAGTGATTTTGGCCCTCTGCTGTAAGTACAGGATTTCTTTGCCTTTTAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGATTTTGGCCCTCTGCTGTAAGTACAGGATTTCTTTGCCTTTTAT  1030

seq1  TTCCAGGCCCTAGTCCTTCATTGATAGAAGTCAGGACAGGAATTC  1093
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGCCCTAGTCCTTCATTGATAGAAGTCAGGACAGGAATTC  1075