BAC Information

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BAC

Clone NameB6Ng01-270G08
Chromosome8 (Build37)
Map Location 66,132,253 - 66,133,394
singlet/doubletsinglet
Overlap genenone
Upstream geneSpock3
Downstream geneLOC384831, EG244495, Tll1, LOC100040989, Cpe
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270G08.bB6Ng01-270G08.g
ACCGA072747GA072748
length1,1251,191
definitionB6Ng01-270G08.b B6Ng01-270G08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctcatgtcttcttcaagatccatatatgccttgtgtatgaaa
tgttgatttccaaacatagtccaactatatagaagttcattaggatgcat
tgagttggaccagggctgggcttgtttgcttcagtgtagctgtagggtgt
ttttatctgccagattctttcaataaagtaattttcatttctaaaaaaat
tttagctcaattcattacagtttatttccctttaattctagcattagctt
ttaccttaagagaccattttcatttaaaatttgtcacaatactattattt
atggcaactatgtatgttttatcagtttcaattctgtggcactgtgggtc
aggcagtgattttctagtcttgtgtatactgttcttcacaattctaaact
gtagcccattaaaattatccccaggagtctcatattgcaaatcacggtta
tggaaattgaggggaattatgctcacattatttctgctctcattcattaa
ttgaattgttcctattctttttgcagtaccaaatgccaatgtcttatttg
caagattattttaataataatgatttaataaactgtggaaatgatataaa
tgtgaccattcttatgtttggcaagaaagagagaaggataaagagtgaag
gagagagaaataactggaatactgacatgttttataatatccagttcatt
gctacaactttcacctgaatccattattagtaattgatggggaaaactgg
aggggatccataatgcatcacaagggaattagaaagatgtaagggagtga
gggagcaagcaagcgagctcaacagttaagaatgcatgctgctcttgcag
aggaccctaggttgattccaagcatctacactgggcagttcaaaacttcc
tgtactccagtttgagggaatctatgaacctcagctgacctccatgtgta
cctgtgtacattttcatgtatgcacacatgggggtatagagaggagaaca
cctgagggtaatgtgtgctatcagagcagttctcacaaacttgcagatat
tcatggcccagactcatgagctcagatacagtaaaacaaaacatgcacta
aagtgatctcagctctctagaagaa
gaattctcacctgaggaataccgaatggcagaaaaacacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccttgaggt
tccacttcacaccagtcagaatggctaagatcaaaagttcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaacccctctggaagtcagtctggtggttcctta
gaaaattggacatagtactactggaggattccccaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctgaaaagtacccagaa
gcctttcgacagtggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggataatagcccagaaac
ttaggatacccaagatataagatacaatttgctaaatgcatgaaactcaa
gaaaaatgaagaccaaagtgtggacactttgccccttcttagaattagga
acaaaacacccatggaaggagttacagagacaaagtttggatctgtgatg
aaaggattgaccatctagagactgccatatccggggatccatcccataat
cagcttccaaacgctgacaccattgcataccctagcaagattttgctgaa
aggacccagatagatctgtctcttgtgagactaggctggggcctagcaaa
cacagaagtggacgctcacagtcatctattagatggaccacggggccccc
agtggaggagctagagaaagtacccaaggagctaaaggatctgcaatcct
atagtgaaaacaatatgaactaccagtacctccctgagctcgtgtctcta
gctgcatattttatcaaaatgctgtaagacttattcagtgaaagaagagg
tccaattgcgtgcaacttaaccctggctcagtacaggaactccagggaca
agcatggaagtgatggttgcgttgtgtgcaagagtactcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_66132253_66133394
seq2: B6Ng01-270G08.b_41_1165 (reverse)

seq1  TTCTTCTAGAGAGCTGAGGATCAACTTTAAGTGCCAATGTTTTGTTTTAA  50
      ||||||||||||||||| |||| ||||| |||||  ||||||||||||| 
seq2  TTCTTCTAGAGAGCTGA-GATC-ACTTT-AGTGC--ATGTTTTGTTTTA-  44

seq1  CTTGTAATTCTTGAGCTCCATGAAGTTCTGGGCCATGGAATAATCTTGCA  100
        ||||  || |||||| |||||   |||||||||| |||| ||| ||||
seq2  -CTGTA--TC-TGAGCT-CATGA--GTCTGGGCCAT-GAAT-ATC-TGCA  84

seq1  AGTTTGTGAGAACTGCTCTGATAGCACACATTACCCTCAGGTGTTCTTCC  150
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGTTTGTGAGAACTGCTCTGATAGCACACATTACCCTCAGGTGTTC-TCC  133

seq1  TCTCTATACCCCCATGTGTGCATACATGAAAATGTACACAGGTACACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATACCCCCATGTGTGCATACATGAAAATGTACACAGGTACACATG  183

seq1  GAGGTCAGCTGAGGTTCATAGATTCCCTCAAACTGGAGTACAGGAAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAGCTGAGGTTCATAGATTCCCTCAAACTGGAGTACAGGAAGTTT  233

seq1  TGAACTGCCCAGTGTAGATGCTTGGAATCAACCTAGGGTCCTCTGCAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGCCCAGTGTAGATGCTTGGAATCAACCTAGGGTCCTCTGCAAGA  283

seq1  GCAGCATGCATTCTTAACTGTTGAGCTCGCTTGCTTGCTCCCTCACTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATGCATTCTTAACTGTTGAGCTCGCTTGCTTGCTCCCTCACTCCC  333

seq1  TTACATCTTTCTAATTCCCTTGTGATGCATTATGGATCCCCTCCAGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCTTTCTAATTCCCTTGTGATGCATTATGGATCCCCTCCAGTTTT  383

seq1  CCCCATCAATTACTAATAATGGATTCAGGTGAAAGTTGTAGCAATGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCAATTACTAATAATGGATTCAGGTGAAAGTTGTAGCAATGAACT  433

seq1  GGATATTATAAAACATGTCAGTATTCCAGTTATTTCTCTCTCCTTCACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTATAAAACATGTCAGTATTCCAGTTATTTCTCTCTCCTTCACTC  483

seq1  TTTATCCTTCTCTCTTTCTTGCCAAACATAAGAATGGTCACATTTATATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCTTCTCTCTTTCTTGCCAAACATAAGAATGGTCACATTTATATC  533

seq1  ATTTCCACAGTTTATTAAATCATTATTATTAAAATAATCTTGCAAATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCACAGTTTATTAAATCATTATTATTAAAATAATCTTGCAAATAAG  583

seq1  ACATTGGCATTTGGTACTGCAAAAAGAATAGGAACAATTCAATTAATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGCATTTGGTACTGCAAAAAGAATAGGAACAATTCAATTAATGAA  633

seq1  TGAGAGCAGAAATAATGTGAGCATAATTCCCCTCAATTTCCATAACCGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCAGAAATAATGTGAGCATAATTCCCCTCAATTTCCATAACCGTG  683

seq1  ATTTGCAATATGAGACTCCTGGGGATAATTTTAATGGGCTACAGTTTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAATATGAGACTCCTGGGGATAATTTTAATGGGCTACAGTTTAGA  733

seq1  ATTGTGAAGAACAGTATACACAAGACTAGAAAATCACTGCCTGACCCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAAGAACAGTATACACAAGACTAGAAAATCACTGCCTGACCCACA  783

seq1  GTGCCACAGAATTGAAACTGATAAAACATACATAGTTGCCATAAATAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACAGAATTGAAACTGATAAAACATACATAGTTGCCATAAATAATA  833

seq1  GTATTGTGACAAATTTTAAATGAAAATGGTCTCTTAAGGTAAAAGCTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTGACAAATTTTAAATGAAAATGGTCTCTTAAGGTAAAAGCTAAT  883

seq1  GCTAGAATTAAAGGGAAATAAACTGTAATGAATTGAGCTAAAATTTTTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAATTAAAGGGAAATAAACTGTAATGAATTGAGCTAAAATTTTTTT  933

seq1  AGAAATGAAAATTACTTTATTGAAAGAATCTGGCAGATAAAAACACCCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAAAATTACTTTATTGAAAGAATCTGGCAGATAAAAACACCCTA  983

seq1  CAGCTACACTGAAGCAAACAAGCCCAGCCCTGGTCCAACTCAATGCATCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTACACTGAAGCAAACAAGCCCAGCCCTGGTCCAACTCAATGCATCC  1033

seq1  TAATGAACTTCTATATAGTTGGACTATGTTTGGAAATCAACATTTCATAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAACTTCTATATAGTTGGACTATGTTTGGAAATCAACATTTCATAC  1083

seq1  ACAAGGCATATATGGATCTTGAAGAAGACATGAGAAGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCATATATGGATCTTGAAGAAGACATGAGAAGAATTC  1125