BAC Information

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BAC

Clone NameB6Ng01-270O17
Chromosome8 (Build37)
Map Location 65,466,610 - 65,467,705
singlet/doubletsinglet
Overlap geneSpock3
Upstream geneBC013672, Anxa10, LOC100040775, LOC384830, LOC100040804, LOC665267
Downstream geneLOC384831, EG244495
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270O17.bB6Ng01-270O17.g
ACCGA073137GA073138
length1,2201,094
definitionB6Ng01-270O17.b B6Ng01-270O17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaggaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcaaaggccagcttgctgcttggcctcttggcagtcgg
cttcaaggtcatagtgcacctccaccctatgctgagcccccgccctgcgt
agtgcatcagccctgcgcagagaggcaatggacagagaggcaatgcacag
actcgttcattccaaaggaggaacaaaggaaaatacaacaggcatttccg
gtctttgaaggagccgagggtgggcgtgtccacgctccggtagcgtatat
acagattaaagagcttgccgagtcggtccgtaactatggagtcagtgcta
atttcactatagcacaagtggaaaggcttgcgaatcacgctatgactcct
ggtgattggcaaacggttgtaaaagccgctctccctagtatgggcaaata
tatggaatggaaagcgctttggcacgaagctgcacaagcgcaggcccgag
caaacgcagctgctttgactccagagcagagagattggacttttgacttg
ttaacgggtcagggagcttattctgctgatcaaacaaactaccattgggg
agcttatgcccagatttcttccacggctattagggcctggaaggcgctct
ctcgagcaggtgaaaccactgggcagttaacaaagataatccagggacct
caggagtccttctcagattttgtggccagaatgacagaggcagcagggcg
tatttttggagattcagagcaagctgcgcctctgatagaacagctaatct
atgagcaagccacaaaggagtgccgagcagccatagccccaagaaagaac
aaaggtttacaagactggctcaggtttgtcgggagcttgggggacctctc
accaatgcagcttagcggctgccatccttcatcccaaaatgctccatggg
cagaaatgatcgagacattttttaactgcagagcctgggcatctagagat
tgcagagctccagtaaacaggaggactcctcacctcttttgcctctaagt
gtggcaagggttatcatagagagctgaacaatggtcgctctgtgagggat
ataagggcgcaatctccccactgaatgtcatctcactgatgtcaaacggt
catcaggcccctccgattca
gaattcaatcaaactaatacaattttctagtcttttgagactggtttcat
aaggttaggacatttccttttgtggtttccataattgcaatgtagaaaat
taaaaccacaacaagtactgttactgtgactcagtcatctttgggggcaa
tgattctactgttcctcactcaaccacgaagtcatggatcccataatagg
aactaagatggttctgcctaagcactgggtaaaatagtctgaattggttt
gttggtctgaccttggaccaaaaaatgtcagtatctggtccatactttgg
tccagcaatgacatacctggtactaatgcttagatactcatagttccttc
tggtttcaagagttctccctttagctcaccaaatggatctttaggtaggc
agtattgacacaggattacagggttaagagataaacctgagttttgtggt
catgagtttgttttttgttggtgggagagagtataattgttatcaataca
gtgatagcagagtaaagctagattacaagcagcttagggatccagtcatc
caaatgagttttggtcacttgagatttgcataaataggggcatataaaga
tcaaagctcatgggctaaaattaaaatataaatgtcacttcaagtgccat
ttgttctgaagatggcagcactgccttatgggatgggtggatgaatatat
cttctagattaaggtcactccttacccacagataagaaggattagaaaaa
gaattccataaccaccttaagtctaaagtctgacacagtgtatatatgag
ccactgggagcaaaatatttgctcattttttatatggatacttaaattgg
tagggctagtccccagacctcaaatgagagggaaggcaagggtcagttta
tccaccagtttatcatctgatacaggattcaacttagagacacttcacca
agggcacaaatacatgtgccattcagtgagttccttgcatgtatcaggac
catactacaccacaatttccaaaagaaaatgcttgtgtaaaggcctttta
cagcatgatggtgtatgggactggttatctaagtcaatttctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_65466610_65467705
seq2: B6Ng01-270O17.g_64_1157 (reverse)

seq1  ATAGAAAATGTGCTTTAGATAACAGGTCCCATACA-CATCAATGCTGT-A  48
      |||||||   ||  |||||||||  |||||||||| |||| ||||||| |
seq2  ATAGAAA--TTGACTTAGATAACCAGTCCCATACACCATC-ATGCTGTAA  47

seq1  AAGGCCTTTACACAAGCATTTTCTTTTTGAAATTGTGGTGTAGTAATGGT  98
      ||||||||||||||||||||||||||| |||||||||||||||| |||||
seq2  AAGGCCTTTACACAAGCATTTTCTTTTGGAAATTGTGGTGTAGT-ATGGT  96

seq1  CCTGATACATGC-AGGAACTCACTGAATGGCACATGTATTTGTGCCCTTG  147
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCTGATACATGCAAGGAACTCACTGAATGGCACATGTATTTGTGCCCTTG  146

seq1  GTGGAAGTGTCTCTAAGTTGAATCCTGTATCAGATGATAAACTGGTGGAT  197
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GT-GAAGTGTCTCTAAGTTGAATCCTGTATCAGATGATAAACTGGTGGAT  195

seq1  AAACTGACCCTTGCCTTCCCTCTCATTTGAGGTCTGGGGACTAGCCCTAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGACCCTTGCCTTCCCTCTCATTTGAGGTCTGGGGACTAGCCCTAC  245

seq1  CAATTTAAGTATCCATATAAAAAATGAGCAAATATTTTGCTCCCAGTGGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAAGTATCCATATAAAAAATGAGCAAATATTTTGCTCCCAGTGGC  295

seq1  TCATATATACACTGTGTCAGACTTTAGACTTAAGGTGGTTATGGAATTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATATACACTGTGTCAGACTTTAGACTTAAGGTGGTTATGGAATTCT  345

seq1  TTTTCTAATCCTTCTTATCTGTGGGTAAGGAGTGACCTTAATCTAGAAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAATCCTTCTTATCTGTGGGTAAGGAGTGACCTTAATCTAGAAGA  395

seq1  TATATTCATCCACCCATCCCATAAGGCAGTGCTGCCATCTTCAGAACAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCATCCACCCATCCCATAAGGCAGTGCTGCCATCTTCAGAACAAA  445

seq1  TGGCACTTGAAGTGACATTTATATTTTAATTTTAGCCCATGAGCTTTGAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTTGAAGTGACATTTATATTTTAATTTTAGCCCATGAGCTTTGAT  495

seq1  CTTTATATGCCCCTATTTATGCAAATCTCAAGTGACCAAAACTCATTTGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATGCCCCTATTTATGCAAATCTCAAGTGACCAAAACTCATTTGG  545

seq1  ATGACTGGATCCCTAAGCTGCTTGTAATCTAGCTTTACTCTGCTATCACT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGGATCCCTAAGCTGCTTGTAATCTAGCTTTACTCTGCTATCACT  595

seq1  GTATTGATAACAATTATACTCTCTCCCACCAACAAAAAACAAACTCATGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGATAACAATTATACTCTCTCCCACCAACAAAAAACAAACTCATGA  645

seq1  CCACAAAACTCAGGTTTATCTCTTAACCCTGTAATCCTGTGTCAATACTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAACTCAGGTTTATCTCTTAACCCTGTAATCCTGTGTCAATACTG  695

seq1  CCTACCTAAAGATCCATTTGGTGAGCTAAAGGGAGAACTCTTGAAACCAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTAAAGATCCATTTGGTGAGCTAAAGGGAGAACTCTTGAAACCAG  745

seq1  AAGGAACTATGAGTATCTAAGCATTAGTACCAGGTATGTCATTGCTGGAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACTATGAGTATCTAAGCATTAGTACCAGGTATGTCATTGCTGGAC  795

seq1  CAAAGTATGGACCAGATACTGACATTTTTTGGTCCAAGGTCAGACCAACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTATGGACCAGATACTGACATTTTTTGGTCCAAGGTCAGACCAACA  845

seq1  AACCAATTCAGACTATTTTACCCAGTGCTTAGGCAGAACCATCTTAGTTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATTCAGACTATTTTACCCAGTGCTTAGGCAGAACCATCTTAGTTC  895

seq1  CTATTATGGGATCCATGACTTCGTGGTTGAGTGAGGAACAGTAGAATCAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATGGGATCCATGACTTCGTGGTTGAGTGAGGAACAGTAGAATCAT  945

seq1  TGCCCCCAAAGATGACTGAGTCACAGTAACAGTACTTGTTGTGGTTTTAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCAAAGATGACTGAGTCACAGTAACAGTACTTGTTGTGGTTTTAA  995

seq1  TTTTCTACATTGCAATTATGGAAACCACAAAAGGAAATGTCCTAACCTTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACATTGCAATTATGGAAACCACAAAAGGAAATGTCCTAACCTTA  1045

seq1  TGAAACCAGTCTCAAAAGACTAGAAAATTGTATTAGTTTGATTGAATTC  1096
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCAGTCTCAAAAGACTAGAAAATTGTATTAGTTTGATTGAATTC  1094