BAC Information

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BAC

Clone NameB6Ng01-275C21
Chromosome8 (Build37)
Map Location 59,393,534 - 59,394,693
singlet/doubletsinglet
Overlap genenone
Upstream geneGlra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
Downstream geneLOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275C21.bB6Ng01-275C21.g
ACCGA076288GA076289
length1,1641,147
definitionB6Ng01-275C21.b B6Ng01-275C21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagatctgcatgggacagagcctttgacaggtacagtccccaa
agagcagaggtgaaaagcacattcatgtacttgaggtgaaggaccaccat
taaaaataaataaggaactccaaatgtgtaaatccgatctaagccaaacc
atatggcgtaaaatgaaaacatttcttcctgtacttttggcaatatggtt
tcttaccagattttatatacctggaagtatcaacacagctgttaccatgc
agtctctccccccgatagaaggtattgatgctataagtagtccggtgata
ttctcactgtgtagctatgtgtgcacaaagaatgtcatgcatgcagtaga
agtgttaaaatcctgggcaacacctcatacgttattggccttccatagtg
aacaaagtcatttttcaagcaagtcataaagtagtctaaaaaacaagtgt
ttcagtgtttgctccaaatgaggcagtggtgggggactgccgttcatctg
acatcatttctgatgtagtcagcaccagcttggtatctgattagggcccc
cgccatggtggtgccagacttacaactttaagtggggtggctgaaggaaa
ttaatgtgtcagagttccctgaaggtgagcgtgtctgcttcacgtttcct
tcagagagcttcaactggagttgcctttgattctttctaagagaatcttt
tgaagatatttctgcatctgggtaatagggagagatgagctatcaacagc
aaacacatctagcaaaaaacatgttgccacatcgtccctgaaagatgcag
atatctttggtgagaatgtggtaagatcagtggctccattcaaggctgct
gagaatccgcagagataacaaaccatcttgactatagcattaacctggct
catgtgacttgtattcacatcactttatattcctttaaatataggaaatg
tgtctggtggtggtggcagtggcagtgcacacctttaatcccaatgcttg
gaagatagagacaggcagagcttgaggttggggccagcctagtataacaa
agcaagtctcaggaaaggtggagggctacaccaatgggatccttgtcttg
gataaaaccaacaaactaacaacggaaaacaaaacagaaatcagggaaat
gctgcgctttcaca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcaggcaaatgcaaatcaaaacaaccctgagtt
tccatctcacaccagtcagaatggctaagaacaaaaattaggtgacagca
gatgctggcgaggatgtagagaaagaagaacactcccccactgttggtgg
tattgcaagcttgtacaaccactctggaaatcagtctggtggttcctcag
aaaactggatatagtactaccagaggatcctgcaataccactggtcatat
attcagaagatgttccaaccggtaagaaggacacatgctacactatgttc
aaagcagccttatttataatagccagaagctggaaagaacccagatgccc
ctcaagagaggaatggatacagaaaatgtggtacatttacacaatggagt
actactcagttattaaaaagaatgaatttataaaattcatagggaaatgg
atggacctggagggcatcatcctgagtgaggtaacccaatcacaaaggaa
ctcacacaatatgtactcactgataagtggatattagcccaaaaacttag
tatacccaagatatatgatacaaattgctaaacgcatgaaactctagaaa
aatgaagaccaatgtgtggacactgtgccccttcttagaatttggatcaa
aacacccatggaaggagttacagagacaaagtttggagctgtgtcaaaag
gatggaccatctagagcctgccatatccagggttccatcccataatctgc
ttccaaacgctgacaccattgcatatactaacaagattttgctgaaagga
cccaaatatagctgtcccttgtgagactatgccagggccctagcaaacac
agaagcagatgctcatagtcagcttttggaaggatcccagggccccaatg
gagagctagagaagtaccagagctaaagggatctgcacctatagtacata
catatgactacagtacccggagctctgactctagctcatatgtatcaaag
gatgctagtcgcatcactggcaaagaaagtcaatgacctgccaacctttt
attcagtcggtatgcaggtcaaacgtgaaatgtgtgtgtttatgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59393534_59394693
seq2: B6Ng01-275C21.b_46_1209 (reverse)

seq1  TGTG-AAGCGCAGCATCT-CCTGGTTTCTGTTTTGTTTTCTGTTTGTTTG  48
      |||| ||||||||||| | |||| |||||||||||||||| |||   || 
seq2  TGTGAAAGCGCAGCATTTCCCTGATTTCTGTTTTGTTTTCCGTT--GTTA  48

seq1  GTTTGTTTGGTTTTTATCAAGAC-AGGATCCCATT-GTGTAGCCCTC--A  94
      ||||| ||||||||   |||||| ||||||||||| |||||||||||   
seq2  GTTTG-TTGGTTTTATCCAAGACAAGGATCCCATTGGTGTAGCCCTCCAC  97

seq1  CTTTCCTGGGACTTGCTTTG-TATACTAGGCTGGCCCCAACCTCAAGCTC  143
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  CTTTCCTGAGACTTGCTTTGTTATACTAGGCTGGCCCCAACCTCAAGCTC  147

seq1  TGCCTGTCTCTATCTTCCAAGCATTGGGATTAAAGGTGTGCACTGCCACT  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTCTCTATCTTCCAAGCATTGGGATTAAAGGTGTGCACTGCCACT  197

seq1  GCCACCACCACCAGACACATTTCCTATATTTAAAGGAATATAAAGTGATG  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCACCACCAGACACATTTCCTATATTTAAAGGAATATAAAGTGATG  247

seq1  TGAATACAAGTCACATGAGCCAGGTTAATGCTATAGTCAAGATGGTTTGT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACAAGTCACATGAGCCAGGTTAATGCTATAGTCAAGATGGTTTGT  297

seq1  TATCTCTGCGGATTCTCAGCAGCCTTGAATGGAGCCACTGATCTTACCAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTGCGGATTCTCAGCAGCCTTGAATGGAGCCACTGATCTTACCAC  347

seq1  ATTCTCACCAAAGATATCTGCATCTTTCAGGGACGATGTGGCAACATGTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCACCAAAGATATCTGCATCTTTCAGGGACGATGTGGCAACATGTT  397

seq1  TTTTGCTAGATGTGTTTGCTGTTGATAGCTCATCTCTCCCTATTACCCAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTAGATGTGTTTGCTGTTGATAGCTCATCTCTCCCTATTACCCAG  447

seq1  ATGCAGAAATATCTTCAAAAGATTCTCTTAGAAAGAATCAAAGGCAACTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAAATATCTTCAAAAGATTCTCTTAGAAAGAATCAAAGGCAACTC  497

seq1  CAGTTGAAGCTCTCTGAAGGAAACGTGAAGCAGACACGCTCACCTTCAGG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGAAGCTCTCTGAAGGAAACGTGAAGCAGACACGCTCACCTTCAGG  547

seq1  GAACTCTGACACATTAATTTCCTTCAGCCACCCCACTTAAAGTTGTAAGT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTGACACATTAATTTCCTTCAGCCACCCCACTTAAAGTTGTAAGT  597

seq1  CTGGCACCACCATGGCGGGGGCCCTAATCAGATACCAAGCTGGTGCTGAC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACCACCATGGCGGGGGCCCTAATCAGATACCAAGCTGGTGCTGAC  647

seq1  TACATCAGAAATGATGTCAGATGAACGGCAGTCCCCCACCACTGCCTCAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCAGAAATGATGTCAGATGAACGGCAGTCCCCCACCACTGCCTCAT  697

seq1  TTGGAGCAAACACTGAAACACTTGTTTTTTAGACTACTTTATGACTTGCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCAAACACTGAAACACTTGTTTTTTAGACTACTTTATGACTTGCT  747

seq1  TGAAAAATGACTTTGTTCACTATGGAAGGCCAATAACGTATGAGGTGTTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATGACTTTGTTCACTATGGAAGGCCAATAACGTATGAGGTGTTG  797

seq1  CCCAGGATTTTAACACTTCTACTGCATGCATGACATTCTTTGTGCACACA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGATTTTAACACTTCTACTGCATGCATGACATTCTTTGTGCACACA  847

seq1  TAGCTACACAGTGAGAATATCACCGGACTACTTATAGCATCAATACCTTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACACAGTGAGAATATCACCGGACTACTTATAGCATCAATACCTTC  897

seq1  TATCGGGGGGAGAGACTGCATGGTAACAGCTGTGTTGATACTTCCAGGTA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGGGGGGAGAGACTGCATGGTAACAGCTGTGTTGATACTTCCAGGTA  947

seq1  TATAAAATCTGGTAAGAAACCATATTGCCAAAAGTACAGGAAGAAATGTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATCTGGTAAGAAACCATATTGCCAAAAGTACAGGAAGAAATGTT  997

seq1  TTCATTTTACGCCATATGGTTTGGCTTAGATCGGATTTACACATTTGGAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTACGCCATATGGTTTGGCTTAGATCGGATTTACACATTTGGAG  1047

seq1  TTCCTTATTTATTTTTAATGGTGGTCCTTCACCTCAAGTACATGAATGTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATTTATTTTTAATGGTGGTCCTTCACCTCAAGTACATGAATGTG  1097

seq1  CTTTTCACCTCTGCTCTTTGGGGACTGTACCTGTCAAAGGCTCTGTCCCA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCACCTCTGCTCTTTGGGGACTGTACCTGTCAAAGGCTCTGTCCCA  1147

seq1  TGCAGATCTGAGAATTC  1160
      |||||||||||||||||
seq2  TGCAGATCTGAGAATTC  1164