BAC Information

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BAC

Clone NameB6Ng01-277E13
Chromosome8 (Build37)
Map Location 77,836,666 - 77,837,736
singlet/doubletsinglet
Overlap genenone
Upstream geneIsx, Hmgb2l1, Tom1, LOC100039134, Hmox1, Mcm5, Rasd2, LOC675507
Downstream geneLOC384845, LOC666211, LOC100039229, 1700007B14Rik, LOC666036, LOC100039185, EG631594
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277E13.bB6Ng01-277E13.g
ACCGA077844GA077845
length1,0341,081
definitionB6Ng01-277E13.b B6Ng01-277E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggcattgcagaaattactgccac
tatcaaggacttgaaagatgcaggggtggtggttcccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcatttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttctttaggagtccagtggtgtggggcatgcagagatattccttctaagg
tgaaagataagttattgcacctggcccctcctacaaccaagaaagaagca
caacgtttagtgggtctatttggattctggagacaacacatccctcactt
gggtgtgttacttaggcctatttaccaattgactcggaaagctgctagct
ttgtgtggggcctggaacaggagaagcccttcaacaggtccaggcttgct
gtgcaggctgcttctaccacctggaaccatatgacctcagccaaacccga
tggtacttggaggggtcctgttggtcgtgataaa
gaattcacctctaatgttcccactaggaagggcacatcaaggcattgacc
aattgaggactgtaaaggcagaaggcagaaactccttaccaatcaggtcc
gccttacatcggatctataatcttgacaaaggagcaaaagggcagaatct
gctgcatggaaggcaagaagactagcagcatttgccataaatctgtatca
gatatgaagaacatttagcagcatagattgaaaaataaacactaaagagt
atctgtctaagcaccgggataatcacagacaaaggggcagggagcaatag
agaaggcaaaggctgacttagctaaaagttgaattcaattttagctctgt
ggtacgtaagtcacttataggtcccttttcattattccatgtaaaagtaa
tcaatgagtctgctgggctgacataaaggcagttgaggaatttttgtaaa
gtttaagaaagctgtgaagacattcccagaacaagtcttcaatctggata
aaacctgttctagaaacagatgtctaaaagattttcatctataagcccac
atcagtgttaccgggaaattggctatctttctttgtgaatttgttctcat
taatcaaagaatttagaaacaaagttggaagaaaactcaaggacaatttt
attggaatttgaggaaaaaataacaactggacgggtaagttgtatgtgtt
ggaagttgctaggagggaaatggagaagaggaaagaaaaggagtcacacc
tttacaacagcaagcaggttcagttgtggggcccagcaagcagccctgtg
gcagacaagctgtgagtgcgcttcagagaaaaagagaaagcagaatgcat
gcccaagctttggccaaactctcaaagaaattaacagaaaaaaaggagga
aaagctatgattttttttttctgagtaactcaggagagtgagcagaccac
catgctatatggtggaagctctgagagtactgcactggagggaggggatt
ctgagaaagatactattccacttccaaagaatattcaggcctgccctctt
cctttaggcatgggtgtcctcagatttaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_77836666_77837736
seq2: B6Ng01-277E13.g_66_1146 (reverse)

seq1  CCCTAAATCTGAG---ACACATG-CTAA--GGAGAGGGCAGGGCTGATTA  44
      |||||||||||||   || |||| ||||  | |||||||||| |||| ||
seq2  CCCTAAATCTGAGGACACCCATGCCTAAAGGAAGAGGGCAGGCCTGAATA  50

seq1  -TCTTTGG-AGTGGAATAGTATCTTTCTCAGAATCCCCTCCCT-CAGTGC  91
       ||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  TTCTTTGGAAGTGGAATAGTATCTTTCTCAGAATCCCCTCCCTCCAGTGC  100

seq1  AGTTACTCTCAGAGCTTCCACCATATAGCATGGTGGTCTGCTCACTCTCC  141
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-TACTCTCAGAGCTTCCACCATATAGCATGGTGGTCTGCTCACTCTCC  149

seq1  TGAGTTACTCAG--AAAAAAAATCATAGCTTTTCCTCCTTTTTTTCTGTT  189
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  TGAGTTACTCAGAAAAAAAAAATCATAGCTTTTCCTCCTTTTTTTCTGTT  199

seq1  AATTTCTTTGAGAGTTTGGCCAAAGCTTGGGCATGCATTCTGCTTTCTCT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTTGAGAGTTTGGCCAAAGCTTGGGCATGCATTCTGCTTTCTCT  249

seq1  TTTTCTCTGAAGCGCACTCACAGCTTGTCTGCCACAGGGCTGCTTGCTGG  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTGAAGCGCACTCACAGCTTGTCTGCCACAGGGCTGCTTGCTGG  299

seq1  GCCCCACAACTGAACCTGCTTGCTGTTGTAAAGGTGTGACTCCTTTTCTT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCACAACTGAACCTGCTTGCTGTTGTAAAGGTGTGACTCCTTTTCTT  349

seq1  TCCTCTTCTCCATTTCCCTCCTAGCAACTTCCAACACATACAACTTACCC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCTCCATTTCCCTCCTAGCAACTTCCAACACATACAACTTACCC  399

seq1  GTCCAGTTGTTATTTTTTCCTCAAATTCCAATAAAATTGTCCTTGAGTTT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTTGTTATTTTTTCCTCAAATTCCAATAAAATTGTCCTTGAGTTT  449

seq1  TCTTCCAACTTTGTTTCTAAATTCTTTGATTAATGAGAACAAATTCACAA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAACTTTGTTTCTAAATTCTTTGATTAATGAGAACAAATTCACAA  499

seq1  AGAAAGATAGCCAATTTCCCGGTAACACTGATGTGGGCTTATAGATGAAA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATAGCCAATTTCCCGGTAACACTGATGTGGGCTTATAGATGAAA  549

seq1  ATCTTTTAGACATCTGTTTCTAGAACAGGTTTTATCCAGATTGAAGACTT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTAGACATCTGTTTCTAGAACAGGTTTTATCCAGATTGAAGACTT  599

seq1  GTTCTGGGAATGTCTTCACAGCTTTCTTAAACTTTACAAAAATTCCTCAA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGGAATGTCTTCACAGCTTTCTTAAACTTTACAAAAATTCCTCAA  649

seq1  CTGCCTTTATGTCAGCCCAGCAGACTCATTGATTACTTTTACATGGAATA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTATGTCAGCCCAGCAGACTCATTGATTACTTTTACATGGAATA  699

seq1  ATGAAAAGGGACCTATAAGTGACTTACGTACCACAGAGCTAAAATTGAAT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGGGACCTATAAGTGACTTACGTACCACAGAGCTAAAATTGAAT  749

seq1  TCAACTTTTAGCTAAGTCAGCCTTTGCCTTCTCTATTGCTCCCTGCCCCT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTTTAGCTAAGTCAGCCTTTGCCTTCTCTATTGCTCCCTGCCCCT  799

seq1  TTGTCTGTGATTATCCCGGTGCTTAGACAGATACTCTTTAGTGTTTATTT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGTGATTATCCCGGTGCTTAGACAGATACTCTTTAGTGTTTATTT  849

seq1  TTCAATCTATGCTGCTAAATGTTCTTCATATCTGATACAGATTTATGGCA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCTATGCTGCTAAATGTTCTTCATATCTGATACAGATTTATGGCA  899

seq1  AATGCTGCTAGTCTTCTTGCCTTCCATGCAGCAGATTCTGCCCTTTTGCT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGCTAGTCTTCTTGCCTTCCATGCAGCAGATTCTGCCCTTTTGCT  949

seq1  CCTTTGTCAAGATTATAGATCCGATGTAAGGCGGACCTGATTGGTAAGGA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTCAAGATTATAGATCCGATGTAAGGCGGACCTGATTGGTAAGGA  999

seq1  GTTTCTGCCTTCTGCCTTTACAGTCCTCAATTGGTCAATGCCTTGATGTG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGCCTTCTGCCTTTACAGTCCTCAATTGGTCAATGCCTTGATGTG  1049

seq1  CCCTTCCTAGTGGGAACATTAGAGGTGAATTC  1071
      ||||||||||||||||||||||||||||||||
seq2  CCCTTCCTAGTGGGAACATTAGAGGTGAATTC  1081