BAC Information

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BAC

Clone NameB6Ng01-278N03
Chromosome8 (Build37)
Map Location 43,300,173 - 43,410,582
singlet/doubletdoublet
Overlap geneEG620772
Upstream geneFgl1, Pcm1, Asah1, Frg1, LOC100039376, Gm1815, LOC671994, Zfp353
Downstream geneLOC628212, Triml1, LOC622082, EG622117, LOC100039417, Zfp42
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278N03.bB6Ng01-278N03.g
ACCGA078962GA078963
length5461,195
definitionB6Ng01-278N03.b B6Ng01-278N03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,300,173 - 43,300,724)(43,409,388 - 43,410,582)
sequence
cagaaagaagccaaaagagcctggaaatttagttcaggaacaaaatagct
ttctttttttttctgtttattcaaccaaaatagttttcttagatgaaagt
agaatagaatggaggttagaagatccagagacgaccccacccggggatcc
atcccataatcagccaccaaacccagacactattacatatgccaacaaga
ttttgctgaaaggaccctgatgtagctgtctcttgtgaggctatgccagt
gcctggcaaacacagaagtggatgatcacagtcagctattggatggaaca
cagggcccccaatggaggagctagagaaagtacccaaaagctgaaggggt
ctgcaacgctataggtggaacaacattatgaactaaccagtacctctgga
gctcgtgtctctagctgcatttgtagcagtagatggcctagttggccatc
attgggaagagaggctccttggtcttgcaaactttatatgccccagtaca
ggagaatgccaaggccaagaagtgggagtgggtgggtaggggagca

gaattctttgtgggtgggcaggtcaatcgctgccatttaaatcctcacac
ctgtgcatcttcacagtttggcttggtgacaaatttaaaaacaaaagaaa
acaagctttccctccagaaaaacacagcccttgaaatgatgagcaacaaa
gccagaagagacacgtgctgtttgcacaggtctcatttttccatgttttg
aagagggatttgtgtttactgtgggcaggtgcatcgtgtcttcgaatact
gatgggttctcccgtgctttgtcattgaacttgagaaaaactgcaaaaaa
aagcttgcaaaactggggaaagcatttgggtaaaagtgctgcagattgca
accacctgctctcagtctggccctatgaatgcaggaagagcactgccagt
tctgggaaagcagccctacagcactcttgctctcacggaatatcaatggc
tcaaagtgtccttaaacctctctgaattttactgtcagtatctctcccta
gcaaaagaatagagttgcaatttattcttagaggctgagatgggggcaca
tcagtggaaacacagacaataaggaaacttttaggttataaatgacttaa
ttaaccaatatacacagaaaaacaaacaaacaaacaaacaaaaaacaagg
atccagggtggcacatacctctagttttacttattgtggagtcttaggtc
agaaaagacctcagtcagccaccttgagattagtctggttaacaagctga
gtccccatctgaaaaacaattaaaataaaaatattcaaaagattaaccaa
gaatataaattgacagctatctcccaggtgcattatagagtatttgattt
attattactggtctgaaaactctatggagataggattttccccccattgt
ctaatatgcaaaacctattctgctacaggaaatatggtgtagattaagca
aggtcacaagctttgagcttatgtgattattcagaaatatttttcttctc
tgttcatttcatgatatcttaccagctttgtcctcagtaacctggaagat
gaaaacagctcttatacatgtgccgatagtttcccagacaacacattatg
gatgcccaatgtactttatttttctcaatttatgaaatagtctaagtgcc
aaagatttatcaacggtcaattagcttgccagacacgcgtgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_43300173_43300724
seq2: B6Ng01-278N03.b_46_597

seq1  GAATTCCAGAAAGAAGCCAAAAGAGCCTGGAAATTTAGTTCAGGAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAAGAAGCCAAAAGAGCCTGGAAATTTAGTTCAGGAACAAA  50

seq1  ATAGCTTTCTTTTTTTTTCTGTTTATTCAACCAAAATAGTTTTCTTAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTTCTTTTTTTTTCTGTTTATTCAACCAAAATAGTTTTCTTAGAT  100

seq1  GAAAGTAGAATAGAATGGAGGTTAGAAGATCCAGAGACGACCCCACCCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTAGAATAGAATGGAGGTTAGAAGATCCAGAGACGACCCCACCCGG  150

seq1  GGATCCATCCCATAATCAGCCACCAAACCCAGACACTATTACATATGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCATCCCATAATCAGCCACCAAACCCAGACACTATTACATATGCCA  200

seq1  ACAAGATTTTGCTGAAAGGACCCTGATGTAGCTGTCTCTTGTGAGGCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATTTTGCTGAAAGGACCCTGATGTAGCTGTCTCTTGTGAGGCTAT  250

seq1  GCCAGTGCCTGGCAAACACAGAAGTGGATGATCACAGTCAGCTATTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGCCTGGCAAACACAGAAGTGGATGATCACAGTCAGCTATTGGAT  300

seq1  GGAACACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAAAGCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAAAGCTGA  350

seq1  AGGGGTCTGCAACGCTATAGGTGGAACAACATTATGAACTAACCAGTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTCTGCAACGCTATAGGTGGAACAACATTATGAACTAACCAGTACC  400

seq1  TCTGGAGCTCGTGTCTCTAGCTGCATTTGTAGCAGTAGATGGCCTAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGCTCGTGTCTCTAGCTGCATTTGTAGCAGTAGATGGCCTAGTTG  450

seq1  GCCATCATTGGGAAGAGAGGCTCCTTGGTCTTGCAAACTTTATATGCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCATTGGGAAGAGAGGCTCCTTGGTCTTGCAAACTTTATATGCCCC  500

seq1  AGTACAGGAGAATGCCAAGGCCAAGAAGTGGGAGTGGGTGGGTAGGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGGAGAATGCCAAGGCCAAGAAGTGGGAGTGGGTGGGTAGGGGAG  550

seq1  CA  552
      ||
seq2  CA  552


seq1: chr8_43409388_43410582
seq2: B6Ng01-278N03.g_65_1259 (reverse)

seq1  AAAACA--CGTCTCTG--CAGCTAAATGACCGTTGATAAATCTTT-GCAC  45
      ||||||  ||| ||||   |||||| ||||||||||||||||||| ||||
seq2  AAAACACGCGTGTCTGGCAAGCTAATTGACCGTTGATAAATCTTTGGCAC  50

seq1  TTAGACTTATTCATAAAATGAGAAAATAAAAGTACA-TGGGCATCCATTA  94
      |||||||  |||||||| ||||||||  |||||||| |||||||||| ||
seq2  TTAGACTATTTCATAAATTGAGAAAAATAAAGTACATTGGGCATCCA-TA  99

seq1  ATGTGTTGTCTGGGAAACTATCGGGCACATGTTATAAGAGCTTGTTTTCA  144
      |||||||||||||||||||||| |||||||| ||||||||| ||||||||
seq2  ATGTGTTGTCTGGGAAACTATC-GGCACATG-TATAAGAGC-TGTTTTCA  146

seq1  TTCTTCCAGGTTACTGAGGACAAAGCTGGTAAGATTATCATTGAAATGAA  194
       ||||||||||||||||||||||||||||||||| ||||| |||||||||
seq2  -TCTTCCAGGTTACTGAGGACAAAGCTGGTAAGA-TATCA-TGAAATGAA  193

seq1  CAGAGAAG-AAAATATTTCTGAATAATCACATAAGCTCAAAGCTTGTGAC  243
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAGAAAAATATTTCTGAATAATCACATAAGCTCAAAGCTTGTGAC  243

seq1  CTTGCTTAATCTACACCATATTTCCTGTAGCAGAATAGGTTTTGCATATT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTAATCTACACCATATTTCCTGTAGCAGAATAGGTTTTGCATATT  293

seq1  AGACAATGGGGGGAAAATCCTATCTCCATAGAGTTTTCAGACCAGTAATA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATGGGGGGAAAATCCTATCTCCATAGAGTTTTCAGACCAGTAATA  343

seq1  ATAAATCAAATACTCTATAATGCACCTGGGAGATAGCTGTCAATTTATAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCAAATACTCTATAATGCACCTGGGAGATAGCTGTCAATTTATAT  393

seq1  TCTTGGTTAATCTTTTGAATATTTTTATTTTAATTGTTTTTCAGATGGGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTTAATCTTTTGAATATTTTTATTTTAATTGTTTTTCAGATGGGG  443

seq1  ACTCAGCTTGTTAACCAGACTAATCTCAAGGTGGCTGACTGAGGTCTTTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCTTGTTAACCAGACTAATCTCAAGGTGGCTGACTGAGGTCTTTT  493

seq1  CTGACCTAAGACTCCACAATAAGTAAAACTAGAGGTATGTGCCACCCTGG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTAAGACTCCACAATAAGTAAAACTAGAGGTATGTGCCACCCTGG  543

seq1  ATCCTTGTTTTTTGTTTGTTTGTTTGTTTGTTTTTCTGTGTATATTGGTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGTTTTTTGTTTGTTTGTTTGTTTGTTTTTCTGTGTATATTGGTT  593

seq1  AATTAAGTCATTTATAACCTAAAAGTTTCCTTATTGTCTGTGTTTCCACT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGTCATTTATAACCTAAAAGTTTCCTTATTGTCTGTGTTTCCACT  643

seq1  GATGTGCCCCCATCTCAGCCTCTAAGAATAAATTGCAACTCTATTCTTTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCCCCCATCTCAGCCTCTAAGAATAAATTGCAACTCTATTCTTTT  693

seq1  GCTAGGGAGAGATACTGACAGTAAAATTCAGAGAGGTTTAAGGACACTTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGGAGAGATACTGACAGTAAAATTCAGAGAGGTTTAAGGACACTTT  743

seq1  GAGCCATTGATATTCCGTGAGAGCAAGAGTGCTGTAGGGCTGCTTTCCCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATTGATATTCCGTGAGAGCAAGAGTGCTGTAGGGCTGCTTTCCCA  793

seq1  GAACTGGCAGTGCTCTTCCTGCATTCATAGGGCCAGACTGAGAGCAGGTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGCAGTGCTCTTCCTGCATTCATAGGGCCAGACTGAGAGCAGGTG  843

seq1  GTTGCAATCTGCAGCACTTTTACCCAAATGCTTTCCCCAGTTTTGCAAGC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAATCTGCAGCACTTTTACCCAAATGCTTTCCCCAGTTTTGCAAGC  893

seq1  TTTTTTTTGCAGTTTTTCTCAAGTTCAATGACAAAGCACGGGAGAACCCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGCAGTTTTTCTCAAGTTCAATGACAAAGCACGGGAGAACCCA  943

seq1  TCAGTATTCGAAGACACGATGCACCTGCCCACAGTAAACACAAATCCCTC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATTCGAAGACACGATGCACCTGCCCACAGTAAACACAAATCCCTC  993

seq1  TTCAAAACATGGAAAAATGAGACCTGTGCAAACAGCACGTGTCTCTTCTG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAACATGGAAAAATGAGACCTGTGCAAACAGCACGTGTCTCTTCTG  1043

seq1  GCTTTGTTGCTCATCATTTCAAGGGCTGTGTTTTTCTGGAGGGAAAGCTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTTGCTCATCATTTCAAGGGCTGTGTTTTTCTGGAGGGAAAGCTT  1093

seq1  GTTTTCTTTTGTTTTTAAATTTGTCACCAAGCCAAACTGTGAAGATGCAC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTTTGTTTTTAAATTTGTCACCAAGCCAAACTGTGAAGATGCAC  1143

seq1  AGGTGTGAGGATTTAAATGGCAGCGATTGACCTGCCCACCCACAAAGAAT  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGAGGATTTAAATGGCAGCGATTGACCTGCCCACCCACAAAGAAT  1193

seq1  TC  1195
      ||
seq2  TC  1195


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