BAC Information

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BAC

Clone NameB6Ng01-279C19
Chromosome8 (Build37)
Map Location 89,364,873 - 89,365,918
singlet/doubletsinglet
Overlap geneBC004022
Upstream genePhkb, LOC671665, LOC100040165, Abcc12, Lonp2, Siah1a, ENSMUSG00000074178
Downstream geneLOC666960, EG625298, EG330819, Cbln1, LOC100040294, 4933402J07Rik, Zfp423
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279C19.bB6Ng01-279C19.g
ACCGA079223GA079224
length1,1871,050
definitionB6Ng01-279C19.b B6Ng01-279C19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctctccaagacatgaaggtgtgttggattttatcaaagg
ccttttcaacatctaatgagatgatcatatgatctttttcctttgagttt
gtttatatagtaaattacattgatggattttcatatattgaaccatcatg
gaaatgcaaatcaaaatgaccctgggattctacctcacaccaatcagact
gactaagataaaaaactcaagtgacagcacatgctggcaaggatgtagag
gaaaggaaatattcctcccttgctgatgggattgaaaattcgtataacta
ctctggaaatcaatctggaagtttctcagaaattttgaaatagttctacc
agaagacccaactgtatcactcctgagcatatacccaaaaggtgtgccat
catatcacacaaacatgtgctccactatgttcatagcagccttattcata
atagccagaaactggaagtaacacaactatccctcaaccaaagaatggat
acagaaatgtaattcatttacacagctattaaaaacaatgacgtcatgaa
ttttgcaggcaaatagatgaagctagaaaatatcatcctgaatgatgtaa
cctagatccaaaaggaatacataagtggatattagctaaaaagtacagaa
tacgcatgatataccctacagacccaaagaagttaaacaagaaggaagac
ccaagtgagggtgcttcaatctcacctagaagggggaataaaataatcat
gggagaaagacgaagggaagaacccaggtggtagaagagagggcaggatc
agacaggggcaggatcagacatgggggagacaggagagaagcacagaggg
ccaggagaagaaatggaaatatacaactcctgaggataggacatgggggg
aacctctagaaagacccagagacctgagatgggggaggctcccaggactc
aatagagatcaccttagccaaaatgcccacagtgggcatacctcagtagc
tagacagataccccagtggagggatgagacctcacctactttcaaagttt
caccaatgttccatgtctaaaaaaaaggtcatggacagattgagcaagat
ggaatgatgcggacagtgatctgggatcacttgtatcaatcgtcgggtaa
gcattccaacccgtgaacactattatatgagcagacg
gaattcctcccacccccacctccaaagggggacagatcgagccaggcaat
tggacccacccccaaattgaacaaaggtgggtcccgtctctgaacacgat
caccatagatcctccagggacctcttgccaaagccgcagtcaagaaagca
ccaccctccagctctcacttgaacagacatttattgagcacctaccaagt
gcaaggcacttttaggtgccacaagagatacagagtgaccatatggtccc
tgcccacgaggagctcacagtctagagggaggcaacacagtacacagttg
gctgcagctacaccggccagagtggtaagagccagaagcaagacaccaaa
ttgccatggggccacagaatagcatagagctgcttctgctctgaacacaa
agagaactcagggctgggcctttgaggaggcaggctgtagggaagaaggg
catgtctatgagaggaagaaacatgaacagggcctatggggaacctagat
ctgggtggctggagtaaggatcatggcaagagaaagcagacagtcaagtg
cggccatggggcagcagccgcggacacatggctcagagggtaggaacgtg
atgctctggtcgaagatcacagaggaagaggatgatgcaaaatggccctc
tagatgaacttggagtcccctggaattagggagagggaagagctgtaagg
tagccaatgagggagggaacggtgtcacggaggattgtgggaacaggtgg
taggcagtagcaagccaagggccaagaaggatttaagggacctcagagtt
aggtgagagatggcaagatgcatgctgaggttctgggagccaagatccca
caggttagtgagaggactggtgtcacagagtggagggtagtcaggagagt
ggcgactccataaggaagtccagttccagaccacctaccagggccctgca
ctcaagggcgtgtagcagtgacaagccaccagcatttgcctctaaagcac
tgagtgcatgcactcaggtcagtgaacagattgacagcctgcctttagca

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_89364873_89365918
seq2: B6Ng01-279C19.g_63_1112

seq1  GAATTCCTCCCACCCCCACCTCCAAAGGGGGACAGATCGAGCCAGGCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCACCCCCACCTCCAAAGGGGGACAGATCGAGCCAGGCAAT  50

seq1  TGGACCCACCCCCAAATTGAACAAAGGTGGGTCCCGTCTCTGAACACGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCCACCCCCAAATTGAACAAAGGTGGGTCCCGTCTCTGAACACGAT  100

seq1  CACCATAGATCCTCCAGGGACCTCTTGCCAAAGCCGCAGTCAAGAAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATAGATCCTCCAGGGACCTCTTGCCAAAGCCGCAGTCAAGAAAGCA  150

seq1  CCACCCTCCAGCTCTCACTTGAACAGACATTTATTGAGCACCTACCAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTCCAGCTCTCACTTGAACAGACATTTATTGAGCACCTACCAAGT  200

seq1  GCAAGGCACTTTTAGGTGCCACAAGAGATACAGAGTGACCATATGGTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCACTTTTAGGTGCCACAAGAGATACAGAGTGACCATATGGTCCC  250

seq1  TGCCCACGAGGAGCTCACAGTCTAGAGGGAGGCAACACAGTACACAGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACGAGGAGCTCACAGTCTAGAGGGAGGCAACACAGTACACAGTTG  300

seq1  GCTGCAGCTACACCGGCCAGAGTGGTAAGAGCCAGAAGCAAGACACCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGCTACACCGGCCAGAGTGGTAAGAGCCAGAAGCAAGACACCAAA  350

seq1  TTGCCATGGGGCCACAGAATAGCATAGAGCTGCTTCTGCTCTGAACACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATGGGGCCACAGAATAGCATAGAGCTGCTTCTGCTCTGAACACAA  400

seq1  AGAGAACTCAGGGCTGGGCCTTTGAGGAGGCAGGCTGTAGGGAAGAAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACTCAGGGCTGGGCCTTTGAGGAGGCAGGCTGTAGGGAAGAAGGG  450

seq1  CATGTCTATGAGAGGAAGAAACATGAACAGGGCCTATGGGGAACCTAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTATGAGAGGAAGAAACATGAACAGGGCCTATGGGGAACCTAGAT  500

seq1  CTGGGTGGCTGGAGTAAGGATCATGGCAAGAGAAAGCAGACAGTCAAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGGCTGGAGTAAGGATCATGGCAAGAGAAAGCAGACAGTCAAGTG  550

seq1  CGGCCATGGGGCAGCAGCCGCGGACACATGGCTCAGAGGGTAGGAACGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCATGGGGCAGCAGCCGCGGACACATGGCTCAGAGGGTAGGAACGTG  600

seq1  ATGCTCTGGTCGAAGATCACAGAGGAAGAGGATGATGCAAAATGGCCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTGGTCGAAGATCACAGAGGAAGAGGATGATGCAAAATGGCCCTC  650

seq1  TAGATGAACTTGGAGTCCCCTGGAATTAGGGAGAGGGAAGAGCTGTAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAACTTGGAGTCCCCTGGAATTAGGGAGAGGGAAGAGCTGTAAGG  700

seq1  TAGCCAATGAGGGAGGGAACGGTGTCACGGAGGATTGTGGGAACAGGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAATGAGGGAGGGAACGGTGTCACGGAGGATTGTGGGAACAGGTGG  750

seq1  TAGGCAGTAGCAAGCCAAGGGCCAAGAAGGATTTAAGGGACCTCAGAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGTAGCAAGCCAAGGGCCAAGAAGGATTTAAGGGACCTCAGAGTT  800

seq1  AGGTGAGAGATGGCAGGATGCAGGCTGAGGTTCTGGGAGCCAAGATCCCA  850
      ||||||||||||||| |||||| |||||||||||||||||||||||||||
seq2  AGGTGAGAGATGGCAAGATGCATGCTGAGGTTCTGGGAGCCAAGATCCCA  850

seq1  CAGGGTTAGTGAGAGGACTGGTGTCACAGAGTGGAGGGTAGTCAGGAGAG  900
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-GGTTAGTGAGAGGACTGGTGTCACAGAGTGGAGGGTAGTCAGGAGAG  899

seq1  TGGCGACTCC-TAAGGAAGTCCAGTTCCAGACCACCTACCAGGGCCCTGC  949
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGGCGACTCCATAAGGAAGTCCAGTTCCAGACCACCTACCAGGGCCCTGC  949

seq1  ACTCAA-GGCGTGTGGCAGTGACAAGCCACCAGC--TTTCCTCTAAAGCA  996
      |||||| ||||||| |||||||||||||||||||  || |||||||||||
seq2  ACTCAAGGGCGTGTAGCAGTGACAAGCCACCAGCATTTGCCTCTAAAGCA  999

seq1  CTGAGTCCAT-CCCTCAGGGCGGTG-ACAGATTGACAGCCTGCCTTTTAG  1044
      |||||| ||| | |||||| | ||| |||||||||||||||||| |||||
seq2  CTGAGTGCATGCACTCAGGTCAGTGAACAGATTGACAGCCTGCC-TTTAG  1048

seq1  CA  1046
      ||
seq2  CA  1050