BAC Information

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BAC

Clone NameB6Ng01-283I06
Chromosome8 (Build37)
Map Location 59,207,158 - 59,208,238
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
Downstream geneLOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283I06.bB6Ng01-283I06.g
ACCGA082457GA082458
length1,0711,159
definitionB6Ng01-283I06.b B6Ng01-283I06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgcaagtatctgtctgttaacaaacatccagacacaatttt
caagccatttcacagcaatttgtttttgattggctattaattgcaaactg
gaatgttagagttcgactaagaataatggtgatttcttggcatcataaag
atttaaagtttttcacttcactaacttggatatgagaaagtatttcttaa
ttcttggcagtcaggcaaccacttccatggttccacttactggggttaca
atataagtttttgagttaagctgaaattttataactttggaatgtctaac
taagtgtctgtaaatgtggcacttctctgtaaattgaaatgaaagcgcaa
tctttttatacatagaaagttgggaaacagaaaattaatggtgcagtatt
tcatagtttccttaattccttcagatatgtcaacagaaataagaaaatta
aatagatcagtcctccataaggatcctaattctatgcatttctagtttct
atgtatgattaataattcagaggaagttttaatgacaacctcaatgctag
accatggtagaaagacgtgttatacgatttgcaagataatttggaaaggt
gttattctgttaaaaggaaaaactgacttttttgtttcatgagaaatcca
aatatcagtgtcaaagagcttggtgtttctcaataaatgagaaacaggat
tggttgttcggggctatttttaggtattcacttcagttctaatttcttca
tatgacagaaattaacagcagaataaactaaaccaccactaaatcagcat
atttggcacttgaagcatttatacaaaatggccttctcaaatgcaatgcc
cttgttctcttacattacctcaattagtcacctatttcccaacacacact
tgaagttgcagaatcaattttacttttagtttgcccactttgtctagaca
attttggaagttagatagtgtgggggatagaatgcaacatgggcagctgg
atcatgcatattaaatctgctgtctactctgctctgcatttctctcatca
actcaacagcactgccaatgt
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaagatgttggagaaagaggaacactcctccattgttggt
aggattgcaagcttgtacaaccactctggaaatctgtctggcagttcctc
agaaaactggacatagtactaccggaagatcccgcaatacctctcctggg
catatatccagaagatgttccaaccagtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagttggaaagaacccaga
tgacccccaacagaggaatggatacagaaaatgtggtacatttacataat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagtgaggtaacccaatcacaa
aggaactcacacaatatgtactcagtgataagtggatattagcccagaaa
cttaggatacccaagatataagatacaatttgctaaaagcatgaaactca
agaagaacgaagaccaaagtgtggacactttgtcccttcttagaattggg
aacaaaacacccatggaaggagttacagagacaaagtttggagctgtgac
gaaaggctggaccatctagagactgccatatccagggttccatcccataa
tcagcttccaaacgctgacaccattgcaaatactagcaagattttgctga
aaggacccagatatagctgtctcttgtgagactaggccggggcctagcaa
cacagaagtggatgctcacagtcagctattggatggatcacagggtcccc
aatggaggagctagagaatgtacccaagagctaaagggatctgcacctat
agtggacacattttgaactaccagtacctgagctcttgactctagctgca
tatgtatcaaagatggctagttcgcattcactggaagagaagtccaagtg
actgctactttatatggctcagtacaaggacgtcgaggacccaaaaaaga
tgggaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59207158_59208238
seq2: B6Ng01-283I06.b_43_1113

seq1  GAATTCTTTTGCAAGTATCTGTCTGTTAACAAACATCCAGACACAATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGCAAGTATCTGTCTGTTAACAAACATCCAGACACAATTTT  50

seq1  CAAGCCATTTCACAGCAATTTGTTTTTGATTGGCTATTAATTGCAAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCATTTCACAGCAATTTGTTTTTGATTGGCTATTAATTGCAAACTG  100

seq1  GAATGTTAGAGTTCGACTAAGAATAATGGTGATTTCTTGGCATCATAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTAGAGTTCGACTAAGAATAATGGTGATTTCTTGGCATCATAAAG  150

seq1  ATTTAAAGTTTTTCACTTCACTAACTTGGATATGAGAAAGTATTTCTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGTTTTTCACTTCACTAACTTGGATATGAGAAAGTATTTCTTAA  200

seq1  TTCTTGGCAGTCAGGCAACCACTTCCATGGTTCCACTTACTGGGGTTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGCAGTCAGGCAACCACTTCCATGGTTCCACTTACTGGGGTTACA  250

seq1  ATATAAGTTTTTGAGTTAAGCTGAAATTTTATAACTTTGGAATGTCTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGTTTTTGAGTTAAGCTGAAATTTTATAACTTTGGAATGTCTAAC  300

seq1  TAAGTGTCTGTAAATGTGGCACTTCTCTGTAAATTGAAATGAAAGCGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTCTGTAAATGTGGCACTTCTCTGTAAATTGAAATGAAAGCGCAA  350

seq1  TCTTTTTATACATAGAAAGTTGGGAAACAGAAAATTAATGGTGCAGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTATACATAGAAAGTTGGGAAACAGAAAATTAATGGTGCAGTATT  400

seq1  TCATAGTTTCCTTAATTCCTTCAGATATGTCAACAGAAATAAGAAAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTTTCCTTAATTCCTTCAGATATGTCAACAGAAATAAGAAAATTA  450

seq1  AATAGATCAGTCCTCCATAAGGATCCTAATTCTATGCATTTCTAGTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATCAGTCCTCCATAAGGATCCTAATTCTATGCATTTCTAGTTTCT  500

seq1  ATGTATGATTAATAATTCAGAGGAAGTTTTAATGACAACCTCAATGCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGATTAATAATTCAGAGGAAGTTTTAATGACAACCTCAATGCTAG  550

seq1  ACCATGGTAGAAAGACGTGTTATACGATTTGCAAGATAATTTGGAAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGTAGAAAGACGTGTTATACGATTTGCAAGATAATTTGGAAAGGT  600

seq1  GTTATTCTGTTAAAAGGAAAAACTGACTTTTTTGTTTCATGAGAAATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCTGTTAAAAGGAAAAACTGACTTTTTTGTTTCATGAGAAATCCA  650

seq1  AATATCAGTGTCAAAGAGCTTGGTGTTTCTCAATAAATGAGAAACAGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAGTGTCAAAGAGCTTGGTGTTTCTCAATAAATGAGAAACAGGAT  700

seq1  TGGTTGTTCGGGGCTATTTTTAGGTATTCACTTCAGTTCTAATTTCTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTTCGGGGCTATTTTTAGGTATTCACTTCAGTTCTAATTTCTTCA  750

seq1  TATGACAGAAATTAACAGCAGAATAAACTAAACCACCACTAAATCAGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACAGAAATTAACAGCAGAATAAACTAAACCACCACTAAATCAGCAT  800

seq1  ATTTGGCACTTGAAGCATTTATACAAAATGGCCTTCTCAAATGCAATGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCACTTGAAGCATTTATACAAAATGGCCTTCTCAAATGCAATGCC  850

seq1  CTTGTTCTCTTACATTACCTCAATTAGTCACCTATTTCCCAACACACACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCTCTTACATTACCTCAATTAGTCACCTATTTCCCAACACACACT  900

seq1  TGAAGTTGCAGAATCAATTTTACTTTTAGTTTGCCCACTTTGTCTAGACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTGCAGAATCAATTTTACTTTTAGTTTGCCCACTTTGTCTAGACA  950

seq1  ATTTTGGAAGTTTAGATAGTGT-GGGGATAGAATGCAACATGGGCAGCTG  999
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  ATTTTGGAAG-TTAGATAGTGTGGGGGATAGAATGCAACATGGGCAGCTG  999

seq1  GATCATGCATATTTAAATCCTGCTTGTCTACCTCTTGCCTCCTGCATTTC  1049
      ||||||||||| |||||| |||| |||||| ||| |||   |||||||||
seq2  GATCATGCATA-TTAAAT-CTGC-TGTCTA-CTC-TGC--TCTGCATTTC  1042

seq1  TTCTCATCCAACTCAAACAGCACTGCCCATGT  1081
       |||||| |||||| |||||||||||| ||||
seq2  -TCTCAT-CAACTC-AACAGCACTGCCAATGT  1071