BAC Information

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BAC

Clone NameB6Ng01-287F17
Chromosome8 (Build37)
Map Location 118,714,797 - 118,880,948
singlet/doubletdoublet
Overlap genenone
Upstream geneWwox, Maf
Downstream geneLOC384868, LOC668233, Dynlrb2, Cdyl2, LOC100043053, 2310061C15Rik, 2610510J17Rik, BC060631, 1700030J22Rik, Gcsh, Pkd1l2, Bcmo1, Gan, 4933407C03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287F17.bB6Ng01-287F17.g
ACCGA085306GA085307
length1,171699
definitionB6Ng01-287F17.b B6Ng01-287F17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,879,780 - 118,880,948)(118,714,797 - 118,715,493)
sequence
gaattcagtgctttgttagaggagggcatgctgggagatcagaatagggc
atgctgggagatcagaaaaggctttccagagggagaagttgttaagcaat
gatgaagggatgagcaggccgttgcttgaggagaacgatggaagagcaga
aacttttagccagcaactcagtcactatggacatttccatgattgttttc
atggctttgtctgtcccatttccagtcctctcgtggctcctcttcctcca
tcttcctctccccatggctcctcttcctccttcatcttcctcttgcattt
ccattctactctctcttctttccccactgctttctgtgaataatttgaag
gcaaattattatattactgtattatatattattatattattattatattc
atctgtatctgcttgatcctaatgctggatattcactggtctaacatcgt
atagaagtctgcattgacttctatattcgagcacacacacacacacacac
acacacacacacacacacacacacacacttcttctccccaggtatcttgt
ataaggttctcttgggggatgctgcaggcttccttgtcacataccagctt
tggaatacataaaaacatcattcgttgaggcaaacttcaatcccagaatg
tctggagttagaaacatctctggcttttaatttttaattttttttttaaa
ttcaggcatacataatcttattagagacgtagctctctgggctgaagaat
tccttttggtttctttgatccagggcacacttttgagttcagggagttca
gctgctcaagccctaaaaatatcaagctacctccttgctgacctgagagg
gcaatttctctcattttttggtgagaggtctggaccttcatgaagacctg
tcctccatccctagttcagaaaaaaagtagggagcagaaagcacattgta
ctattatgccaaagtgcaccgcgaggtacttcctgctggcatgccaatta
ctatagggaatattaagttatttgcatattcaacatgtgcctcacagaca
ctccacagtaggcagcaagagggctggggaagatggtcagtcagtaagta
atggcttgtcaatataaggatactgagtttggcccctggaccctagttaa
agtagccaggttttggtgtgt
gaattcagaacagcaccgccatgcccagaattttcaaaaatttgtatact
agggatcaaactcgggtccttgtgcttgtgaggcaagcattttacagact
gctccttgtatgttctattttgcaggattaatcagacttctcaagaaatg
tgcagttttatcactttgagttcaggtatatatacttgaaagggattttt
ttttttttttttttttttttttttttaaaattcatggccctccttgattc
cttaacctttgaaatggccccagtgatccctgctctgctagcaaggttgt
cacacagcaatgaaactatggcaaaacagaagccagcagccatgcagcta
ctcctgggttctgtcggatgtcaatatcctgctatgttaccatgatttcc
tggttaggtactctgccatttgctttatcctggagggggaaaaaaaaaaa
aagagtagacgaacagaaatggggattttcctgttaatatgttaaaatcg
tacatatttgatttttccaatccttttccagtgcccagctgaatttcatc
actagcaactcgaagacccacacattcaaagattcttccaaagctcaggc
gccttctcaaatgaatcgtgaggtttcctccctgaagggtgtggcaatct
gcacttctaaatcttttataatgtactccttaagccacacaatgtggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_118879780_118880948
seq2: B6Ng01-287F17.b_49_1219 (reverse)

seq1  ACACACC-AAACCTGGCTACTTT-ACTTGGGTTCTGGGGGACCAAACTCA  48
      ||||||| ||||||||||||||| ||| |||| | ||||  |||||||||
seq2  ACACACCAAAACCTGGCTACTTTAACTAGGGTCCAGGGG--CCAAACTCA  48

seq1  G-ATCCTTATATTTACAAGCCAATTACTTTACTGACTGAACCATCTTCCC  97
      | ||||||||||| ||||||| ||||| |||||||||| |||||||||||
seq2  GTATCCTTATATTGACAAGCC-ATTAC-TTACTGACTG-ACCATCTTCCC  95

seq1  CAGCCCTCCTGCTGCCTACCTGT-GAGTGTCTGTGA-GCACATG-TGTAT  144
      |||||||| ||||||||| |||| |||||||||||| ||||||| || ||
seq2  CAGCCCTCTTGCTGCCTA-CTGTGGAGTGTCTGTGAGGCACATGTTGAAT  144

seq1  ATGCAAATAACTTAATATTCCTTATAGTAATTGGCATGCCAGCAGGAAGT  194
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGCAAATAACTTAATATTCCCTATAGTAATTGGCATGCCAGCAGGAAGT  194

seq1  ACCTCGC-GTGCACTTTGGCAATATAGTACAATGTGCTTTCTGCTCCCTA  243
      ||||||| |||||||||||||  |||||||||||||||||||||||||||
seq2  ACCTCGCGGTGCACTTTGGCATAATAGTACAATGTGCTTTCTGCTCCCTA  244

seq1  CTTTTTTTTCTGAACTAGGGATGGA-GACAGGTCTTCATGAAGGTCCAGA  292
      | ||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  C-TTTTTTTCTGAACTAGGGATGGAGGACAGGTCTTCATGAAGGTCCAGA  293

seq1  CCTCTCACC-AAAAATGAGAGAAATTGCCCTCTCAGGTCAGCAAGGAGGT  341
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCACCAAAAAATGAGAGAAATTGCCCTCTCAGGTCAGCAAGGAGGT  343

seq1  AGCTTGATATTTTTAGGGCTTGAGCAGCTGAACTCCCTGAACTCAAAAGT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGATATTTTTAGGGCTTGAGCAGCTGAACTCCCTGAACTCAAAAGT  393

seq1  GTGCCCTGGATCAAAGAAACCAAAAGGAATTCTTCAGCCCAGAGAGCTAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCTGGATCAAAGAAACCAAAAGGAATTCTTCAGCCCAGAGAGCTAC  443

seq1  GTCTCTAATAAGATTATGTATGCCTGAATTTAAAAAAAAAATTAAAAATT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAATAAGATTATGTATGCCTGAATTTAAAAAAAAAATTAAAAATT  493

seq1  AAAAGCCAGAGATGTTTCTAACTCCAGACATTCTGGGATTGAAGTTTGCC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCAGAGATGTTTCTAACTCCAGACATTCTGGGATTGAAGTTTGCC  543

seq1  TCAACGAATGATGTTTTTATGTATTCCAAAGCTGGTATGTGACAAGGAAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGAATGATGTTTTTATGTATTCCAAAGCTGGTATGTGACAAGGAAG  593

seq1  CCTGCAGCATCCCCCAAGAGAACCTTATACAAGATACCTGGGGAGAAGAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGCATCCCCCAAGAGAACCTTATACAAGATACCTGGGGAGAAGAA  643

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTC  693

seq1  GAATATAGAAGTCAATGCAGACTTCTATACGATGTTAGACCAGTGAATAT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAGAAGTCAATGCAGACTTCTATACGATGTTAGACCAGTGAATAT  743

seq1  CCAGCATTAGGATCAAGCAGATACAGATGAATATAATAATAATATAATAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATTAGGATCAAGCAGATACAGATGAATATAATAATAATATAATAA  793

seq1  TATATAATACAGTAATATAATAATTTGCCTTCAAATTATTCACAGAAAGC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAATACAGTAATATAATAATTTGCCTTCAAATTATTCACAGAAAGC  843

seq1  AGTGGGGAAAGAAGAGAGAGTAGAATGGAAATGCAAGAGGAAGATGAAGG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGAAAGAAGAGAGAGTAGAATGGAAATGCAAGAGGAAGATGAAGG  893

seq1  AGGAAGAGGAGCCATGGGGAGAGGAAGATGGAGGAAGAGGAGCCACGAGA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGGAGCCATGGGGAGAGGAAGATGGAGGAAGAGGAGCCACGAGA  943

seq1  GGACTGGAAATGGGACAGACAAAGCCATGAAAACAATCATGGAAATGTCC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGGAAATGGGACAGACAAAGCCATGAAAACAATCATGGAAATGTCC  993

seq1  ATAGTGACTGAGTTGCTGGCTAAAAGTTTCTGCTCTTCCATCGTTCTCCT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGACTGAGTTGCTGGCTAAAAGTTTCTGCTCTTCCATCGTTCTCCT  1043

seq1  CAAGCAACGGCCTGCTCATCCCTTCATCATTGCTTAACAACTTCTCCCTC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAACGGCCTGCTCATCCCTTCATCATTGCTTAACAACTTCTCCCTC  1093

seq1  TGGAAAGCCTTTTCTGATCTCCCAGCATGCCCTATTCTGATCTCCCAGCA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGCCTTTTCTGATCTCCCAGCATGCCCTATTCTGATCTCCCAGCA  1143

seq1  TGCCCTCCTCTAACAAAGCACTGAATTC  1169
      ||||||||||||||||||||||||||||
seq2  TGCCCTCCTCTAACAAAGCACTGAATTC  1171

seq1: chr8_118714797_118715493
seq2: B6Ng01-287F17.g_69_766

seq1  GAATTCAGAACAGCACCGCCATGCCCAGAATTTTCAAAAATTTGTATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACAGCACCGCCATGCCCAGAATTTTCAAAAATTTGTATACT  50

seq1  AGGGATCAAACTCGGGTCCTTGTGCTTGTGAGGCAAGCATTTTACAGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCAAACTCGGGTCCTTGTGCTTGTGAGGCAAGCATTTTACAGACT  100

seq1  GCTCCTTGTATGTTCTATTTTGCAGGATTAATCAGACTTCTCAAGAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTGTATGTTCTATTTTGCAGGATTAATCAGACTTCTCAAGAAATG  150

seq1  TGCAGTTTTATCACTTTGAGTTCAGGTATATATACTTGAAAGGGATTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTTTATCACTTTGAGTTCAGGTATATATACTTGAAAGGGATTTTT  200

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTAAGATTCATGGCCCTCCTTGATTC  250
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTTTAAAATTCATGGCCCTCCTTGATTC  250

seq1  CTTAACCTTTGAAATGGCCCCAGTGATCCCTGCTCTGCTAGCAAGGTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACCTTTGAAATGGCCCCAGTGATCCCTGCTCTGCTAGCAAGGTTGT  300

seq1  CACACAGCAATGAAACTATGGCAAAACAGAAGCCAGCAGCCATGCAGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGCAATGAAACTATGGCAAAACAGAAGCCAGCAGCCATGCAGCTA  350

seq1  CTCCTGGGTTCTGTCGGATGTCAATATCCTGCTATGTTACCATGATTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGGTTCTGTCGGATGTCAATATCCTGCTATGTTACCATGATTTCC  400

seq1  TGGTTAGGTACTCTGCCATTTGCTTTATCCTGGAGGGGGAAAAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAGGTACTCTGCCATTTGCTTTATCCTGGAGGGGGAAAAAAAAAAA  450

seq1  AAGAGTAGACGAACAGAAATGGGGATTTTCCTGTTAATATGTTAGAATCG  500
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAGAGTAGACGAACAGAAATGGGGATTTTCCTGTTAATATGTTAAAATCG  500

seq1  TACATATTTGATTTTTCCAATCCTTTTCCAGTGCCCAGCTGAATTTCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTTGATTTTTCCAATCCTTTTCCAGTGCCCAGCTGAATTTCATC  550

seq1  ACTAGCAACTCGAAGACCCACACATTCAAAGATTCTTCCAGAGCTCAGGC  600
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACTAGCAACTCGAAGACCCACACATTCAAAGATTCTTCCAAAGCTCAGGC  600

seq1  GCCTTCTCAAATGAATCGTGAGGTTTCCTCCCTGAAGGGTGTGGCAATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTCAAATGAATCGTGAGGTTTCCTCCCTGAAGGGTGTGGCAATCT  650

seq1  GCACTTCTAAATC-TTTATAATGTACTCCTTAAGCCACACAATGTGGT  697
      ||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCACTTCTAAATCTTTTATAATGTACTCCTTAAGCCACACAATGTGGT  698