MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-291C17
Chromosome	8 (Build37)
Map Location	5,149,242 - 5,149,986
singlet/doublet	singlet
Overlap gene	none
Upstream gene	B130050I23Rik, BC068157, Lrrc8e, Map2k7, LOC100039590, Snapc2, Ctxn1, Timm44, Elavl1, Ccl25, LOC664977, Ppia-ps8_36.1, Lass4, Vmn2r-ps89, EG633533, BC003267, LOC665021, EG623133, EG665044, EG623223, LOC100040234, Shcbp1, EG622568, LOC669393, EG631359, LOC100039687, LOC436026, Slc10a2, LOC434275
Downstream gene	LOC623409, LOC669429, LOC100040360
Link	Open Mouse BAC browser

Click to get alignment info.

name	B130050I23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213027 MGI:2442167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC068157 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73072 MGI:3605626
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrc8e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72267 MGI:1919517
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Map2k7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26400 MGI:1346871
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100039590 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039590
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Snapc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102209 MGI:1914861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctxn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330695 MGI:88566
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Timm44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21856 MGI:1343262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Elavl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15568 MGI:1100851
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccl25 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20300 MGI:1099448
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664977 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 7 Proteins pseudo : _no_value

name	Ppia-ps8_36.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606543
definition	note : peptidylprolyl isomerase A pseudogene 8_36.1 pseudo : _no_value

name	Lass4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67260 MGI:1914510
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vmn2r-ps89 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674360
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	EG633533 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:633533 MGI:3643234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	BC003267 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233987 MGI:2385298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665021 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665021
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 60 Proteins pseudo : _no_value

name	EG623133 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623133 MGI:3648540
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 77 ESTs, 5 Proteins

name	EG665044 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665044 MGI:3645338
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	EG623223 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623223 MGI:3643419
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100040234 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 184 ESTs, 13 Proteins pseudo : _no_value

name	Shcbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20419 MGI:1338802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622568 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622568 MGI:3647382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins

name	LOC669393 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669393
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins

name	EG631359 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:631359 MGI:3648110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 884 ESTs, 10 Proteins

name	LOC100039687 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039687
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	LOC436026 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:436026
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	Slc10a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20494 MGI:1201406
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC434275 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 46 ESTs, 1 Protein pseudo : _no_value

name	LOC623409 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623409
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC669429 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669429
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 359 ESTs, 10 Proteins pseudo : _no_value

name	LOC100040360 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040360
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	B130050I23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111074547 GeneID:213027 MGI:2442167
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B130050I23 gene transcript_id : NM_001039578.2

name	BC068157 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402166 GeneID:73072 MGI:3605626
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC068157 transcript_id : NM_207203.1

name	Lrrc8e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51890210 GeneID:72267 MGI:1919517
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 8 family, member E transcript_id : NM_028175.1

name	Map2k7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347550 GeneID:26400 MGI:1346871
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase kinase 7 transcript_id : NM_011944.2

name	Map2k7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347548 GeneID:26400 MGI:1346871
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase kinase 7 transcript_id : NM_001042557.1

name	LOC100039590 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258336 GeneID:100039590
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : similar to transforming growth factor, beta receptor III (betaglycan, 300kDa) transcript_id : XM_001473149.1

name	Snapc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527187 GeneID:102209 MGI:1914861
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : small nuclear RNA activating complex, polypeptide 2 transcript_id : NM_133968.1

name	Ctxn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34304000 GeneID:330695 MGI:88566
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cortexin 1 transcript_id : NM_183315.1

name	Timm44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19705562 GeneID:21856 MGI:1343262
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocase of inner mitochondrial membrane 44 transcript_id : NM_011592.1

name	Elavl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032046 GeneID:15568 MGI:1100851
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) transcript_id : NM_010485.3

name	Ccl25 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892127 GeneID:20300 MGI:1099448
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-C motif) ligand 25 transcript_id : NM_009138.2

name	Lass4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366644 GeneID:67260 MGI:1914510
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : longevity assurance homolog 4 (S. cerevisiae) transcript_id : NM_026058.3

name	BC003267 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345833 GeneID:233987 MGI:2385298
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC003267 transcript_id : NM_145591.3

name	EG623133 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383010 GeneID:623133 MGI:3648540
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 77 ESTs, 5 Proteins product : predicted gene, EG623133 transcript_id : XM_887570.2

name	EG665044 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383012 GeneID:665044 MGI:3645338
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : predicted gene, EG665044 transcript_id : XM_974151.1

name	EG623223 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383014 GeneID:623223 MGI:3643419
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG623223 transcript_id : XM_897595.2

name	Shcbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803091 GeneID:20419 MGI:1338802
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Shc SH2-domain binding protein 1 transcript_id : NM_011369.2

name	EG622568 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383019 GeneID:622568 MGI:3647382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : predicted gene, EG622568 transcript_id : XM_889268.2

name	LOC669393 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258339 GeneID:669393
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins product : similar to ribosomal protein L22 transcript_id : XM_001473319.1

name	EG631359 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258367 GeneID:631359 MGI:3648110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 884 ESTs, 10 Proteins product : predicted gene, EG631359 transcript_id : XM_905139.3

name	LOC100039687 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258341 GeneID:100039687
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : similar to pol protein transcript_id : XM_001473341.1

name	Slc10a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893012 GeneID:20494 MGI:1201406
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 10, member 2 transcript_id : NM_011388.2

name	B130050I23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111074548 GeneID:213027 MGI:2442167
definition	codon_start : 1 note : ecotropic viral integration site 5-like product : hypothetical protein LOC213027 protein_id : NP_001034667.2

name	BC068157 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402167 GeneID:73072 MGI:3605626
definition	codon_start : 1 product : hypothetical protein LOC73072 protein_id : NP_997086.1

name	Lrrc8e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51890211 CCDS:CCDS22079.1 GeneID:72267 MGI:1919517
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : leucine rich repeat containing 8 family, member E protein_id : NP_082451.1

name	Map2k7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347549 GeneID:26400 MGI:1346871
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; protein kinase, mitogen activated, kinase 7; MAP kinase kinase 7 product : mitogen activated protein kinase kinase 7 isoform 1 protein_id : NP_001036022.1

name	Map2k7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347551 GeneID:26400 MGI:1346871
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 function : activates JNK group of MAP kinases note : isoform 2 is encoded by transcript variant 2; protein kinase, mitogen activated, kinase 7; MAP kinase kinase 7 product : mitogen activated protein kinase kinase 7 isoform 2 protein_id : NP_036074.2

name	LOC100039590 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258337 GeneID:100039590
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473199.1

name	Snapc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527188 CCDS:CCDS22081.1 GeneID:102209 MGI:1914861
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : small nuclear RNA activating complex, polypeptide 2 protein_id : NP_598729.1

name	Ctxn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34304001 GeneID:330695 MGI:88566
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : cortexin product : cortexin 1 protein_id : NP_899138.1

name	Timm44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19705563 CCDS:CCDS22083.1 GeneID:21856 MGI:1343262
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005744 - mitochondrial inner membrane presequence translocase complex [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0015450 - protein translocase activity [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : translocator of inner mitochondrial membrane 44 protein_id : NP_035722.1

name	Elavl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542602 CCDS:CCDS22084.1 GeneID:15568 MGI:1100851
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0048255 - mRNA stabilization [Evidence IMP] codon_start : 1 note : HU-antigen A product : ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) protein_id : NP_034615.2

name	Ccl25 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677881 CCDS:CCDS22085.1 GeneID:20300 MGI:1099448
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IDA]; GO:0005125 - cytokine activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006935 - chemotaxis [Evidence IDA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0050900 - leukocyte migration [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : small inducible cytokine A25; small inducible chemokine 25 product : chemokine (C-C motif) ligand 25 protein_id : NP_033164.1

name	Lass4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541930 CCDS:CCDS22086.1 GeneID:67260 MGI:1914510
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA] GO_process : GO:0046513 - ceramide biosynthesis [Evidence IDA]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : longevity assurance homolog 4 protein_id : NP_080334.2

name	BC003267 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704192 GeneID:233987 MGI:2385298
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC233987 protein_id : NP_663566.1

name	EG623133 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383011 GeneID:623133 MGI:3648540
definition	codon_start : 1 product : hypothetical protein protein_id : XP_892663.2

name	EG665044 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383013 GeneID:665044 MGI:3645338
definition	codon_start : 1 product : hypothetical protein protein_id : XP_979245.1

name	EG623223 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82916419 GeneID:623223 MGI:3643419
definition	codon_start : 1 product : hypothetical protein protein_id : XP_902688.1

name	Shcbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755508 CCDS:CCDS22088.1 GeneID:20419 MGI:1338802
definition	GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0042169 - SH2 domain binding [Evidence IDA] codon_start : 1 product : Shc SH2-domain binding protein 1 protein_id : NP_035499.1

name	EG622568 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149258366 GeneID:622568 MGI:3647382
definition	codon_start : 1 product : similar to protein kinase inhibitor gamma protein_id : XP_894361.2

name	LOC669393 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258340 GeneID:669393
definition	codon_start : 1 product : similar to ribosomal protein L22 protein_id : XP_001473369.1

name	EG631359 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82916218 GeneID:631359 MGI:3648110
definition	codon_start : 1 product : hypothetical protein protein_id : XP_910232.1

name	LOC100039687 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258342 GeneID:100039687
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001473391.1

name	Slc10a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755530 CCDS:CCDS22089.1 GeneID:20494 MGI:1201406
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 10, member 2 protein_id : NP_035518.1

name	Vmn2r-ps89 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674360
definition	number : 3 pseudo : _no_value

name	Vmn2r-ps89 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674360
definition	number : 2 pseudo : _no_value

name	Vmn2r-ps89 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674360
definition	number : 1 pseudo : _no_value

name	EG633533 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633533
definition	number : 1 pseudo : _no_value

name	EG633533 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633533
definition	number : 2 pseudo : _no_value

name	EG633533 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633533
definition	number : 3 pseudo : _no_value

name	LOC436026 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:436026
definition	number : 1 pseudo : _no_value

name	LOC623409 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623409
definition	number : 1 pseudo : _no_value

name	LOC100040360 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040360
definition	number : 1 pseudo : _no_value

name	LOC664977 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258338 GeneID:664977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 7 Proteins product : similar to ribosomal protein L32 pseudo : _no_value transcript_id : XR_031087.1

name	LOC665021 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258362 GeneID:665021
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 60 Proteins product : similar to putative serine/threonine kinase NDR54 pseudo : _no_value transcript_id : XR_031561.1

name	LOC100040234 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258365 GeneID:100040234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 184 ESTs, 13 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_031593.1

name	LOC434275 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258368 GeneID:434275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 46 ESTs, 1 Protein product : similar to 1700023B02Rik protein pseudo : _no_value transcript_id : XR_031660.1

name	LOC669429 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258343 GeneID:669429
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 359 ESTs, 10 Proteins product : similar to neuroleukin pseudo : _no_value transcript_id : XR_031193.1

clone name	MSMg01-170N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426C20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-426C21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-155O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360H04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-493A23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-414E03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-508N12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-177K05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-424G06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-106I21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-139L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374A18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-184C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176E01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-176G01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-496A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286A06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-291C17.b	B6Ng01-291C17.g
ACC	GA088129	GA088130
length	1,231	981
definition	B6Ng01-291C17.b	B6Ng01-291C17.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgtttagctctgatccccattttttaattggggttatttgat tttctggagtccaccttcttgagttctttatatgatattggatattggtc ccctatctgatttagtaaagatcctttcccaacctgttttggtggccttt ttgttttattgacagtgtcttttgccttacagaagctttgcaattttatg agaacccatttgtcaattctcgatcttacagcacaagccactgctgttct attcaggaatttttcccttgtgcccttatcttcgaggcttttccccacat tgtcttctataagtttcactgtctctggttttatgtggagttccttgatc caattagatttgaccttagtacaaggagataggaatggatcaattcgcat tcttctacatgataactgccagttgtgccagcacatggctgagaagcacc tgaaaaaaaatgttcagcatccttaatcatcagggaaatgcaaatcaaaa caaccctgagattccacctcacaccagtcagaatggctaagatcaaaaat tcaggtgacagcagatgctgaaaaggatgtggagaaagaggaagactcct ccattgttggtgggattgcaagcttttacgactactctggaaatcattct ggtggttcctcagaaaatttgacatagtactacaggaggaccccacaata cctctccttggcatatatccagaagatgttccaactggtaggaagaacac atgttacactatgttcatagcagcctaattcataatagccagaagctgga aagaacccagatgcccctcaacagaggaatggatacagaaaatgtggtac atttacacaatggagtactactcagctattaaaaagaatgaatttatgaa attcctaggcaaatggatggacctggagggcatcatcctgaatgagtaac ccatcacaaaagactcacatgatttgtactcactgataagtggatataag cccagaaacttagatacccagatataagaatcatttgccaaacaccatgg aaactccagagaccgaagacccagtatgggaccacttggcccctctttag aatggacaaaaccccatgaagatttagagacaaagttggcttgaatgaag gatgaccactccagagacatcctacgatctccatacgcctcaaatgcgta cacattgccatacccttgacagaatttgcga	gaattccttacccaaacatatatgaaataataagtgcttattgagcaatt aagtattgacactttgttattgaaacatggataataaatactatagaata cagatacagtatatgtgtcagtttaaattaatttataggtttggaaggga aattttgaatgttcaagaaaataattctagaaactaagcatgcataattt tgctttattggtcaatatactatgaaagaagcaataataaaatagaaaaa aaaaagcccaggaccagatggatttagtgcagagttctatcagaccttca gagaagacctaataccaatatgcctcaaactattgcacaaaatagaaata aaaggtactctacccaattcattctatgaagccacaattgctctgatacc taaaccacacaaagactcaacaaagaaagagatcttcagacgaatttcca tcatgaatatcaatgcaaaaatattcaataaaattcttgccaactaaatc caaggatacattaaaacaaacatccatcatgatcaagtaagcttcattcc agggtttcagggacggttcaatttatggaaagccatcaacataatccaat ctataaactaattcaaagaaaaaaaaacacaggactatctcattagatgc tgtgaaagcatttgacaaagtccaacaccctttcataaaaaaagtcttag aaagatcaggaattcaaggcccaaacctaaacatactaaatgcaatatac agcaaactagtagccaacatcaaactaaatggtgagatactgaaagcaat cacactgaaatcatggactagacaaggctgcccactctctccctatctat tcaatatagtacttgaaatcatgcccagagcaattagacaacaaaaggag ataaaaggagtataatttgggaaaggaagaagtcaaaatatcactatttg caaatgatatgatagtgtacataactgaccc
quality values	Open. Hide. 58 36 18 28 62 62 47 62 62 35 49 62 36 33 47 62 62 62 62 62 44 44 62 62 62 59 43 62 62 62 62 62 59 50 51 59 56 49 38 54 54 59 62 62 59 62 62 62 59 59 62 54 62 62 59 62 62 62 62 62 62 59 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 54 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 54 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 49 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 54 49 62 62 54 52 54 58 58 58 54 54 54 58 45 54 54 58 58 58 58 58 54 54 58 58 51 58 54 58 50 58 54 54 52 58 58 58 54 54 58 58 49 54 58 58 58 54 52 54 54 58 49 52 54 54 58 48 58 54 54 58 58 58 40 49 24 28 58 58 58 58 58 46 58 58 54 41 58 48 58 58 58 42 54 47 54 52 49 47 48 51 46 51 58 58 41 54 58 58 50 58 58 48 37 26 58 51 52 50 53 52 51 58 58 58 50 46 41 30 58 40 41 40 51 51 51 47 30 45 54 58 39 40 53 34 49 58 52 46 51 49 39 50 49 32 53 52 50 50 46 50 31 58 38 49 42 40 58 49 50 40 50 42 53 42 50 35 46 46 52 40 51 32 38 46 31 17 41 49 19 54 46 49 32 49 22 50 51 40 33 43 50 50 50 47 46 52 32 58 52 32 32 50 41 53 52 50 37 42 27 40 51 44 14 49 21 51 37 37 42 53 23 33 49 40 54 54 42 41 30 38 22 35 32 51 25 24 27 41 32 53 53 50 49 28 49 30 47 53 29 37 52 41 27 32 29 47 37 28 39 32 29 41 44 34 32 32 53 53 28 27 42 42 37 40 33 17 47 34 23 37 41 39 29 35 34 32 31 29 52 41 32 27 9 10 40 32 28 20 45 23 32 28 32 32 45 53 32 28 32 32 31 19 52 18 42 38 31 28 24 29 15 27 25 32 21 20 42 51 46 31 31 37 23 29 33 32 35 31 25 42 51 41 33 31 19 31 29 24 30 30 33 31 13 31 29 31 38 28 34 42 30 17 29 32 31 16 18 31 29 46 46 46 33 26 38 17 21 31 24 27 25 44 33 21 27 19 31 46 30 26 37 25 33 32 37 27 27 18 32 46 23 31 30 27 26 21 32 25 30 24 29 31 13 25 20 17 44 30 14 17 21 30 24 33 21 30 25 25 21 26 30 31 10 5 11 24 24 24 33 12 36 11 24 12 9 17 44 44 31 14 43 6 18 22 9 11 15 32 27 32 25 47 20 24 24 14 31 32 32 22 26 18 30 19 27 19 32 18 13 19 32 10 11 6 12 7 26 19 29 37 17 17 13 19 43 13 14 16 21 24 8 24 4 8 20 32 22 6 3 6 5 5 8 7 21 9 13 17 5 5 3 3 47 21 13 9 7 32 47 30 4 3 6 19 20 14 9 7 22 34 13 11 15 7 6 27 9 27 5 30 9 11 4 15 20 8 28 17 19 11 12 8 14 5 13 8 26 10 7 4 4 4 6 10 15 6 5 16 26 25 11 14 6 7 12 18 8 5 6 15 13 8 8 6 6 15 12 7 5 7 16 28 25 15 9 8 2 3 13 10 7 25 15 5 1 4 5 4 9 8 23 8 3 3 11 5 1 3 3 7 9 23 15 6 4 15 17 12 7 13 7 20 4 6 5 7 5 3 3 4 4 4 14 9 16 10 5 4 11 11 1 2 3 3 2 2 5 5 12 3 4 1 10 6 4 9 21 5 6 3 11 15 8 13 13 4 3 2 5 6 7 6 4 8 5 5 5 1 2 4 21 18 4 5 3 4 7 12 5 5 5 3 5 3 16 3 2 3 2	Open. Hide. 62 59 59 59 62 62 62 62 62 62 62 56 49 20 28 28 29 29 50 59 59 59 59 54 42 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 49 42 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 56 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 58 58 54 54 58 58 58 49 54 58 58 54 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 54 58 58 58 58 58 58 54 54 54 58 58 58 58 54 58 54 58 58 52 54 58 58 58 58 58 58 53 58 58 58 45 43 58 58 58 58 51 43 47 58 58 49 52 58 58 58 58 58 58 54 47 58 49 58 58 58 58 58 58 58 58 48 58 58 45 47 58 58 58 51 49 51 50 58 49 54 49 49 48 54 54 52 50 58 51 52 58 58 58 58 58 58 58 58 50 51 49 58 50 39 58 39 40 53 50 58 44 58 52 52 51 47 41 50 51 41 58 50 51 58 51 51 36 39 51 50 49 25 37 54 54 51 37 28 50 58 58 50 50 50 41 37 44 50 41 44 33 39 52 53 43 39 37 50 37 54 54 54 54 54 40 41 40 45 53 50 46 26 49 49 44 45 41 32 39 42 24 46 49 34 41 52 45 32 33 44 54 23 49 44 35 52 38 46 42 39 25 44 22 44 30 53 37 52 37 40 54 47 42 52 31 31 33 38 32 52 31 40 32 40 45 31 51 51 31 45 31 33 39 34 26 40 40 29 32 33 28 53 40 29 52 32 32 31 24 51 29 31 38 51 30 40 31 31 36 27 31 31 31 45 31 51 30 31 32 31 31 31 39 32 45 21 33 30 30 33 51 34 31 32 32 34 41 46 21 24 30 31 18 32 30 21 31 41 46 35 38 31 30 46 20 25 31 31 31 31 30 31 31 46 31 31 31 31 36 30 33 31 32 32 26 27 29 32 34 31 31 31 31 27 30 22 32 35 46 29 32 32 23 29 32 31 46 32 26 32 29 12 18 11 21 37 37 33 23 32 22 24 14 21 27 44 48 12 13 8 31 15 32 23 27 43 43 19 29 16 29 23 31 18 15 12 33 17 47 34 10 39 9 33 48 18 17 22 15 29 23 29 24 27 34 32 21 48 43 20 16 14 21 21 22 27 32 25 30 48 24 31 34 22 43 19 24 34 33 17 21 31 28 16 18 26 24 20 27 12 18 19 14 28 11 19 13 21 28 28 13 28 28

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_5149242_5149986
seq2: B6Ng01-291C17.g_67_811

seq1  GAATTCCTTACCCAAACATATATGAAATAATAAGTGCTTATTGAGCAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTACCCAAACATATATGAAATAATAAGTGCTTATTGAGCAATT  50

seq1  AAGTATTGACACTTTGTTATTGAAACATGGATAATAAATACTATAGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTGACACTTTGTTATTGAAACATGGATAATAAATACTATAGAATA  100

seq1  CAGATACAGTATATGTGTCAGTTTAAATTAATTTATAGGTTTGGAAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACAGTATATGTGTCAGTTTAAATTAATTTATAGGTTTGGAAGGGA  150

seq1  AATTTTGAATGTTCAAGAAAATAATTCTAGAAACTAAGCATGCATAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGAATGTTCAAGAAAATAATTCTAGAAACTAAGCATGCATAATTT  200

seq1  TGCTTTATTGGTCAATATACTATGAAAGAAGCAATAATAAAATAGAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTATTGGTCAATATACTATGAAAGAAGCAATAATAAAATAGAAAAA  250

seq1  AAAAAGCCCAGGACCAGATGGATTTAGTGCAGAGTTCTATCAGACCTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCCCAGGACCAGATGGATTTAGTGCAGAGTTCTATCAGACCTTCA  300

seq1  GAGAAGACCTAATACCAATATGCCTCAAACTATTGCACAAAATAGAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGACCTAATACCAATATGCCTCAAACTATTGCACAAAATAGAAATA  350

seq1  AAAGGTACTCTACCCAATTCATTCTATGAAGCCACAATTGCTCTGATACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTACTCTACCCAATTCATTCTATGAAGCCACAATTGCTCTGATACC  400

seq1  TAAACCACACAAAGACTCAACAAAGAAAGAGATCTTCAGACGAATTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCACACAAAGACTCAACAAAGAAAGAGATCTTCAGACGAATTTCCA  450

seq1  TCATGAATATCAATGCAAAAATATTCAATAAAATTCTTGCCAACTAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAATATCAATGCAAAAATATTCAATAAAATTCTTGCCAACTAAATC  500

seq1  CAAGGATACATTAAAACAAACATCCATCATGATCAAGTAAGCTTCATTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATACATTAAAACAAACATCCATCATGATCAAGTAAGCTTCATTCC  550

seq1  AGGGTTTCAGGGACGGTTCAATTTATGGAAAGCCATCAACATAATCCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCAGGGACGGTTCAATTTATGGAAAGCCATCAACATAATCCAAT  600

seq1  CTATAAACTAATTCAAAGAAAAAAAAACACAGGACTATCTCATTAGATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAACTAATTCAAAGAAAAAAAAACACAGGACTATCTCATTAGATGC  650

seq1  TGTGAAAGCATTTGACAAAGTCCAACACCCTTTCATAAAAAAAGTCTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAGCATTTGACAAAGTCCAACACCCTTTCATAAAAAAAGTCTTAG  700

seq1  AAAGATCAGGAATTCAAGGCCCAAACCTAAACATACTAAATGCAA  745
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCAGGAATTCAAGGCCCAAACCTAAACATACTAAATGCAA  745

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information