BAC Information

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BAC

Clone NameB6Ng01-295D11
Chromosome8 (Build37)4 (Build37)
Map Location 116,744,294 - 116,745,44242,396,927 - 42,397,048
singlet/doubletsingletsinglet
Overlap geneAI427515
Upstream geneMon1b, 4930481F22Rik, Adamts18, Nudt7
Downstream geneClec3a, Wwox
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295D11.bB6Ng01-295D11.g
ACCGA091141GA091142
length1,158185
definitionB6Ng01-295D11.b B6Ng01-295D11.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(116,744,294 - 116,745,442)(42,396,927 - 42,397,048)
sequence
gaattccccaatcaatctaaagttgtttttccctagcttaccattttctt
attaatgggattattgccccacccagatcctttcctctatgacatgaaca
gtgatgatggatgctattaggaaaggctatagctgcatgagttctttatt
gctagtgtgtctgggaaaagaactacattcctatcatctgtctaaattag
tattcaagacatgctccaatggtattttcaccatgtaataaaatagccaa
agagacatattgagaatgtaaatatccagaaccagttttcaacagataca
gaagagcatggcacaaataagctgtctttgatgccaagactaacgctttt
gatttgggagactttgaggtatttatctactcaacccttgggagaggcag
gaggtatttgttcctatgatggttgctgaaaaggttaacatctctatgtt
ccatgttgtgcgctaaccaaggcgtgagctccagaagagttcttggcagc
agttgctcgtatggaacattcattctcatccaatttagattcaacagacc
ctctgtgttttgggggttggctaggcaatgatgttacaacactgacagtg
acatctgcacctcccaggagttcagagctcagcaaaataaatgactacac
agtatgacaattccacaagaggctgctatacaagggtcacagccagcatg
gagaaagtagctattaacttgtctcattgagattgggtgcttcacaaatg
gaagaattggatggacgtgctcttatatccattcttcaaaccctctggct
ctaacccacctctccacggagaggaaaaaggcttcagcgtgaccccagtt
tgatttcttcataaaagctatcaaaggcacaggagtcccaagcaaaaaca
gtccactgttgctatagtaggacagttatttcccaggacgttgctaccga
ttacaagatgtataagaaaactattgtttcaataggacaaatggagagag
gttaaaagactagcatgggttacgtctatgtcatccctaaggtaatgggg
acagcctctatctagcctccgcccatatttgtagccactggacatacaat
acagaatacccaaaccacttgaatgtgttcatgtgcctgaatcagtagtc
cactttta
ttagagcttttcagagggtctataaatgctaggaaccctgagcgtgttga
ttggatgttcattggtttttgattgtttgttggttgctgttggtcactgt
ttgttaagtagttgcaagaaagaaagagagagagagagagagagagagag
agagagagagaggaaggaaggaaggaaggaaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_116744294_116745442
seq2: B6Ng01-295D11.b_46_1203 (reverse)

seq1  TAAAAGT-GACTACTGTATTCAGCCACAATGACCACATTTTAAGTG--TT  47
      ||||||| |||||||| |||||| ||| |||| |||| || |||||  ||
seq2  TAAAAGTGGACTACTG-ATTCAGGCAC-ATGAACACA-TTCAAGTGGTTT  47

seq1  TGGTA-TCTGTA-TGTATGTCCAGTGGCTAC-AATATTGGC-GAGCCTAG  93
       |||| |||||| |||||||||||||||||| ||||| ||| ||| ||||
seq2  GGGTATTCTGTATTGTATGTCCAGTGGCTACAAATATGGGCGGAGGCTAG  97

seq1  ATAGAGGCTGTTCCCATTACCCTA-GGATGACATAGACGTAA-CCATGCT  141
      ||||||||||| ||||||||| || ||||||||||||||||| |||||||
seq2  ATAGAGGCTGTCCCCATTACCTTAGGGATGACATAGACGTAACCCATGCT  147

seq1  AGTCTTT--ACCTCTCTCCATTTGTCCTATTGAAACAATAGTTTTCTTAT  189
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTTAACCTCTCTCCATTTGTCCTATTGAAACAATAGTTTTCTTAT  197

seq1  ACATCTTGTAATCGGTAGCAACGTCCTGGGAAATAACTGTCCTACTATAG  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTGTAATCGGTAGCAACGTCCTGGGAAATAACTGTCCTACTATAG  247

seq1  CAACAGTGGACTGTTTTTGCTTGGGACTCCTGTGCCTTTGATAGC-TTTA  288
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAACAGTGGACTGTTTTTGCTTGGGACTCCTGTGCCTTTGATAGCTTTTA  297

seq1  TGAAGAAATCAAACTGGGGTCACGCTGAAGCCTTTTTCCTCTCCGTGGAG  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAATCAAACTGGGGTCACGCTGAAGCCTTTTTCCTCTCCGTGGAG  347

seq1  AGGTGGGTTAGAGCCAGAGGGTTTGAAGAATGGATATAAGAGCACGTCCA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGTTAGAGCCAGAGGGTTTGAAGAATGGATATAAGAGCACGTCCA  397

seq1  TCCAATTCTTCCATTTGTGAAGCACCCAATCTCAATGAGACAAGTTAATA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTCTTCCATTTGTGAAGCACCCAATCTCAATGAGACAAGTTAATA  447

seq1  GCTACTTTCTCCATGCTGGCTGTGACCCTTGTATAGCAGCCTCTTGTGGA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTCTCCATGCTGGCTGTGACCCTTGTATAGCAGCCTCTTGTGGA  497

seq1  ATTGTCATACTGTGTAGTCATTTATTTTGCTGAGCTCTGAACTCCTGGGA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCATACTGTGTAGTCATTTATTTTGCTGAGCTCTGAACTCCTGGGA  547

seq1  GGTGCAGATGTCACTGTCAGTGTTGTAACATCATTGCCTAGCCAACCCCC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAGATGTCACTGTCAGTGTTGTAACATCATTGCCTAGCCAACCCCC  597

seq1  AAAACACAGAGGGTCTGTTGAATCTAAATTGGATGAGAATGAATGTTCCA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACAGAGGGTCTGTTGAATCTAAATTGGATGAGAATGAATGTTCCA  647

seq1  TACGAGCAACTGCTGCCAAGAACTCTTCTGGAGCTCACGCCTTGGTTAGC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGAGCAACTGCTGCCAAGAACTCTTCTGGAGCTCACGCCTTGGTTAGC  697

seq1  GCACAACATGGAACATAGAGATGTTAACCTTTTCAGCAACCATCATAGGA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAACATGGAACATAGAGATGTTAACCTTTTCAGCAACCATCATAGGA  747

seq1  ACAAATACCTCCTGCCTCTCCCAAGGGTTGAGTAGATAAATACCTCAAAG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATACCTCCTGCCTCTCCCAAGGGTTGAGTAGATAAATACCTCAAAG  797

seq1  TCTCCCAAATCAAAAGCGTTAGTCTTGGCATCAAAGACAGCTTATTTGTG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAAATCAAAAGCGTTAGTCTTGGCATCAAAGACAGCTTATTTGTG  847

seq1  CCATGCTCTTCTGTATCTGTTGAAAACTGGTTCTGGATATTTACATTCTC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTCTTCTGTATCTGTTGAAAACTGGTTCTGGATATTTACATTCTC  897

seq1  AATATGTCTCTTTGGCTATTTTATTACATGGTGAAAATACCATTGGAGCA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTCTCTTTGGCTATTTTATTACATGGTGAAAATACCATTGGAGCA  947

seq1  TGTCTTGAATACTAATTTAGACAGATGATAGGAATGTAGTTCTTTTCCCA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGAATACTAATTTAGACAGATGATAGGAATGTAGTTCTTTTCCCA  997

seq1  GACACACTAGCAATAAAGAACTCATGCAGCTATAGCCTTTCCTAATAGCA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACTAGCAATAAAGAACTCATGCAGCTATAGCCTTTCCTAATAGCA  1047

seq1  TCCATCATCACTGTTCATGTCATAGAGGAAAGGATCTGGGTGGGGCAATA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCATCACTGTTCATGTCATAGAGGAAAGGATCTGGGTGGGGCAATA  1097

seq1  ATCCCATTAATAAGAAAATGGTAAGCTAGGGAAAAACAACTTTAGATTGA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATTAATAAGAAAATGGTAAGCTAGGGAAAAACAACTTTAGATTGA  1147

seq1  TTGGGGAATTC  1149
      |||||||||||
seq2  TTGGGGAATTC  1158

seq1: chr4_42396927_42397048
seq2: B6Ng01-295D11.g_186_254 (reverse)

seq1  ATCCTTCCTTCCTTCCTTCCTTCTTTTTCTTTCTTTCTTTCTTTCTTTCT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  100
       || ||| ||| ||| ||| |||   ||||||||||||||||||||||||
seq2  ATCCTTCCTTCCTTCCTTCCTTC---CTCTCTCTCTCTCTCTCTCTCTCT  47

seq1  CTCTCTCTCTCTCTTTCTTTCT  122
      ||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTTTCTTTCT  69