BAC Information

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BAC

Clone NameB6Ng01-296A09
Chromosome8 (Build37)
Map Location 61,627,869 - 61,628,799
singlet/doubletsinglet
Overlap genenone
Upstream gene4930431L04Rik, BC030500, LOC665116
Downstream geneLOC436042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296A09.bB6Ng01-296A09.g
ACCGA091738GA091739
length9321,181
definitionB6Ng01-296A09.b B6Ng01-296A09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttattaagaagatgtcctgagtagaataagcctggaaaattcac
aggacattatgagggtttggtaatttgtcccttgccattttgtaaccagg
ctgtgtggtgaaaagagacaatccaagaaagccatggttttggattacac
ctctaacccagtaattctaggtttaggtagaagaatttgacttgaatatg
tggtgaaactctgtcaaaacaaatgaaacaatcctcaaaaaaagaaaaag
aaaacaaagtgacaagagataaaagaaaaataaaaagcaggaaagaaaag
aagatagttttaccttctggagtggccatttctatcctctgacaatctgt
gattgtacatgggagtagatttggcaagcttaaattagataagagtatgt
tttaggctgaatctgcatctagatctacaggtgttgttggagttggtcaa
aagaccttcactcacaaagaccacagagatcacaattgctacaaaccaca
agaggattttattattttttttattaatccaacatgttggggaccctcct
ctcagcatgcagacgagaggagagaccctgaacaaagaaagaacacactt
ttatacctgtaaggggcagatatggttaacagggtagctagcttattcta
attggtgtagcaagtaaccttttcaggcattggttggtttgcatagtgac
tacctctggcctagtgacttgagtcactttacttgcccccgtggtgggtt
cttatgatttggtcagcaaagcaatagtacattttgaacttatgggtcag
ctattaaagtcagagctattaagtcacagctatagacaaggccagggcag
tatgtgttcttttttttctttttttttttttttttttttgtaaatcagaa
attcagtatggcacaatggttagaatgaattt

gaattcagtggcacacgaaaagactttctgaacagaacaccaatagtgca
ggtggatcaacaattgataaatgggaccatatagaatggaaatgtttctg
tacttcaaagacaccctcatttaaatgaagcagaaggcttcaaaatgaga
agatatttttaccaactactcatactgcatagggctaacatataaactac
ttaaaaatctgaaaatcaacccaattaaaaactggtaaatagagctgaat
tcataaaagaggaacaccaaatatctgagaaatacttaaagaatgctcat
tatacttagccattaggaggatgcaaatcaatattactttgagatttcac
cttatgcccattaaaatgtccatgatctataaaatatatcacaacttgtg
ctgtataggatgtggaataaggggaccacttatccactgctgttagaatt
gcaaacttgcacatcctaggcaaacggatggacctggagagcatcatgct
gagtgagataaccaaatcacaaaggaactcacacaatatgtactcactga
taaatggatattagcccagaagcttagaatacccaagatataaaatacaa
tttgctaaacacatgaaactcaagaagaacgaagaccaaagtgtggacac
tttgccccttcttagaattgggaacaaaatacccatggaaggagttacac
agacagtttggagctgagacaaaaggatggaccatctagagactgccata
tttggggatccatccataatcagcctccaaacgctgacaccattgcatac
atggtgtcatgtattttgctgaaatattctagcaagattttgctgaaagg
acccagatatagctgtatcttgtgagactatgcaggggcctagcaaacac
agaagtggatgctcacagtcagctattgaatggatcacagggccccaatg
gaggagctagataaagtaccaaggagctaaagggatctgcaccctatagg
tggacacaatatgactaccagtacccccccaccccagagctcgtgtctct
agctgcatatatatcagaggatgactagtctgcatcagtggaaagagtcc
atgtcatgcaacctttatctggcccagtcagggcacgtcaagccagatgg
aactgtgtttggtgtgcgtaaaatgcttact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61627869_61628799
seq2: B6Ng01-296A09.b_45_976

seq1  GAATTCTTATTAAGAAGATGTCCTGAGTAGAATAAGCCTGGAAAATTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTAAGAAGATGTCCTGAGTAGAATAAGCCTGGAAAATTCAC  50

seq1  AGGACATTATGAGGGTTTGGTAATTTGTCCCTTGCCATTTTGTAACCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTATGAGGGTTTGGTAATTTGTCCCTTGCCATTTTGTAACCAGG  100

seq1  CTGTGTGGTGAAAAGAGACAATCCAAGAAAGCCATGGTTTTGGATTACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGGTGAAAAGAGACAATCCAAGAAAGCCATGGTTTTGGATTACAC  150

seq1  CTCTAACCCAGTAATTCTAGGTTTAGGTAGAAGAATTTGACTTGAATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACCCAGTAATTCTAGGTTTAGGTAGAAGAATTTGACTTGAATATG  200

seq1  TGGTGAAACTCTGTCAAAACAAATGAAACAATCCTCAAAAAAAGAAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAACTCTGTCAAAACAAATGAAACAATCCTCAAAAAAAGAAAAAG  250

seq1  AAAACAAAGTGACAAGAGATAAAAGAAAAATAAAAAGCAGGAAAGAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAGTGACAAGAGATAAAAGAAAAATAAAAAGCAGGAAAGAAAAG  300

seq1  AAGATAGTTTTACCTTCTGGAGTGGCCATTTCTATCCTCTGACAATCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGTTTTACCTTCTGGAGTGGCCATTTCTATCCTCTGACAATCTGT  350

seq1  GATTGTACATGGGAGTAGATTTGGCAAGCTTAAATTAGATAAGAGTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTACATGGGAGTAGATTTGGCAAGCTTAAATTAGATAAGAGTATGT  400

seq1  TTTAGGCTGAATCTGCATCTAGATCTACAGGTGTTGTTGGAGTTGGTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCTGAATCTGCATCTAGATCTACAGGTGTTGTTGGAGTTGGTCAA  450

seq1  AAGACCTTCACTCACAAAGACCACAGAGATCACAATTGCTACAAACCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTTCACTCACAAAGACCACAGAGATCACAATTGCTACAAACCACA  500

seq1  AGAGGATTTTATTATTTTTTTTATTAATCCAACATGTTGGGGACCCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATTTTATTATTTTTTTTATTAATCCAACATGTTGGGGACCCTCCT  550

seq1  CTCAGCATGCAGACGAGAGGAGAGACCCTGAACAAAGAAAGAACACACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCATGCAGACGAGAGGAGAGACCCTGAACAAAGAAAGAACACACTT  600

seq1  TTATACCTGTAAGGGGCAGATATGGTTAACAGGGTAGCTAGCTTATTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCTGTAAGGGGCAGATATGGTTAACAGGGTAGCTAGCTTATTCTA  650

seq1  ATTGGTGTAGCAAGTAACCTTTTCAGGCATTGGTTGGTTTGCATAGTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTGTAGCAAGTAACCTTTTCAGGCATTGGTTGGTTTGCATAGTGAC  700

seq1  TACCTCTGGCCTAGTGACTTGAGTCACTTTACTTGCCCCCGTGGTGGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTGGCCTAGTGACTTGAGTCACTTTACTTGCCCCCGTGGTGGGTT  750

seq1  CTTATGATTTGGTCAGCAAAGCAATAGTACATTTTGAACTTATGGGTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGATTTGGTCAGCAAAGCAATAGTACATTTTGAACTTATGGGTCAG  800

seq1  CTATTAAAGTCAGAGCTATTAAGTCACAGCTATAGACAAGGCCAGGGCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAAGTCAGAGCTATTAAGTCACAGCTATAGACAAGGCCAGGGCAG  850

seq1  TATGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATCA  900
      ||||||   || |||||||| ||||||||||||||||||||| | |||||
seq2  TATGTG---TTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTGTAAATCA  897

seq1  G-AATTCAGTATGGCAC-ATGG-TAG-ATGAATTT  931
      | ||||||||||||||| |||| ||| ||||||||
seq2  GAAATTCAGTATGGCACAATGGTTAGAATGAATTT  932


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