BAC Information

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BAC

Clone NameB6Ng01-298H12
Chromosome8 (Build37)
Map Location 129,132,839 - 129,297,582
singlet/doubletdoublet
Overlap genenone
Upstream gene4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891, Kcnk1, Slc35f3, LOC668434, 1810063B05Rik, EG619653, Irf2bp2
Downstream geneTomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3, EG628847
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298H12.bB6Ng01-298H12.g
ACCGA093566GA093567
length2901,132
definitionB6Ng01-298H12.b B6Ng01-298H12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,132,839 - 129,133,125)(129,296,450 - 129,297,582)
sequence
tttcagccatctgccacttggatcatccttggattcttttttatctcagt
ttgaatgtttctgttttctctttctttctttctttctttctttctttctt
tctttctttctttctctctctctctctctttttctctttctctctttctt
tctctctctttctcctcctcctccacctcctcctcttcttcgtcttcttc
ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt
cttcttcttcttctccttctccttctcctcctcctcctcc
gaattcatgtggtgtgagagcaggagaggctctctggggaaaggaaagtg
ccagacagatggggcaggcagcagagcggcaaataggaacgaaatataag
ctggatatgacagcacatgcctctgatcccagcactctggacatgggagc
aggaggatcagaagttctaggtcatccgttgctacaagagttcatggcca
acctgagcgacatcatacctcaaaaccataaacgaaagaatgtaacataa
tgatgtgcacatatcacaatgtcacggcgaaagccatttcttgcctgcta
tcttagaaaaagtcaatatgataggggctggagagatggctcatcaggta
aagcatttgtctcttaagcttgatgactggagtttgaacccccaggacct
gtgtatatgctaggttgacatgatgtcctgccgtaatttttgcctcagca
ggaagacagaaatgagattcccagagtaagcctgttagcaaggaccccac
ctccactccaaatacttggctggacaatggcaggcaggttgggactgcgc
ccttggagagcagcaggtgctggtggctctgagtggctgtcacagcatct
tgtgacagccacatgagttcacaccatgaggcagcctcttttaccctggt
tgctctatcctggtggcccaaggtcaaagtcttggtctgggtctgtgcac
tgtgcctccttgccatgtccctgaccgcactgatggagcatgcgaggaag
cagcagatgtctctcctccgctcgacattgaggcggcagcactcagagtc
tcctggggcctcggacaaatgactgtttacagggacgggataatggtgat
atacgcaggacctgccagttggttaggcccgtggctttaatggctatctt
ggaagtgaccatttccattaggggtgattgaacttaatttaaatggccag
gatgacttatgtttcatcttccctcccaggctcccaaggtcagtcagaaa
actattttttttttaaaaccccaggaacctatgctcaaaatctttacaat
gtgccggttggtttatgctaaacactgcagccataatgtgttaactgtca
aatggccttctttgctactaatgcatggccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_129132839_129133125
seq2: B6Ng01-298H12.b_55_344

seq1  TTTCAGCCATCTGCCACTTGGATCATCCTTGGATTCTTTTTTATCTCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCCATCTGCCACTTGGATCATCCTTGGATTCTTTTTTATCTCAGT  50

seq1  TTGAATGTTTCTGTTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGTTTCTGTTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  100

seq1  TCTTTCTTTCTTTCTCTCTCTCTCTCTCTTTTTCTCTTTCTCTCTTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTCTCTCTCTCTCTCTTTTTCTCTTTCTCTCTTTCTT  150

seq1  TCTCTCTCTTTCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCG---TCTTC  197
      |||||||||||||||||||||||| |||||||||||||||||   |||||
seq2  TCTCTCTCTTTCTCCTCCTCCTCCACCTCCTCCTCTTCTTCGTCTTCTTC  200

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  250

seq1  CTTCTTCTTCTTCTCCTTCTCCTTCTCCTCCTCCTCCTCC  287
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTCTTCTCCTTCTCCTTCTCCTCCTCCTCCTCC  290

seq1: chr8_129296450_129297582
seq2: B6Ng01-298H12.g_67_1198 (reverse)

seq1  TAGGCCATGGCATAAGTAGGCAAAGAAGCCCATTTGTACAG-TAACACAT  49
      |||||||| |||| |||| ||||||||| ||||||| |||| ||||||||
seq2  TAGGCCAT-GCATTAGTA-GCAAAGAAGGCCATTTG-ACAGTTAACACAT  47

seq1  TAT-GCTTCAGTGTTTTAGCATTAACCCAAAACGGGCACATTGTAAAGAT  98
      ||| ||| ||||| |||||||| ||||   ||| ||||||||||||||||
seq2  TATGGCTGCAGTG-TTTAGCATAAACC---AACCGGCACATTGTAAAGAT  93

seq1  TTTGAGGCATA-GTTCCT-GGGTTTAAAAAAAAAAATAGTTTTCTGACTG  146
      ||||| ||||| |||||| |||||| ||||||||||||||||||||||||
seq2  TTTGA-GCATAGGTTCCTGGGGTTTTAAAAAAAAAATAGTTTTCTGACTG  142

seq1  ACCTT-GGAGCCTGGGAGGGAAGATGAAACATTAAGTCATCCT-GCCATT  194
      ||||| ||||||||||||||||||||||||| ||||||||||| ||||||
seq2  ACCTTGGGAGCCTGGGAGGGAAGATGAAACA-TAAGTCATCCTGGCCATT  191

seq1  AAAATTAAGTTCAATCACCCCTAATGGAA--TGTCACCTCCAAGATAGCC  242
       ||||||||||||||||||||||||||||   ||||| ||||||||||||
seq2  TAAATTAAGTTCAATCACCCCTAATGGAAATGGTCACTTCCAAGATAGCC  241

seq1  ATTAAAGCCACCGGCCTAACCAACTGGCAGGTCCTGCGTATATCACCATT  292
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGCCACGGGCCTAACCAACTGGCAGGTCCTGCGTATATCACCATT  291

seq1  ATCCCGTCCCTGT-AACAGTCATTTGTCCGAGGCCCCAGGAGACTCTGAG  341
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATCCCGTCCCTGTAAACAGTCATTTGTCCGAGGCCCCAGGAGACTCTGAG  341

seq1  TGCTGCCGCCGTCAATGTCGAGCGGAGGAGAGACATCTGCTGCTTCCTCG  391
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCGCC-TCAATGTCGAGCGGAGGAGAGACATCTGCTGCTTCCTCG  390

seq1  CATGCTCCATCAGTGCGGTCAGGGACATGGCAAGGAGGCACAGTGCACAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCCATCAGTGCGGTCAGGGACATGGCAAGGAGGCACAGTGCACAG  440

seq1  ACCCAGACCAAGACTTTGACCTTGGGCCACCAGGATAGAGCAACCAGGGT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGACCAAGACTTTGACCTTGGGCCACCAGGATAGAGCAACCAGGGT  490

seq1  AAAAGAGGCTGCCTCATGGTGTGAACTCATGTGGCTGTCACAAGATGCTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGGCTGCCTCATGGTGTGAACTCATGTGGCTGTCACAAGATGCTG  540

seq1  TGACAGCCACTCAGAGCCACCAGCACCTGCTGCTCTCCAAGGGCGCAGTC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCCACTCAGAGCCACCAGCACCTGCTGCTCTCCAAGGGCGCAGTC  590

seq1  CCAACCTGCCTGCCATTGTCCAGCCAAGTATTTGGAGTGGAGGTGGGGTC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTGCCTGCCATTGTCCAGCCAAGTATTTGGAGTGGAGGTGGGGTC  640

seq1  CTTGCTAACAGGCTTACTCTGGGAATCTCATTTCTGTCTTCCTGCTGAGG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTAACAGGCTTACTCTGGGAATCTCATTTCTGTCTTCCTGCTGAGG  690

seq1  CAAAAATTACGGCAGGACATCATGTCAACCTAGCATATACACAGGTCCTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATTACGGCAGGACATCATGTCAACCTAGCATATACACAGGTCCTG  740

seq1  GGGGTTCAAACTCCAGTCATCAAGCTTAAGAGACAAATGCTTTACCTGAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTCAAACTCCAGTCATCAAGCTTAAGAGACAAATGCTTTACCTGAT  790

seq1  GAGCCATCTCTCCAGCCCCTATCATATTGACTTTTTCTAAGATAGCAGGC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCTCTCCAGCCCCTATCATATTGACTTTTTCTAAGATAGCAGGC  840

seq1  AAGAAATGGCTTTCGCCGTGACATTGTGATATGTGCACATCATTATGTTA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGGCTTTCGCCGTGACATTGTGATATGTGCACATCATTATGTTA  890

seq1  CATTCTTTCGTTTATGGTTTTGAGGTATGATGTCGCTCAGGTTGGCCATG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTCGTTTATGGTTTTGAGGTATGATGTCGCTCAGGTTGGCCATG  940

seq1  AACTCTTGTAGCAACGGATGACCTAGAACTTCTGATCCTCCTGCTCCCAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTGTAGCAACGGATGACCTAGAACTTCTGATCCTCCTGCTCCCAT  990

seq1  GTCCAGAGTGCTGGGATCAGAGGCATGTGCTGTCATATCCAGCTTATATT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGAGTGCTGGGATCAGAGGCATGTGCTGTCATATCCAGCTTATATT  1040

seq1  TCGTTCCTATTTGCCGCTCTGCTGCCTGCCCCATCTGTCTGGCACTTTCC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCCTATTTGCCGCTCTGCTGCCTGCCCCATCTGTCTGGCACTTTCC  1090

seq1  TTTCCCCAGAGAGCCTCTCCTGCTCTCACACCACATGAATTC  1133
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCAGAGAGCCTCTCCTGCTCTCACACCACATGAATTC  1132