BAC Information

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BAC

Clone NameB6Ng01-301B22
Chromosome8 (Build37)
Map Location 37,855,058 - 38,034,105
singlet/doubletdoublet
Overlap geneA730069N07Rik
Upstream geneGm501, Cldn23, LOC671641, D8Ertd82e, Lonrf1, EG544878, 6430573F11Rik, Dlc1, LOC100042892
Downstream geneAI429214, LOC666877, LOC100041616, 1700016D18Rik, LOC641121, LOC621149, Sgcz
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301B22.bB6Ng01-301B22.g
ACCGA095515GA095516
length1,1741,132
definitionB6Ng01-301B22.b B6Ng01-301B22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,855,058 - 37,856,249)(38,032,970 - 38,034,105)
sequence
gaattctttaccctataggtctttcagtagagatggagggcactaatata
aatccataaaacgtatttcattatttgccaaagccaagaagtagattctg
ttgggagccgccctcacatttgccattataagatggcactgacagctgtg
ttctaagtggtaaacataatctgcacacgtgcaggggcagttttcccgcc
atgtgttctgcctttctcgtgatgacaactgggccgatgggctgcagcca
atcagggagtaatacgtcctaggcggagaataattctccttaaaaaggga
cggggtttcgccatttctctctcttgctcttgttctctctcttgctttct
tgttcttgttctttttctctctcttgctttcttgctcttgctctcttgct
ctcttgctctcttgctctctttctcttgctttcttgttcttgttcttttt
cttgctttcttgttctctttcttgctttcttgttcttgttctctctcttg
cactcttgctctcttgctctctggctcctggctcctggctcctgaagatg
taagcaataaagcttttgccgcagaagattccggtttgttgcgttcttcc
tggccggtcgcgagaacgcgggtaagagttggtgccgaaacgcgtgtaag
aagattctatatcaaactttctccttgtaatctatctgcagtcatacaat
gttgcttgtgtatgggacagcatggttttctgagagtgaagacagagtta
caatgatagaaattattgttttatgctagagagacgttagataggattac
gtgttttatagcctttgctaactgatttggatattttgtattgagaaaag
taaaaatactgaggaaagatttattttttcattcttaatgagaaagtaca
gttttctgcatggacagactgactgctcatgcttattatttaacccttac
ctcccagactgtagagagattaggtagtcagaaattctactggcccacag
acacatagcgttgtgtgtgccttagcagggctttggatatagagttgagt
tgaagcagtgctcatcaacgctgaacttacgtgcttgcatctgttcttgt
ctctaaccttatcaagtgagaacggcatgggtttctttcagttgtctatt
gactaacaggtcacgcctggggag
gaattcattaactaactggtcaggacttcttatcttttcttcgctgcctc
attactgaaatcagaaataactgacagcggacggaagacctagcaagcac
tctgatggtaataggaaacttattgacctaaatgccggcttttaagcaat
actctagagaaggacctatctggtgcttatctgatttaccagtttcaaaa
tttgaaccactgaatggactttctgcttaatatcatatatcaatcacctc
tccctaaatatacctgaatgagttcattgaacctgttttctcattgtttc
taggcagattcattaagcctatatttttattatgatcacaaaaacaatgc
tttatgagagagaaaatttttacatcaaattttaatgtatgaacggttta
aaacctgttttaagccacagcaagccattgcaatactttactaaggtacc
agagaaatgtttagtgaaaactatggaagtcacttgttgtttgaatgatc
cagtgactgaaccttggcctctaactggagatgcttttgaaggtttagga
ggtgtggccttgctagaggaagtaagttactcagggtgggctttgaggct
tcaaaactctcacaccattgcaatgattgttctctatgtcctgcttgtgg
atcaagatgtacgctctcttcttactgttgcagctgccatgcctgcctgc
tgctatggctatggttcccctccctggtggacaattatccttctgaaact
ataaaccccaataaactctcccttctttaagttgcttgaacttcaagttg
cagtggtttaatttagcaacacaaaagtatttaatacactgactgtggta
gattagagcaatccctttctagacattgttatgagtctaggccacatagt
tatttccatacttctaatactcatattgctcaacatcctttcttgtccac
catcatgatgattgttaaggaccttatatcagactgatacatcaaagatt
gtggcatcctcatatctatgtgatggctagggaatccaaaaggtctctgc
atgacctgttaacctctattatgcctattattggtgcactcaggactggt
gacttgatctacgctggtcaatatataccggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_37855058_37856249
seq2: B6Ng01-301B22.b_46_1219

seq1  GAATTCTTTACCCTATAGGTCTTTCAGTAGAGATGGAGGGCACTAATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACCCTATAGGTCTTTCAGTAGAGATGGAGGGCACTAATATA  50

seq1  AATCCATAAAACGTATTTCATTATTTGCCAAAGCCAAGAAGTAGATTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATAAAACGTATTTCATTATTTGCCAAAGCCAAGAAGTAGATTCTG  100

seq1  TTGGGAGCCGCCCTCACATTTGCCATTATAAGATGGCACTGACAGCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGCCGCCCTCACATTTGCCATTATAAGATGGCACTGACAGCTGTG  150

seq1  TTCTAAGTGGTAAACATAATCTGCACACGTGCAGGGGCAGTTTTCCCGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGTGGTAAACATAATCTGCACACGTGCAGGGGCAGTTTTCCCGCC  200

seq1  ATGTGTTCTGCCTTTCTCGTGATGACAACTGGGCCGATGGGCTGCAGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTCTGCCTTTCTCGTGATGACAACTGGGCCGATGGGCTGCAGCCA  250

seq1  ATCAGGGAGTAATACGTCCTAGGCGGAGAATAATTCTCCTTAAAAAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGAGTAATACGTCCTAGGCGGAGAATAATTCTCCTTAAAAAGGGA  300

seq1  CGGGGTTTCGCCATTTCTCTCTCTTGCTCTTGTTCTCTCTCTTGCTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGTTTCGCCATTTCTCTCTCTTGCTCTTGTTCTCTCTCTTGCTTTCT  350

seq1  TGTTCTTGTTCTTTTTCTCTCTCTTGCTTTCTTGCTCTTGCTCTCTTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTGTTCTTTTTCTCTCTCTTGCTTTCTTGCTCTTGCTCTCTTGCT  400

seq1  CTCTTGCTCTCTTGCTCTCTTTCTCTTGCTTTCTTGTTCTTGTTCTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCTCTCTTGCTCTCTTTCTCTTGCTTTCTTGTTCTTGTTCTTTTT  450

seq1  CTTGCTTTCTTGTTCTCTTTCTTGCTTTCTTGTTCTTGTTCTCTCTCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTTCTTGTTCTCTTTCTTGCTTTCTTGTTCTTGTTCTCTCTCTTG  500

seq1  CACTCTTGCTCTCTTGCTCTCTGGCTCCTGGCTCCTGGCTCCTGAAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTGCTCTCTTGCTCTCTGGCTCCTGGCTCCTGGCTCCTGAAGATG  550

seq1  TAAGCAATAAAGCTTTTGCCGCAGAAGATTCCGGTTTGTTGCGTTCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAATAAAGCTTTTGCCGCAGAAGATTCCGGTTTGTTGCGTTCTTCC  600

seq1  TGGCCGGTCGCGAGAACGCGGGTAAGAGTTGGTGCCGAAACGCGTGTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGGTCGCGAGAACGCGGGTAAGAGTTGGTGCCGAAACGCGTGTAAG  650

seq1  AAGATTCTATATCAAACTTTCTCCTTGTAATCTATCTGCAGTCATACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCTATATCAAACTTTCTCCTTGTAATCTATCTGCAGTCATACAAT  700

seq1  GTTGCTTGTGTATGGGACAGCATGGTTTTCTGAGAGTGAAGACAGAGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTGTGTATGGGACAGCATGGTTTTCTGAGAGTGAAGACAGAGTTA  750

seq1  CAATGATAGAAATTATTGTTTTATGCTAGAGAGACGTTAGATAGGATTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATAGAAATTATTGTTTTATGCTAGAGAGACGTTAGATAGGATTAC  800

seq1  GTGTTTTATAGCCTTTGCTAACTGATTTGGATATTTTGTATTGAGAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTATAGCCTTTGCTAACTGATTTGGATATTTTGTATTGAGAAAAG  850

seq1  TAAAAATACTGAGGAAAGATTTATTTTTTCATTCTTAATGAGAAAGTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATACTGAGGAAAGATTTATTTTTTCATTCTTAATGAGAAAGTACA  900

seq1  GTTTTCTGCATGGACAAGACTGACTGCTCATGCTTTATTATTTAACCCTT  950
      ||||||||||||||| ||||||||||||||||| ||||||||||||||||
seq2  GTTTTCTGCATGGAC-AGACTGACTGCTCATGC-TTATTATTTAACCCTT  948

seq1  ACCTCCCAAGACTGTAGAGAGATTAGGTAGTCAAGAAATTCTACTGGCCC  1000
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  ACCTCCC-AGACTGTAGAGAGATTAGGTAGTC-AGAAATTCTACTGGCCC  996

seq1  ACAGAACCACCATAGCGTTGTGTGTGCCTTAGCAAGGGCTTGGGATAATA  1050
      |||||  || ||||||||||||||||||||||| ||||||| |||| |||
seq2  ACAGA--CA-CATAGCGTTGTGTGTGCCTTAGC-AGGGCTTTGGAT-ATA  1041

seq1  GGAAGGTTGAGTTGAAGCAGTGGCTTCATCAACGCTGAAC-TACGTGCTT  1099
      |    |||||||||||||||||   ||||||||||||||| |||||||||
seq2  G---AGTTGAGTTGAAGCAGTG--CTCATCAACGCTGAACTTACGTGCTT  1086

seq1  TGCCATCTG-TCTTGTCTTCCTTACC-TATCAAGTGAGAACAGCAGTGGT  1147
         |||||| ||||||||  || ||| |||||||||||||| |||  |||
seq2  --GCATCTGTTCTTGTCT--CTAACCTTATCAAGTGAGAACGGCATGGGT  1132

seq1  TTCCTTCAAGGTTGTCATAGTGACTAACAGGCCACAGCTGGGGAG  1192
      ||| ||||  |||||| || ||||||||||| |||  ||||||||
seq2  TTCTTTCA--GTTGTC-TATTGACTAACAGGTCACGCCTGGGGAG  1174

seq1: chr8_38032970_38034105
seq2: B6Ng01-301B22.g_69_1200 (reverse)

seq1  ACCGGTATAT-TTGACAAGCTGTAGATTCAGGTCA-CAGTCTTGAGTGCA  48
      |||||||||| ||||| ||| ||||| ||| |||| ||||| ||||||||
seq2  ACCGGTATATATTGACCAGC-GTAGA-TCAAGTCACCAGTCCTGAGTGCA  48

seq1  CCAACCAATAGGCATTAATAGA-GTTTACAGGTCATTGCCAGAAGACTTT  97
      ||||  |||||||| ||||||| ||| |||||||||   ||| |||| ||
seq2  CCAA-TAATAGGCA-TAATAGAGGTTAACAGGTCAT--GCAG-AGACCTT  93

seq1  TTGGATT-CCTAGCCATCACATAGATATTGAGGATGCAACAATCTTTGAT  146
      ||||||| ||||||||||||||||||| ||||||||| ||||||||||||
seq2  TTGGATTCCCTAGCCATCACATAGATA-TGAGGATGCCACAATCTTTGAT  142

seq1  GTATCAGTTCTGATATAAGGTCCTT-ACAATCATCATGATGGTGGACAAG  195
      ||||||| ||||||||||||||||| ||||||||||||||||||||||||
seq2  GTATCAG-TCTGATATAAGGTCCTTAACAATCATCATGATGGTGGACAAG  191

seq1  AAAGGATGTTGAGCAATATGAGTATTAGAAGTATGGAAATAACTATGTGG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATGTTGAGCAATATGAGTATTAGAAGTATGGAAATAACTATGTGG  241

seq1  CCTAGACTCATAACAATGTCTAGAAAGGATTTGCTCTAATCTACCACAGT  295
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  CCTAGACTCATAACAATGTCTAGAAAGGGATTGCTCTAATCTACCACAGT  291

seq1  CAGTGTATTAAATACTTTTGTGTTGCTAAATTAAACCACTGCAACTTGAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTATTAAATACTTTTGTGTTGCTAAATTAAACCACTGCAACTTGAA  341

seq1  GTTCAAGCAACTTAAAGAAGGGAGAGTTTATTGGGGTTTATAGTTTCAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGCAACTTAAAGAAGGGAGAGTTTATTGGGGTTTATAGTTTCAGA  391

seq1  AGGATAATTGTCCACCAGGGAGGGGAACCATAGCCATAGCAGCAGGCAGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAATTGTCCACCAGGGAGGGGAACCATAGCCATAGCAGCAGGCAGG  441

seq1  CATGGCAGCTGCAACAGTAAGAAGAGAGCGTACATCTTGATCCACAAGCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCAGCTGCAACAGTAAGAAGAGAGCGTACATCTTGATCCACAAGCA  491

seq1  GGACATAGAGAACAATCATTGCAATGGTGTGAGAGTTTTGAAGCCTCAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATAGAGAACAATCATTGCAATGGTGTGAGAGTTTTGAAGCCTCAAA  541

seq1  GCCCACCCTGAGTAACTTACTTCCTCTAGCAAGGCCACACCTCCTAAACC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACCCTGAGTAACTTACTTCCTCTAGCAAGGCCACACCTCCTAAACC  591

seq1  TTCAAAAGCATCTCCAGTTAGAGGCCAAGGTTCAGTCACTGGATCATTCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAGCATCTCCAGTTAGAGGCCAAGGTTCAGTCACTGGATCATTCA  641

seq1  AACAACAAGTGACTTCCATAGTTTTCACTAAACATTTCTCTGGTACCTTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAAGTGACTTCCATAGTTTTCACTAAACATTTCTCTGGTACCTTA  691

seq1  GTAAAGTATTGCAATGGCTTGCTGTGGCTTAAAACAGGTTTTAAACCGTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTATTGCAATGGCTTGCTGTGGCTTAAAACAGGTTTTAAACCGTT  741

seq1  CATACATTAAAATTTGATGTAAAAATTTTCTCTCTCATAAAGCATTGTTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATTAAAATTTGATGTAAAAATTTTCTCTCTCATAAAGCATTGTTT  791

seq1  TTGTGATCATAATAAAAATATAGGCTTAATGAATCTGCCTAGAAACAATG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATCATAATAAAAATATAGGCTTAATGAATCTGCCTAGAAACAATG  841

seq1  AGAAAACAGGTTCAATGAACTCATTCAGGTATATTTAGGGAGAGGTGATT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAGGTTCAATGAACTCATTCAGGTATATTTAGGGAGAGGTGATT  891

seq1  GATATATGATATTAAGCAGAAAGTCCATTCAGTGGTTCAAATTTTGAAAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATGATATTAAGCAGAAAGTCCATTCAGTGGTTCAAATTTTGAAAC  941

seq1  TGGTAAATCAGATAAGCACCAGATAGGTCCTTCTCTAGAGTATTGCTTAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAATCAGATAAGCACCAGATAGGTCCTTCTCTAGAGTATTGCTTAA  991

seq1  AAGCCGGCATTTAGGTCAATAAGTTTCCTATTACCATCAGAGTGCTTGCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCGGCATTTAGGTCAATAAGTTTCCTATTACCATCAGAGTGCTTGCT  1041

seq1  AGGTCTTCCGTCCGCTGTCAGTTATTTCTGATTTCAGTAATGAGGCAGCG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTCCGTCCGCTGTCAGTTATTTCTGATTTCAGTAATGAGGCAGCG  1091

seq1  AAGAAAAGATAAGAAGTCCTGACCAGTTAGTTAATGAATTC  1136
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGATAAGAAGTCCTGACCAGTTAGTTAATGAATTC  1132