BAC Information

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BAC

Clone NameB6Ng01-302E24
Chromosome8 (Build37)
Map Location 74,900,860 - 74,901,654
singlet/doubletsinglet
Overlap geneEps15l1
Upstream geneNr2f6, Ushbp1, 5430437P03Rik, Ankrd41, Abhd8, Mrpl34, 1500034J01Rik, Tmem16h, Gtpbp3, Plvap, LOC665928, Bst2, 1110012M11Rik, BC033932, Txnl6, Slc27a1, Pgls, Bcnp1, Glt25d1, Unc13a, Jak3, Insl3, B3gnt3, LOC100042289, Fcho1, EG665991, LOC665996, LOC385024, LOC675190, Zfp709, LOC670453, Zfp617, BC049349, Cyp4f18, LOC666033, Olfr372, Olfr373, Olfr374, Tpm4, Rab8a, Hsh2d, Cib3, 2510049I19Rik, Ap1m1, LOC384840, LOC100042405, Klf2
Downstream geneCalr3, LOC100042421, 1700030K09Rik, Cherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3, Large, LOC100039001
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302E24.b
ACCGA096393
length1,123
definitionB6Ng01-302E24.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttgcgtgctcgagatgcaccatggaatgcttcaggtgctctga
gatgcatttcgcaatataaccagagctccactccagggcgtgttcatgat
gaatgttggccccttgccatagaccttccagcttctacaggatatgatgt
tcaaacgcaagatgatatcaagtatttcactggcaaaactatatacatat
atgtggcatatagcatgtttcaaaatatgcgtatgtgtggagtggctgaa
cttagccaattaacatacaccctgttttttatacttagttgttgtttctt
tgtgtgtgtggctgtgatggaactccagagatccctgttgcagggattaa
aggtgtctatcaggttcccctgtagcttttatcacatcctgggctgcatc
ttagcagttggtgacagtttacaggtggtggtcatttctgtcactaccag
aacattttgtacatggttatttttgtccatcgtttaaccagttggagttt
gagtggtaaactgtcatttgtacagtgtaaccataagatatattacctag
aaacttaagacttgtgtccaaaggaacccacatcttgtatttttaaaaaa
atgggggggggcagttgtttccatttcttaataaacagtttgaagcgagg
tctttgttcagtgttccatctggggctgtggagcaaagaatgctccgtcc
gttctctttcatggtgtgcagctaggaactgtgctttaccagaattgtgc
agccaaagtggcacctctggaacttactacaggtgactcttgagccactg
agctaaatgttaagttcccaaggtacaactgcccaagttcccaaggtaca
actgcccaagaggcaataggattcttataggccatggtcacttccgtggt
atatccttaattacttttttctttttacagtgctgtagggggaccttgag
ggctcacacatgttagctaggactcacactgaacttttgctcccagccca
aaatcatgtttatttcttgtgaactgatagaagcctcttcccacccatga
aagcctacacatgcataaatagaaaagccgtggccacattctcccagctt
tattcactctgacactttaccag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_74900860_74901654
seq2: B6Ng01-302E24.b_350_1163 (reverse)

seq1  CTGGTAA---GTCAGAGTGA--TAAGCTGGGATGGTG----CACGGCTT-  40
      |||||||   ||||||||||   |||||||||   ||    |||||||| 
seq2  CTGGTAAAGTGTCAGAGTGAATAAAGCTGGGAGAATGTGGCCACGGCTTT  50

seq1  --TCTCTCTGC-TGTGTAGGC-TTCCTGGGTAGGAAGAGGCTTCTATCAG  86
        | | | ||| ||||||||| ||| ||||| ||||||||||||||||||
seq2  TCTATTTATGCATGTGTAGGCTTTCATGGGTGGGAAGAGGCTTCTATCAG  100

seq1  -TCACAAGAAATAAACATGATTTTGGGCTGGGAGC-AAAGGTCAGTGGTG  134
       |||||||||||||||||||||||||||||||||| |||| ||||| |||
seq2  TTCACAAGAAATAAACATGATTTTGGGCTGGGAGCAAAAGTTCAGT-GTG  149

seq1  AGTCCTAGCTAACATGTGTGAGGCCTCAGGTTCCCCCTACAGCACTGT-A  183
      |||||||||||||||||||||| ||||| | ||||||||||||||||| |
seq2  AGTCCTAGCTAACATGTGTGAGCCCTCAAGGTCCCCCTACAGCACTGTAA  199

seq1  AAAGAAAAAAGTAATTAAGGATATA-CACGGAAGTGAACATGGCCTATAA  232
      ||||||||||||||||||||||||| ||||||||||| ||||||||||||
seq2  AAAGAAAAAAGTAATTAAGGATATACCACGGAAGTGACCATGGCCTATAA  249

seq1  GAATCCTATTGCCTCTTGGGCAGTTGTACCTTGGGAACTTGGGCAGTTGT  282
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTATTGCCTCTTGGGCAGTTGTACCTTGGGAACTTGGGCAGTTGT  299

seq1  ACCTTGGGAACTTAACATTTAGCTCAGTGGCTCAAGAGTCACCTGTAGTA  332
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGGAACTTAACATTTAGCTCAGTGGCTCAAGAGTCACCTGTAGTA  349

seq1  AGTTCCAGAGGTGCCACTTTGGCTGCACAATTCTGGT-AAGCACAGTTCC  381
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGTTCCAGAGGTGCCACTTTGGCTGCACAATTCTGGTAAAGCACAGTTCC  399

seq1  TAGCTGCACACCATG-AAGAGAACGGACGGAGCATTCTTTGCTCCACAGC  430
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAGCTGCACACCATGAAAGAGAACGGACGGAGCATTCTTTGCTCCACAGC  449

seq1  CCCAGATGGAACACTGAACAAAGACCTCGCTTCAAACTGTTTATTAAGAA  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGATGGAACACTGAACAAAGACCTCGCTTCAAACTGTTTATTAAGAA  499

seq1  ATGGAAACAACTGCCCCCCCCCATTTTTTTAAAAATACAAGATGTGGGTT  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAACAACTGCCCCCCCCCATTTTTTTAAAAATACAAGATGTGGGTT  549

seq1  CCTTTGGACACAAGTCTTAAGTTTCTAGGTAATATATCTTATGGTTACAC  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGACACAAGTCTTAAGTTTCTAGGTAATATATCTTATGGTTACAC  599

seq1  TGTACAAATGACAGTTTACCACTCAAACTCCAACTGGTTAAACGATGGAC  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAATGACAGTTTACCACTCAAACTCCAACTGGTTAAACGATGGAC  649

seq1  AAAAATAACCATGTACAAAATGTTCTGGTAGTGACAGAAATGACCACCAC  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAACCATGTACAAAATGTTCTGGTAGTGACAGAAATGACCACCAC  699

seq1  CTGTAAACTGTCACCAACTGCTAAGATGCAGCCCAGGATGTGATAAAAGC  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAACTGTCACCAACTGCTAAGATGCAGCCCAGGATGTGATAAAAGC  749

seq1  TACAGGGGAACCTGATAGACACCTTTAATCCCTGCAACAGGGATCTCTGG  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGGAACCTGATAGACACCTTTAATCCCTGCAACAGGGATCTCTGG  799

seq1  AGTTCCATCACAGCC  795
      |||||||||||||||
seq2  AGTTCCATCACAGCC  814