BAC Information

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BAC

Clone NameB6Ng01-305K02
Chromosome8 (Build37)
Map Location 59,326,494 - 59,480,810
singlet/doubletdoublet
Overlap geneLOC654355
Upstream geneAdam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
Downstream geneLOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305K02.bB6Ng01-305K02.g
ACCGA098874GA098875
length1,1941,073
definitionB6Ng01-305K02.b B6Ng01-305K02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,479,601 - 59,480,810)(59,326,494 - 59,327,557)
sequence
gaattcttttaaacctaaatctttcataaagccaaagagagatacatatg
tgaaaatgagtgagcagttcttaatctataaagtttctttgttttgagta
tccatctaattaatggcagcatgtagagttaaatgaatattaaaatctgg
tgttgtgggtgccttgccagtactgtctttttgttttcaatatgggatct
tttaaagtccagggtgccctcaagctcctgatcctctggactttacatgt
ccaatgctgagattatagttgtgctatatcacacctgggtaagatttttt
tctccttccctaactgttttctttcctccaccctcctctttcttcttcca
gggattgaacccagaaacattaaacacttactggatgctagcccagtttt
ctatcttctcagcctccactacatttagctttacactaggagtactcgga
cagttgattgtacaaatttatcttaggtttgatggagtcttacacttccc
attgtttaaccatgtaaagctactagagttgtagattagaaaggcatggt
gggccaactattttagagtgctctgccccatacttgcatgctcacagaca
agtactttcatttctttgaggcttaatttccttatttataacattgagaa
aataagtgtacctctcagaatcatccaaagaattgcatataatggtggac
acacaataatttgcacagtgtttagctatggtccttcgatcaacacagac
actgttgccattcatgccacccatgtagtcccagcagtgacacagaggtt
tcagaaacagcagcagcacagacatttcacttactgagagtccacgttag
ggaacaagcccgatatcagaagccgcagactttccctcagcacaaggtac
gtgcacttctagaactttcaattaagggtctggctgagttaacatttgca
gacttagacacatatttttctacttccaactgtcactctgatgcagacac
ctattcatcattctttcactgaggttaagaggagttcaaaaaaaaaaacc
agaaacaaaaccaaaaaaaaactggaaagaagcagtcttacctgagaatt
tattttagttttctttttgatccgtcctaatcttcaaattttgtcattca
cgatccatccagaatgtaattatacacactggtcccttacagtc
gaattcttatttcaaatattagaattttaattcaaaataattcttcaata
gtcatgttcccagagttgtctttttaaaataaaagcacaagaataagtat
tcattttatttttctatgaaataaaaagccatggaaacaactaaggcaca
ttttattgaaattttcttatttctgtatcattattgcaacagtaatagca
taatttcaatattctatttctcacaattagtcatagctcaactttataag
atgggtgtacatttaattataatgtgtttgctattgacaaagttcaagtt
acagacctatcattcttgaggcacttatgcagtcttgattatattaggac
attgtatttgggcttataaccataagcctggcttttgggtgaccattcga
ggtggatatctacctgtaatggcaaccatgtgacctattcattattatta
gtagtgtgtttgtatgcatcttccttgatgcaggttccagggctcaaact
cctcaggtctttagtgttttgcagcaagtaatttacttactatgcaatcc
catcagacatctctgtattcttgagtgatttcatataattgcttatagca
aattttcagactggatccatttcatgtttagtatacgtggtttggctctt
attcccttattttcagatcctcattccttgataactacaagtcatttctt
aagtccccaagagtcacagtttctttgatgttttgctgagaacagacaca
tggtatttttctagaagctatctggtgaaagggaatgtgatgttttgctg
gaatgagaacttgagaggacacgtaatatttggaacatgtataagtatat
cccaacagacagtggatgatgctctagcattggtcaccttgttgtctctg
ttgggtttcacctgaatcctggtcttcaactgatgatgcttttgtaatga
ttcaccattctttctttcttctgaatttttgcttgtagtgacttttgttg
aagaagaaacataccaaagaagtctggtaataattccggctgcttcttgc
tagcttcagcagactcagggata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59479601_59480810
seq2: B6Ng01-305K02.b_46_1239 (reverse)

seq1  GACTGGAAAGGGACCAGTGTGTATTAATCTACATTCTTGAAATGAATCTG  50
      |||| | |||||||||||||||| |||| |||||||| |  ||| ||| |
seq2  GACT-GTAAGGGACCAGTGTGTA-TAAT-TACATTCTGG--ATGGATC-G  44

seq1  TAAAATGACAAAAATATGAAGATAAGAACGAATTAAAAAAAGAAAACTAA  100
      |  |||||| ||||| ||||||| || ||| ||   |||||||||||| |
seq2  T-GAATGAC-AAAATTTGAAGATTAGGACGGAT--CAAAAAGAAAACT-A  89

seq1  AAATAAATTTCTCAGGT-AGACTGCTTCTTTTCAGTTTTTTTTTTTTGTT  149
      ||||||| ||||||||| ||||||||||||| ||||||||||||      
seq2  AAATAAA-TTCTCAGGTAAGACTGCTTCTTTCCAGTTTTTTTTT----GG  134

seq1  TTTTGTTTCTTGTTTTTTTTTTTTTGAACCTCTCTTAAACCTCAGTGAAA  199
      |||||||||| |  |||||||||||||||  ||||| |||||||||||||
seq2  TTTTGTTTCTGG--TTTTTTTTTTTGAACTCCTCTT-AACCTCAGTGAAA  181

seq1  G-ATGATGAATAGGTGTCTGCATCAGAGTGACAGTTGGAAGTAGAAAAAT  248
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATGAATAGGTGTCTGCATCAGAGTGACAGTTGGAAGTAGAAAAAT  231

seq1  ATGTGTCTAAGTCTGCAAATGTTAACTCAGCCAGACCCTTAATTGAAAGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTAAGTCTGCAAATGTTAACTCAGCCAGACCCTTAATTGAAAGT  281

seq1  TCTAGAAGTGCACGTACCTTGTGCTGAGGGAAAGTCTGCGGCTTCTGATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAGTGCACGTACCTTGTGCTGAGGGAAAGTCTGCGGCTTCTGATA  331

seq1  TC-GGCTTGTTCCCTAACGTGGACTCTCAGTAAGTGAAATGTCTGTGCTG  397
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGCTTGTTCCCTAACGTGGACTCTCAGTAAGTGAAATGTCTGTGCTG  381

seq1  CTGCTGTTTCTGAAACCTCTGTGTCACTGCTGGGACTACATGGGTGGCAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTTTCTGAAACCTCTGTGTCACTGCTGGGACTACATGGGTGGCAT  431

seq1  GAATGGCAACAGTGTCTGTGTTGATCGAAGGACCATAGCTAAACACTGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCAACAGTGTCTGTGTTGATCGAAGGACCATAGCTAAACACTGTG  481

seq1  CAAATTATTGTGTGTCCACCATTATATGCAATTCTTTGGATGATTCTGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATTGTGTGTCCACCATTATATGCAATTCTTTGGATGATTCTGAG  531

seq1  AGGTACACTTATTTTCTCAATGTTATAAATAAGGAAATTAAGCCTCAAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACACTTATTTTCTCAATGTTATAAATAAGGAAATTAAGCCTCAAAG  581

seq1  AAATGAAAGTACTTGTCTGTGAGCATGCAAGTATGGGGCAGAGCACTCTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAAGTACTTGTCTGTGAGCATGCAAGTATGGGGCAGAGCACTCTA  631

seq1  AAATAGTTGGCCCACCATGCCTTTCTAATCTACAACTCTAGTAGCTTTAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTTGGCCCACCATGCCTTTCTAATCTACAACTCTAGTAGCTTTAC  681

seq1  ATGGTTAAACAATGGGAAGTGTAAGACTCCATCAAACCTAAGATAAATTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAAACAATGGGAAGTGTAAGACTCCATCAAACCTAAGATAAATTT  731

seq1  GTACAATCAACTGTCCGAGTACTCCTAGTGTAAAGCTAAATGTAGTGGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAATCAACTGTCCGAGTACTCCTAGTGTAAAGCTAAATGTAGTGGAG  781

seq1  GCTGAGAAGATAGAAAACTGGGCTAGCATCCAGTAAGTGTTTAATGTTTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAAGATAGAAAACTGGGCTAGCATCCAGTAAGTGTTTAATGTTTC  831

seq1  TGGGTTCAATCCCTGGAAGAAGAAAGAGGAGGGTGGAGGAAAGAAAACAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCAATCCCTGGAAGAAGAAAGAGGAGGGTGGAGGAAAGAAAACAG  881

seq1  TTAGGGAAGGAGAAAAAAATCTTACCCAGGTGTGATATAGCACAACTATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAAGGAGAAAAAAATCTTACCCAGGTGTGATATAGCACAACTATA  931

seq1  ATCTCAGCATTGGACATGTAAAGTCCAGAGGATCAGGAGCTTGAGGGCAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGCATTGGACATGTAAAGTCCAGAGGATCAGGAGCTTGAGGGCAC  981

seq1  CCTGGACTTTAAAAGATCCCATATTGAAAACAAAAAGACAGTACTGGCAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACTTTAAAAGATCCCATATTGAAAACAAAAAGACAGTACTGGCAA  1031

seq1  GGCACCCACAACACCAGATTTTAATATTCATTTAACTCTACATGCTGCCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCACAACACCAGATTTTAATATTCATTTAACTCTACATGCTGCCA  1081

seq1  TTAATTAGATGGATACTCAAAACAAAGAAACTTTATAGATTAAGAACTGC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAGATGGATACTCAAAACAAAGAAACTTTATAGATTAAGAACTGC  1131

seq1  TCACTCATTTTCACATATGTATCTCTCTTTGGCTTTATGAAAGATTTAGG  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCATTTTCACATATGTATCTCTCTTTGGCTTTATGAAAGATTTAGG  1181

seq1  TTTAAAAGAATTC  1210
      |||||||||||||
seq2  TTTAAAAGAATTC  1194

seq1: chr8_59326494_59327557
seq2: B6Ng01-305K02.g_68_1140

seq1  GAATTCTTATTTCAAATATTAGAATTTTAATTCAAAATAATTCTTCAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTTCAAATATTAGAATTTTAATTCAAAATAATTCTTCAATA  50

seq1  GTCATGTTCCCAGAGTTGTCTTTTTAAAATAAAAGCACAAGAATAAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTTCCCAGAGTTGTCTTTTTAAAATAAAAGCACAAGAATAAGTAT  100

seq1  TCATTTTATTTTTCTATGAAATAAAAAGCCATGGAAACAACTAAGGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTATTTTTCTATGAAATAAAAAGCCATGGAAACAACTAAGGCACA  150

seq1  TTTTATTGAAATTTTCTTATTTCTGTATCATTATTGCAACAGTAATAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGAAATTTTCTTATTTCTGTATCATTATTGCAACAGTAATAGCA  200

seq1  TAATTTCAATATTCTATTTCTCACAATTAGTCATAGCTCAACTTTATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCAATATTCTATTTCTCACAATTAGTCATAGCTCAACTTTATAAG  250

seq1  ATGGGTGTACATTTAATTATAATGTGTTTGCTATTGACAAAGTTCAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGTACATTTAATTATAATGTGTTTGCTATTGACAAAGTTCAAGTT  300

seq1  ACAGACCTATCATTCTTGAGGCACTTATGCAGTCTTGATTATATTAGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCTATCATTCTTGAGGCACTTATGCAGTCTTGATTATATTAGGAC  350

seq1  ATTGTATTTGGGCTTATAACCATAAGCCTGGCTTTTGGGTGACCATTCGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATTTGGGCTTATAACCATAAGCCTGGCTTTTGGGTGACCATTCGA  400

seq1  GGTGGATATCTACCTGTAATGGCAACCATGTGACCTATTCATTATTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATATCTACCTGTAATGGCAACCATGTGACCTATTCATTATTATTA  450

seq1  GTAGTGTGTTTGTATGCATCTTCCTTGATGCAGGTTCCAGGGCTCAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGTGTTTGTATGCATCTTCCTTGATGCAGGTTCCAGGGCTCAAACT  500

seq1  CCTCAGGTCTTTAGTGTTTTGCAGCAAGTAATTTACTTACTATGCAATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGTCTTTAGTGTTTTGCAGCAAGTAATTTACTTACTATGCAATCC  550

seq1  CATCAGACATCTCTGTATTCTTGAGTGATTTCATATAATTGCTTATAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGACATCTCTGTATTCTTGAGTGATTTCATATAATTGCTTATAGCA  600

seq1  AATTTTCAGACTGGATCCATTTCATGTTTAGTATACGTGGTTTGGCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCAGACTGGATCCATTTCATGTTTAGTATACGTGGTTTGGCTCTT  650

seq1  ATTCCCTTATTTTCAGATCCTCATTCCTTGATAACTACAAGTCATTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTTATTTTCAGATCCTCATTCCTTGATAACTACAAGTCATTTCTT  700

seq1  AAGTCCCCAAGAGTCACAGTTTCTTTGATGTTTTGCTGAGAACAGACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCCAAGAGTCACAGTTTCTTTGATGTTTTGCTGAGAACAGACACA  750

seq1  TGGTATTTTTCTAGAAGCTATCTGGTGAAAGGGAATGTGATGTTTTGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTTTTCTAGAAGCTATCTGGTGAAAGGGAATGTGATGTTTTGCTG  800

seq1  GAATGAGAACTTGAGAGGACACGTAATATTTGGAACATGTATAAGTATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGAACTTGAGAGGACACGTAATATTTGGAACATGTATAAGTATAT  850

seq1  CCCAACAGACAGTGGATGATGCTCTAGCATTGGTCACCTTGTTGGTCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCCAACAGACAGTGGATGATGCTCTAGCATTGGTCACCTTGTT-GTCTCT  899

seq1  GTTGGGTTTCA-CTG-ATCCTGGTCTTC-ACTGATGATGCTTTTGTAATG  947
      ||||||||||| ||| |||||||||||| |||||||||||||||||||||
seq2  GTTGGGTTTCACCTGAATCCTGGTCTTCAACTGATGATGCTTTTGTAATG  949

seq1  ATTCACCATTCTTTCTT--CTCTG-ATTTTTGCTTGTAGTGAC-TTTGTT  993
      |||||||||||||||||   |||| |||||||||||||||||| ||||||
seq2  ATTCACCATTCTTTCTTTCTTCTGAATTTTTGCTTGTAGTGACTTTTGTT  999

seq1  GA--GAGAAACATACCAAAGAAGTTCTGGTAAT-ATTCCGGCTGCTTCTT  1040
      ||   |||||||||||||||||| ||||||||| ||||||||||||||||
seq2  GAAGAAGAAACATACCAAAGAAG-TCTGGTAATAATTCCGGCTGCTTCTT  1048

seq1  GCT-GCTTCAGCAGACTCAGGGATA  1064
      ||| |||||||||||||||||||||
seq2  GCTAGCTTCAGCAGACTCAGGGATA  1073