BAC Information

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BAC

Clone NameB6Ng01-307D17
Chromosome8 (Build37)
Map Location 51,946,121 - 51,947,073
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039919, EG667495, LOC100039954, LOC100039966
Downstream geneLOC667517
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307D17.bB6Ng01-307D17.g
ACCGA100056GA100057
length1,2151,090
definitionB6Ng01-307D17.b B6Ng01-307D17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctcttggccctcagagcttcactcctgtttccccaactgct
cccaatgcctgatcatgttccttttttaccctcacctcccctctaccacc
caggtccctccctttctctgcccctagaattggttttttttctctctccc
aagtgagatggaagcatcgttacttgttccctttggcttgttaacctttt
tgagttgtgtgggttttatcctggatattctgtactattttggctaatat
ccacttattagtgagtatatagcatgcatgtcctttggattctgagttct
ctcccacaggatgatattttctagttccacccatttgcttacaaaaacat
gatgtccacattcttaatagctgattagtattccactatgtaaatgaatc
acaacatctgtatccattcttccattgtggggcatctggattgtttccag
atcctggatatagcaaatctcaacctagtggagcacatgcccctgtagca
tggtgtagctgagtctttaggtagatctatttccaattttctgaaaaatg
tgcagatttatatacagagtggttgtaccagtttgcaatcccaccagcaa
tggaggagtgttcctcttcatccgcattctcaccaacatatgctatcacc
agagtttttgatcctcatggatgccttatttaacagagcttaatgtcctc
aatatttatccacattgtcaatgtttagtatatgatccctgcatctattc
acctgccatcttaggagctaggggatttaaacactcttaatactgtgaat
gaaagtgtcaggaatctaaaattctcatttcacttggctttgatacaaat
ccagaagttgaatttctaggtcacagaacaattgtacttaatttatctta
ttttccaggactgttttccatgttggctacatgattgactgcacactgat
gggaagatctagggacctgtgagggatctcgggtttggtgatacaatgta
ataactaaagatcatagtacagcacccgagatttacactgtgttataaag
aacattacccctgtcacaagtttaattgtatttacatattgggcacatta
acactggcactatcactaagagaccctggtgcacagtttatatagtaatt
gcacggttcatgaaccacagagtgtaaggagtgtccatctcattgggata
tgagaaagacgccat
gaattctcacctgaggaacaccgaatggcagagaagcacctgaaaaactg
ttcaacatctttaatcatcagggaaatgcaactcaaaacaaccctgagat
tccacctcacaccagtcagaataactaagatcaaaaattcaggtgacaga
agatgctggcgaggatgtggagaaagaggaacactccttcattgttgtgg
gattgcaagcttgtacaaccactctggaaatcagattggtggttcctcag
aaaattggacatagtagtaccagaggatccagcaataactctcctgggca
tatatccagaagatgttctaaccggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtcctactgagctattaaaaggaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccaaaactt
aggatacccaagatataagatataatttgttaaacgcatgaaactcgaga
tggagttcttaagaaaacaatcctctaaaagattttagtatttaaaaaaa
tgtttggggggggggctgctgagactatgtaaaaaatgttacccaccaag
atcaacctggtttctgtagatttcccctgaacaattctttcatttcttca
atagaaggctgacatgatgtctactccctaaggaagtattcatgcagtcg
tcttaatgatcttaaatgcacacaaagaataggctgataatttattcttc
tctgagatcagctttgcctggaggtgtgtgatgttgcttaattagtgcaa
cttttttaagaagcattttttctactcttccaatatagtcttttttttaa
tgggtttaaaatttgaaggtcttatattaataacacagcatgtctatggc
acacgaatgcatctcactcacttactgccttttgagtact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_51946121_51947073
seq2: B6Ng01-307D17.g_216_1153

seq1  ATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTTCATTGTTGTGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTTCATTGTTGTGGGA  50

seq1  TTGCAAGCTTGTACAACCACTCTGGAAATCAGATTGGTGGTTCCTCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGCTTGTACAACCACTCTGGAAATCAGATTGGTGGTTCCTCAGAA  100

seq1  AATTGGACATAGTAGTACCAGAGGATCCAGCAATAACTCTCCTGGGCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGACATAGTAGTACCAGAGGATCCAGCAATAACTCTCCTGGGCATA  150

seq1  TATCCAGAAGATGTTCTAACCGGTAAGAAGGACACATGCTCCACTATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGAAGATGTTCTAACCGGTAAGAAGGACACATGCTCCACTATGTT  200

seq1  CATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCC  250

seq1  CCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAG  300

seq1  TCCTACTGAGCTATTAAAAGGAATGAATTTATGAAATTCCTAGGCAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTGAGCTATTAAAAGGAATGAATTTATGAAATTCCTAGGCAAATG  350

seq1  GATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAAGGA  400

seq1  ACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAACTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAACTTAG  450

seq1  GATACCCAAGATATAAGATATAATTTGTTAAACGCATGAAACTCGAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCCAAGATATAAGATATAATTTGTTAAACGCATGAAACTCGAGATG  500

seq1  GAGTTCTTAAGAAAACAATCCTCTAAAAGATTTTAGTATTTAAAAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTTAAGAAAACAATCCTCTAAAAGATTTTAGTATTTAAAAAAATG  550

seq1  TTTGGGGGGGGGGCTGCTGAGACTATGTAAAAAATGTTACCCACCAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGGGGGGGCTGCTGAGACTATGTAAAAAATGTTACCCACCAAGAT  600

seq1  CAACCTGGTTTCTGTAGATTTCCCCTGAACAATTCTTTCATTTCTTCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGGTTTCTGTAGATTTCCCCTGAACAATTCTTTCATTTCTTCAAT  650

seq1  AGAAGGCTGACATGATGTCTACTCCCTAAGGAAGTATTCATGCAGTCGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCTGACATGATGTCTACTCCCTAAGGAAGTATTCATGCAGTCGTC  700

seq1  TTAATGATCTTAAATGCACACAAAGAATAGGCTGATAATTTATTCTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGATCTTAAATGCACACAAAGAATAGGCTGATAATTTATTCTTCTC  750

seq1  TGAGATCAGCTTTTGCCTGGAGGGTGTGTGATGTTGCTTAATTTAGTGCA  800
      |||||||||| |||||||||| ||||||||||||||||||| ||||||||
seq2  TGAGATCAGC-TTTGCCTGGA-GGTGTGTGATGTTGCTTAA-TTAGTGCA  797

seq1  ACTTTTTAAAGAAGCA-TTTTTCTACTCTTCAATTATAAGGTCTTTTTTT  849
      ||||||| |||||||| |||||||||||||| | ||||  ||||||||||
seq2  ACTTTTTTAAGAAGCATTTTTTCTACTCTTCCAATATA--GTCTTTTTTT  845

seq1  TTAATTGGGTTTTAAAATTTTAAAGGTCTTTAATAATAAATTACCACAGC  899
      |  | |||||||  ||| ||| ||||||||  ||| |||  || ||||||
seq2  T--AATGGGTTT--AAAATTTGAAGGTCTT--ATATTAA--TAACACAGC  887

seq1  ATGTCTATTGCCAACCACAGATGCCATCTCACTCAC-TACTGCTTTTGAA  948
      |||||||| ||    |||  ||| |||||||||||| |||||| |||  |
seq2  ATGTCTATGGC---ACACGAATG-CATCTCACTCACTTACTGCCTTTTGA  933

seq1  GTACT  953
      |||||
seq2  GTACT  938