BAC Information

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BAC

Clone NameB6Ng01-309A03
Chromosome8 (Build37)
Map Location 130,410,672 - 130,411,723
singlet/doubletsinglet
Overlap genenone
Upstream geneTomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3, EG628847
Downstream geneNrp1, LOC668494, Itgb1, LOC100042659
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309A03.bB6Ng01-309A03.g
ACCGA101354GA101355
length1,054723
definitionB6Ng01-309A03.b B6Ng01-309A03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccaggtagattagactctccttgctgccaatctcttaggagct
aactgtctctgcttcctagctctaggattacagagacatagtgacacaca
tggctttttacctgaatgctggctaaccaactcaggtcctcctgctagca
actagtgtaacaactagtttaacaactgagccatctagccagctcagaca
aggcatttctaattggggattccaagcctccccagttagatttcttcctc
tttgcaggagctagccactgtctaggttactttgttgtttgtttgtttat
ttgtttgtttattggctttttcgagacagggtttctctgtatagccctgg
ctgtcctggaactcactttgtagaccaggctggcctcaaactcagaaatc
cacctgcctctgcctcccaagtgctaggattaaaggcgtgcgccaccact
gcctgtctgactttgcttatttttgggcatcaggaattataggaactaga
tgagaagctacacttgaagtcttccaaactcacactcctgtgagatcatt
tctcctcctttgacatcagcctctgaggttgatattctagttgctgagaa
tcctctgcatgtccttcttgctccaacacctcacatcaattttcatattt
aaaacctaactgaaactcttcctaactccatgttttcctggatgaattaa
actatacagagtcattcttaatacgacgggaaaatagaatccaagttgtc
tgtctaggtggagtgactcaatcagtaaagtactttctgtatgagcctga
ggatctaagcttttaccaccagaacccacataaaaatttgggcatgctgt
agcatgcgtatagtttcagtgatagggagacagagcctggacgatctccg
gggcttggctatcagctagtttaatttgattggtgggctccagacacata
agagaccctcttcccaaaataggtaggaagcaattgaagaagataccctg
actttaactctgggccttaaatataaattcacatattgtgcatgcacacc
tgta
gaattctagtcagagaactaactctctctctctctctctctctctctctc
tctctccctccctccccctccttccttccctccctctctctccctctcct
ccctctctctccttcctctccctccccctccccttccctcctcctcctct
ctcacccccatacactcatactgtgtgtctacataggtctgtcattctag
atcatcctctgatgttagcatatctgtgcttgtttaacaacacacctccc
tgtaaaacgacctcacagccccctgcggtgacttacttcgttggagttac
ttgcatgggggatctgtgtttgaaggatggacaatggaatatttatctta
cctacctcttgctataagactgtgtgggcgcctgcttgggggcgggaaat
aaaataaactttttatttagatggaatttttgtgtatgggtatttatttc
agtaaaggaaattcttcccttgcttgatatgccatagaactcacgctctc
taactgaggtttttttttggaatgaaatgtcgctccctaggataaaataa
taatcatttaactctcacccatccataatgcatgagtttcaggtctggaa
tacttatgccgacgaaagtaattgaggacagctctgactagggccctctt
cgggaacattccagataacactcagagagttggtattgatacaaattatg
ggcactggaggggttgttttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_130410672_130411723
seq2: B6Ng01-309A03.b_46_1099

seq1  GAATTCACCAGGTAGATTAGACTCTCCTTGCTGCCAATCTCTTAGGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAGGTAGATTAGACTCTCCTTGCTGCCAATCTCTTAGGAGCT  50

seq1  AACTGTCTCTGCTTCCTAGCTCTAGGATTACAGAGACATAGTGACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCTCTGCTTCCTAGCTCTAGGATTACAGAGACATAGTGACACACA  100

seq1  TGGCTTTTTACCTGAATGCTGGCTAACCAACTCAGGTCCTCCTGCTAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTTACCTGAATGCTGGCTAACCAACTCAGGTCCTCCTGCTAGCA  150

seq1  ACTAGTGTAACAACTAGTTTAACAACTGAGCCATCTAGCCAGCTCAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGTAACAACTAGTTTAACAACTGAGCCATCTAGCCAGCTCAGACA  200

seq1  AGGCATTTCTAATTGGGGATTCCAAGCCTCCCCAGTTAGATTTCTTCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTTCTAATTGGGGATTCCAAGCCTCCCCAGTTAGATTTCTTCCTC  250

seq1  TTTGCAGGAGCTAGCCACTGTCTAGGTTACTTTGTTGTTTGTTTGTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGGAGCTAGCCACTGTCTAGGTTACTTTGTTGTTTGTTTGTTTAT  300

seq1  TTGTTTGTTTATTGGCTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTATTGGCTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGG  350

seq1  CTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATC  400

seq1  CACCTGCCTCTGCCTCCCAAGTGCTAGGATTAAAGGCGTGCGCCACCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCCTCTGCCTCCCAAGTGCTAGGATTAAAGGCGTGCGCCACCACT  450

seq1  GCCTGTCTGACTTTGCTTATTTTTGGGCATCAGGAATTATAGGAACTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCTGACTTTGCTTATTTTTGGGCATCAGGAATTATAGGAACTAGA  500

seq1  TGAGAAGCTACACTTGAAGTCTTCCAAACTCACACTCCTGTGAGATCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGCTACACTTGAAGTCTTCCAAACTCACACTCCTGTGAGATCATT  550

seq1  TCTCCTCCTTTGACATCAGCCTCTGAGGTTGATATTCTAGTTGCTGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCTTTGACATCAGCCTCTGAGGTTGATATTCTAGTTGCTGAGAA  600

seq1  TCCTCTGCATGTCCTTCTTGCTCCAACACCTCACATCAATTTTCATATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCATGTCCTTCTTGCTCCAACACCTCACATCAATTTTCATATTT  650

seq1  AAAACCTAACTGAAACTCTTCCTAACTCCATGTTTTCCTGGATGAATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTAACTGAAACTCTTCCTAACTCCATGTTTTCCTGGATGAATTAA  700

seq1  ACTATACAGAGTCATTCTTAATACGACGGGAAAATAGAATCCAAGTTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACAGAGTCATTCTTAATACGACGGGAAAATAGAATCCAAGTTGTC  750

seq1  TGTCTAGGTGGAGTGACTCAATCAGTAAAGTACTTTCTGTATGAGCCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGGTGGAGTGACTCAATCAGTAAAGTACTTTCTGTATGAGCCTGA  800

seq1  GGATCTAAGCTTTTACCACCAGAACCCACATAAAAATTTGGGCATGCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTAAGCTTTTACCACCAGAACCCACATAAAAATTTGGGCATGCTGT  850

seq1  AGCATGCGTATAGTTTCAGTGATAGGGAGACAGAGCCTGGACGATCTCCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCGTATAGTTTCAGTGATAGGGAGACAGAGCCTGGACGATCTCCG  900

seq1  GGGCTTGGCTATCAGCTAGTTTAATTTGATTGGTGGGCTCCAGACACATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGGCTATCAGCTAGTTTAATTTGATTGGTGGGCTCCAGACACATA  950

seq1  AGAGACCCTC-TCCCAAAATAGGTAGGAAGCAATTGAAGAAGATA-CCTG  998
      |||||||||| |||||||||||||||||||||||||||||||||| ||||
seq2  AGAGACCCTCTTCCCAAAATAGGTAGGAAGCAATTGAAGAAGATACCCTG  1000

seq1  ACTTTAAACTCTGGCCTTTAAATATAAATTCACATA-TGTGCATGCACAC  1047
      ||||| |||||||| | ||||||||||||||||||| |||||||||||||
seq2  ACTTT-AACTCTGGGCCTTAAATATAAATTCACATATTGTGCATGCACAC  1049

seq1  CTGTA  1052
      |||||
seq2  CTGTA  1054