BAC Information

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BAC

Clone NameB6Ng01-309L24
Chromosome8 (Build37)
Map Location 94,092,374 - 94,093,109
singlet/doubletsinglet
Overlap geneAJ237917
Upstream geneLOC100041133, Chd9, LOC100041156, EG626231, Rbl2, Aktip, LOC667162, LOC100041222, Rpgrip1l
Downstream geneLOC100041254, LOC674324, LOC100040628, Irx3, 4933436C20Rik, Irx5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309L24.bB6Ng01-309L24.g
ACCGA101914GA101915
length7361,172
definitionB6Ng01-309L24.b B6Ng01-309L24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatagcatacacatacacaaggctcaacctcctctgctgtgccc
aaaaggcctctggaaaaaatgaatatttattttgttttgttttttcaaga
cagggtttctctgtgtagccctggatgtcctagaactcactctgtagacc
aggctggcctccagtccaaagattcacctgcctctgcttccccagagctg
ggactgaaggtgtgtaagaacactgcccaccatgagtatctattgtaata
agaagaaagaaaactgacaaggtgggaagctatattaattcactggaaat
tcaataaatggccccagaaggaaagagtcagtatttgcatctgctatgtc
tactttccatggggaaagatcacggtgactctcagcttaacactaaccca
tgagaagaaggtgagatgcccgaaactcggcaggccagagcttcttccac
ccggccttagcaaccttcactgctgcagaactgtgaaaaatggccccacc
tacccaaactttggtggtctcatctataagacaggcagaacagcctgcag
gtccaaaggaagactcaacgtatgctactgtctgctgtaggacacggtac
taaggatgccttagttaatttcttttgctgtgataaaatgccaagaccag
aaacaacctggggaggggagggtttgtctcatcttacccttccacataac
ggggcaggagcttaaggcaggcgcggggggtggggg
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgttggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgatttct
ttaatgtgttcttggattcagttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatattggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagatatttgtccatttcgtccagattttcca
gttttgttgagtataagcttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttgat
taggattttgtccctttgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttaatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
cttttagatgtgttgtcaggctgctagtatgtgctctctcccggtttctt
cttggaggtactcagagctatgagtttccctctagaaatgctttcattgt
gtccaagtttgggtacgttgtgcctcattttcattaacttctaaaaggtc
ttaagtttctttccttaattccctcttggacgcaggtatcattgagagag
tgttgttacggttccaggtatgttgctttccaattcttaacgtatggtta
tggagagatactgacgtcttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_94092374_94093109
seq2: B6Ng01-309L24.b_47_782 (reverse)

seq1  CCCCCACCCCCCGCGCCTGCCTTAAGCTCCTGCCCCGTTATGTGGAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCCCCGCGCCTGCCTTAAGCTCCTGCCCCGTTATGTGGAAGGG  50

seq1  TAAGATGAGACAAACCCTCCCCTCCCCAGGTTGTTTCTGGTCTTGGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGAGACAAACCCTCCCCTCCCCAGGTTGTTTCTGGTCTTGGCATT  100

seq1  TTATCACAGCAAAAGAAATTAACTAAGGCATCCTTAGTACCGTGTCCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCACAGCAAAAGAAATTAACTAAGGCATCCTTAGTACCGTGTCCTAC  150

seq1  AGCAGACAGTAGCATACGTTGAGTCTTCCTTTGGACCTGCAGGCTGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACAGTAGCATACGTTGAGTCTTCCTTTGGACCTGCAGGCTGTTCT  200

seq1  GCCTGTCTTATAGATGAGACCACCAAAGTTTGGGTAGGTGGGGCCATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCTTATAGATGAGACCACCAAAGTTTGGGTAGGTGGGGCCATTTT  250

seq1  TCACAGTTCTGCAGCAGTGAAGGTTGCTAAGGCCGGGTGGAAGAAGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTTCTGCAGCAGTGAAGGTTGCTAAGGCCGGGTGGAAGAAGCTCT  300

seq1  GGCCTGCCGAGTTTCGGGCATCTCACCTTCTTCTCATGGGTTAGTGTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGCCGAGTTTCGGGCATCTCACCTTCTTCTCATGGGTTAGTGTTAA  350

seq1  GCTGAGAGTCACCGTGATCTTTCCCCATGGAAAGTAGACATAGCAGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAGTCACCGTGATCTTTCCCCATGGAAAGTAGACATAGCAGATGC  400

seq1  AAATACTGACTCTTTCCTTCTGGGGCCATTTATTGAATTTCCAGTGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTGACTCTTTCCTTCTGGGGCCATTTATTGAATTTCCAGTGAATT  450

seq1  AATATAGCTTCCCACCTTGTCAGTTTTCTTTCTTCTTATTACAATAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGCTTCCCACCTTGTCAGTTTTCTTTCTTCTTATTACAATAGATA  500

seq1  CTCATGGTGGGCAGTGTTCTTACACACCTTCAGTCCCAGCTCTGGGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGTGGGCAGTGTTCTTACACACCTTCAGTCCCAGCTCTGGGGAAG  550

seq1  CAGAGGCAGGTGAATCTTTGGACTGGAGGCCAGCCTGGTCTACAGAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAGGTGAATCTTTGGACTGGAGGCCAGCCTGGTCTACAGAGTGA  600

seq1  GTTCTAGGACATCCAGGGCTACACAGAGAAACCCTGTCTTGAAAAAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGGACATCCAGGGCTACACAGAGAAACCCTGTCTTGAAAAAACAA  650

seq1  AACAAAATAAATATTCATTTTTTCCAGAGGCCTTTTGGGCACAGCAGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATAAATATTCATTTTTTCCAGAGGCCTTTTGGGCACAGCAGAGG  700

seq1  AGGTTGAGCCTTGTGTATGTGTATGCTATGGAATTC  736
      ||||||||||||||||||||||||||||||||||||
seq2  AGGTTGAGCCTTGTGTATGTGTATGCTATGGAATTC  736