BAC Information

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BAC

Clone NameB6Ng01-313H10
Chromosome8 (Build37)
Map Location 66,133,389 - 66,134,550
singlet/doubletsinglet
Overlap genenone
Upstream geneSpock3
Downstream geneLOC384831, EG244495, Tll1, LOC100040989, Cpe
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313H10.bB6Ng01-313H10.g
ACCGA104672GA104673
length1,144643
definitionB6Ng01-313H10.b B6Ng01-313H10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgaatcatgggataaaaaaatacaaactttagaaattatatt
aaaaatctaaatgctgtatgagagaaaaaacatttacatacaagggcata
aatatcagaaatacctcagccaccgtaaaagtcacaaaattatggaataa
tatattacaagctatgacagcaaataactgtgaacaaagaatgctatccc
agtaaagtgaacactaattaaggcaagtcattttaactggaaagcactgt
acaaaattcttagtaaagtgaaatacagagacaaaaaaggaaagatagac
ttttttatgacaaatcatgaaggtatatgttccgtaataggaacagatta
gcaaggttaatttggagggaaaaaccaaacacttcaagctgagctgaaat
actaacaaaggtttacagtttaaaatatgcattctatcactagaatttgc
actgatagcatcaggtgcatcaatctacataaaaataatctctctgcttt
tttatttagtggtgcgattgaacccagaccttttaacttttgtgtctgtc
ccacaccactgatctatagcatcaatatctatgttcttaatttttaaaat
atcatttacagaaaaaataaggtatgtataaagaattttaatttccttac
ctataaaatataaatgaaacttatgggtatttcattttaaataatattct
ctcatgtttatttttttattattcattccattcatttacatcaaaatgat
atcccacttgctggttaccccaaaaccgacacccccatcctacatctgtt
ctctcctctatctgtatgagagtgctcccccactcatccaccctcccctg
ctccaccgctccagcatccccctatgctgaggtttcagatttccccagga
cccagggcctccctcctattgctgtcaggcaaggccatcctctgctacat
atgtatgtgaagccatggatccctccagttacactctgaggtagagcagt
ctagtctccgggagactgggaggtcatgcagcctatatgttttccatggg
gttgcatcctcctctgtccctccagtctctgcagatcccccactaagttc
tgatcagtctgatgattgctcaacatccacatctgcatgtcagt

gaattcttttggccaaatttccatcaaatttagtaaaaatactagtagct
gaagtgagggatagggtggcaatcccacagtcacaactctgagccataat
tgttcctgcctgaaagaattacagggatggaaatggagaggagtctgagg
aaaagaagatccagggacaggcccaacatgggatccagctcaagcagagg
ttccaaggcctgacactattactgagactatggagtgctcacaaaaaagg
acctaacatgactgccctctgaaagaacaagcaagcatctgatttcaagt
cggatgcagaaatttgcatgaatggacagaaatagctgacccctgttgtt
aaattagaaaaagctgaaagaagctgaggagaggacgatcctataggaag
accagcaatctcaattaatctggacccctgagatctctccaacactggac
cacaaaacagacagcatacaccagatgatatgaggcccccaacacacata
cagtagatgacttccgggtctgtgttcattcagagatgatgcacctaacc
ctccagagactggaggcctcagggagttttaaggtcaggtggggtgagag
gtgggaacagccacatggaaaccgggggtggggaggaggtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_66133389_66134550
seq2: B6Ng01-313H10.b_46_1189

seq1  GAATTCCATGAATCATGGGATAAAAAAATACAAACTTTAGAAATTATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAATCATGGGATAAAAAAATACAAACTTTAGAAATTATATT  50

seq1  AAAAATCTAAATGCTGTATGAGAGAAAAAACATTTACATACAAGGGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTAAATGCTGTATGAGAGAAAAAACATTTACATACAAGGGCATA  100

seq1  AATATCAGAAATACCTCAGCCACCGTAAAAGTCACAAAATTATGGAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAGAAATACCTCAGCCACCGTAAAAGTCACAAAATTATGGAATAA  150

seq1  TATATTACAAGCTATGACAGCAAATAACTGTGAACAAAGAATGCTATCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTACAAGCTATGACAGCAAATAACTGTGAACAAAGAATGCTATCCC  200

seq1  AGTAAAGTGAACACTAATTAAGGCAAGTCATTTTAACTGGAAAGCACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGTGAACACTAATTAAGGCAAGTCATTTTAACTGGAAAGCACTGT  250

seq1  ACAAAATTCTTAGTAAAGTGAAATACAGAGACAAAAAAGGAAAGATAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTCTTAGTAAAGTGAAATACAGAGACAAAAAAGGAAAGATAGAC  300

seq1  TTTTTTATGACAAATCATGAAGGTATATGTTCCGTAATAGGAACAGATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATGACAAATCATGAAGGTATATGTTCCGTAATAGGAACAGATTA  350

seq1  GCAAGGTTAATTTGGAGGGAAAAACCAAACACTTCAAGCTGAGCTGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTTAATTTGGAGGGAAAAACCAAACACTTCAAGCTGAGCTGAAAT  400

seq1  ACTAACAAAGGTTTACAGTTTAAAATATGCATTCTATCACTAGAATTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAAAGGTTTACAGTTTAAAATATGCATTCTATCACTAGAATTTGC  450

seq1  ACTGATAGCATCAGGTGCATCAATCTACATAAAAATAATCTCTCTGCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAGCATCAGGTGCATCAATCTACATAAAAATAATCTCTCTGCTTT  500

seq1  TTTATTTAGTGGTGCGATTGAACCCAGACCTTTTAACTTTTGTGTCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAGTGGTGCGATTGAACCCAGACCTTTTAACTTTTGTGTCTGTC  550

seq1  CCACACCACTGATCTATAGCATCAATATCTATGTTCTTAATTTTTAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCACTGATCTATAGCATCAATATCTATGTTCTTAATTTTTAAAAT  600

seq1  ATCATTTACAGAAAAAATAAGGTATGTATAAAGAATTTTAATTTCCTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTACAGAAAAAATAAGGTATGTATAAAGAATTTTAATTTCCTTAC  650

seq1  CTATAAAATATAAATGAAACTTATGGGTATTTCATTTTAAATAATATTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAAATATAAATGAAACTTATGGGTATTTCATTTTAAATAATATTCT  700

seq1  CTCATGTTTATTTTTTTATTATTCATTCCATTCATTTACATCAAAATGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTTTATTTTTTTATTATTCATTCCATTCATTTACATCAAAATGAT  750

seq1  ATCCCACTTGCTGGTTACCCCAAAACCGACACCCCCATCCTACATCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACTTGCTGGTTACCCCAAAACCGACACCCCCATCCTACATCTGTT  800

seq1  CTCTCCTCTATCTGTATGAGAGTGCTCCCCCACTCATCCACCCTCCCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCTATCTGTATGAGAGTGCTCCCCCACTCATCCACCCTCCCCTG  850

seq1  CTCCACCGCTCCAGCATCCCCCTATGCTGAGGTTTCAGATTTCCCCAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCGCTCCAGCATCCCCCTATGCTGAGGTTTCAGATTTCCCCAGGA  900

seq1  CCCAGGGCCTCCCTCCTATTGCTGTCAGGCAAGGCCATCCTCTGCTACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGCCTCCCTCCTATTGCTGTCAGGCAAGGCCATCCTCTGCTACAT  950

seq1  ATGTATGTGAAGCCATGGATCCCTCCAGTTACACTCTGAGGTAGAGCAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTGAAGCCATGGATCCCTCCAGTTACACTCTGAGGTAGAGCAGT  1000

seq1  CTAGTCTCCGGGAGAACTGGGAGGTCATGCAAGCCTATATTGTTTTTCCA  1050
      |||||||||||||| ||||||||||||||| |||||||| ||||||  | 
seq2  CTAGTCTCCGGGAG-ACTGGGAGGTCATGC-AGCCTATA-TGTTTT--CC  1045

seq1  ATGGGGTTGCAATCCTCCTCTGCCCCTCCAGTCCTTCTGCCAGATCCCCC  1100
      |||||||||| ||||||||||| ||||||||||  |||| ||||||||||
seq2  ATGGGGTTGC-ATCCTCCTCTGTCCCTCCAGTC--TCTG-CAGATCCCCC  1091

seq1  ACTAGGTTTCCTGAGTTCAGTCTGATGGTTGGCTCCAACCATCCACATCT  1150
      |||| |||  ||||  ||||||||||| || ||||  | |||||||||||
seq2  ACTAAGTT--CTGA--TCAGTCTGATGATT-GCTC--AACATCCACATCT  1134

seq1  GCATTGGTCAGT  1162
      ||||  ||||||
seq2  GCAT--GTCAGT  1144


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