BAC Information

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BAC

Clone NameB6Ng01-313N17
Chromosome8 (Build37)
Map Location 131,441,162 - 131,442,252
singlet/doubletsinglet
Overlap geneLOC100042659
Upstream geneNrp1, LOC668494, Itgb1
Downstream geneLOC100042667, Ccdc7, 1700008F21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313N17.bB6Ng01-313N17.g
ACCGA104952GA104953
length1,1911,080
definitionB6Ng01-313N17.b B6Ng01-313N17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttacctctgttcccatttttaaatagggttatttgattc
tctcaactctaacttgttgagttctttgtatatattggatagtagccctc
tattggatgtaggattggtaaagatcttttcccaatctgttagttgccat
tttgtcatattgacagtgtcctttgtcttgcagaagatttgcagttttat
gaggtcccatttatctattgttgatcttagtgcataagccatcgattttc
tgctcaggaattttcacagtgtgtccatgtgttcgggctcttcccaactt
tttttttctattagtttcagtgtatctagttagactaacaggctggatat
gtaaacaggattcagcatttttctgcatataggaaatacacctcagtgac
aaagacagacagtaccgcagagtaaaacactgaaaagcaaatttccaagc
aaatggactcaagaaacaagatggagtacccattctaatatcgattaaaa
ttgactttcaaccaaaagttatcaaaaaagataagaaaggacactttcta
ttcatcaaaggaaaaatctaccaagatgaactctcaattctgagcatcta
cactccaaatgcaagggcacccacattcataaaataagctttacaaaagc
tcaaaatacatattgtacctcacccaataatagtgggagacttcaacacc
tcactctcatcaatggacagatcatggaaaaaaaactaaacaaagataca
gtgaaactaacagaagttataaaccaaatggatttaagaaatatctatag
aacattccatcataaaacaaaagaatataacttcttctcagcatctcatg
gtaccttctccaaaattgaccatataattggccacaaaacaggcctgaac
agatacaagaagattgaataattccatgcatcctattggattaccaagaa
ctaagctggtcttcaatagaaacatatagaatggaaaccccacatacaca
tggaagctgacatacctcaatgatacttgtcagagaaattaagaaattta
agactttttacattatgaaatgagaaccatcatacaacttatggacacaa
tgaagcatgctagaagaacctcacagctcttatgccctcagactggagga
cttaccttaacgcttgacaggtactcctcgcggtaaaaact
gaattctctatttcagattcaaaactaatttataatgctactctctgcta
ttttcctgagttataaaataaatgccattaacattatgtatgagaagaaa
agagtaaaatgtttcagtcaatattgggttttccagttgaggtagtatga
gaaatgtctggtgttcagttcgtttttatttataccttatgttacagagg
gattaggtctttgcacactgggctttagtagtggtagttattgctgtagc
atgccgtggaagagtgagtctttaagatttgtgcttttatgaaagtcctg
aggattatgttgcatagacattaagaaaccttaggaagctggccaacaac
ctccacagtaaggaagagaattttgttttccttaggaagaggaatgtcac
agtatgggcttatcactacacaactttcctcagagccttggctgctaagc
tccacaaagagggagtaacatctgaaactctctacttccttgctaggtac
cattttggtcttacataatggtctatgtactggggaaaatgataagtcca
ccctttgcagagacactataggcttctcccaggtcactgtagactggaaa
caaaaatgtcaagatctttattcagattatgatttctacttttgtacttg
ccactttcactgattacctagataaactaactttattgattactgttatt
gtagatgtacatgtgtgtgcctatgattacagaggtcatacaaatttgtg
gcatttccatttaacttacatggagaccttgcatacctttacccactgat
gcattttgcaagtgtttacctagctagattaaactcctctctaagactat
gctagctggtagactgtaatattaccatcttatatgacatggaatagaaa
cacagttaccattaagtaaacactgtttgatcagaggatacacattgacc
taagatggtaagtggaccccattcctggttgatctaggtaaggcgccata
agattctctgctctagtacgtgacaaagtgcctagagatacttcatttca
gcccccactttacactcagctagcccaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_131441162_131442252
seq2: B6Ng01-313N17.g_70_1149

seq1  GAATTCTCTATTTCAGATTCAAAACTAATTTATAATGCTACTCTCTGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATTTCAGATTCAAAACTAATTTATAATGCTACTCTCTGCTA  50

seq1  TTTTCCTGAGTTATAAAATAAATGCCATTAACATTATGTATGAGAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGAGTTATAAAATAAATGCCATTAACATTATGTATGAGAAGAAA  100

seq1  AGAGTAAAATGTTTCAGTCAATATTGGGTTTTCCAGTTGAGGTAGTATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAAATGTTTCAGTCAATATTGGGTTTTCCAGTTGAGGTAGTATGA  150

seq1  GAAATGTCTGGTGTTCAGTTCGTTTTTATTTATACCTTATGTTACAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTCTGGTGTTCAGTTCGTTTTTATTTATACCTTATGTTACAGAGG  200

seq1  GATTAGGTCTTTGCACACTGGGCTTTAGTAGTGGTAGTTATTGCTGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGGTCTTTGCACACTGGGCTTTAGTAGTGGTAGTTATTGCTGTAGC  250

seq1  ATGCCGTGGAAGAGTGAGTCTTTAAGATTTGTGCTTTTATGAAAGTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCGTGGAAGAGTGAGTCTTTAAGATTTGTGCTTTTATGAAAGTCCTG  300

seq1  AGGATTATGTTGCATAGACATTAAGAAACCTTAGGAAGCTGGCCAACAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTATGTTGCATAGACATTAAGAAACCTTAGGAAGCTGGCCAACAAC  350

seq1  CTCCACAGTAAGGAAGAGAATTTTGTTTTCCTTAGGAAGAGGAATGTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGTAAGGAAGAGAATTTTGTTTTCCTTAGGAAGAGGAATGTCAC  400

seq1  AGTATGGGCTTATCACTACACAACTTTCCTCAGAGCCTTGGCTGCTAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGGCTTATCACTACACAACTTTCCTCAGAGCCTTGGCTGCTAAGC  450

seq1  TCCACAAAGAGGGAGTAACATCTGAAACTCTCTACTTCCTTGCTAGGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAAAGAGGGAGTAACATCTGAAACTCTCTACTTCCTTGCTAGGTAC  500

seq1  CATTTTGGTCTTACATAATGGTCTATGTACTGGGGAAAATGATAAGTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGGTCTTACATAATGGTCTATGTACTGGGGAAAATGATAAGTCCA  550

seq1  CCCTTTGCAGAGACACTATAGGCTTCTCCCAGGTCACTGTAGACTGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGCAGAGACACTATAGGCTTCTCCCAGGTCACTGTAGACTGGAAA  600

seq1  CAAAAATGTCAAGATCTTTATTCAGATTATGATTTCTACTTTTGTACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATGTCAAGATCTTTATTCAGATTATGATTTCTACTTTTGTACTTG  650

seq1  CCACTTTCACTGATTACCTAGATAAACTAACTTTATTGATTACTGTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTCACTGATTACCTAGATAAACTAACTTTATTGATTACTGTTATT  700

seq1  GTAGATGTACATGTGTGTGCCTATGATTACAGAGGTCATACAAATTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATGTACATGTGTGTGCCTATGATTACAGAGGTCATACAAATTTGTG  750

seq1  GCATTTCCATTTAACTTACATGGAGACCTTGCATACCTTTACCCACTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCCATTTAACTTACATGGAGACCTTGCATACCTTTACCCACTGAT  800

seq1  GCATTTTGCAAGTGTTTACCTAGCTAGATTAAACTCCTCTCTAAGACTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTGCAAGTGTTTACCTAGCTAGATTAAACTCCTCTCTAAGACTAT  850

seq1  GCTAGCTGGTAGACTGTAATATTACCATCTTATATGACATGGAATAGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTGGTAGACTGTAATATTACCATCTTATATGACATGGAATAGAAA  900

seq1  CACAGTTACCATTAAGTAAACACTGTTTGATCAGAGGATACACATTGACC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTACCATTAAGTAAACACTGTTTGATCAGAGGATACACATTGACC  950

seq1  TAAGGATGGTAAGTGGACCCCATTCCTGGTTGATCTAGGTAAGGGCGCCA  1000
      ||| |||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAA-GATGGTAAGTGGACCCCATTCCTGGTTGATCTAGGTAA-GGCGCCA  998

seq1  TAAGATTCTCTGGCTCTAGTTACGTGACAAAGTGGCCTAGAGATACTTTC  1050
      ||||||||||| ||||||| ||||||||||||| |||||||||||| |||
seq2  TAAGATTCTCT-GCTCTAG-TACGTGACAAAGT-GCCTAGAGATAC-TTC  1044

seq1  ATTTCAAGCCCCACCTTACACTCAGCCTTAAGGCCCCAAAG  1091
      ||||||  |||||| |||||||||||  ||    |||||||
seq2  ATTTCAGCCCCCACTTTACACTCAGC--TA---GCCCAAAG  1080