BAC Information

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BAC

Clone NameB6Ng01-314K23
Chromosome8 (Build37)
Map Location 50,409,849 - 50,582,429
singlet/doubletdoublet
Overlap gene4930555F03Rik
Upstream geneOdz3, 2900073C17Rik, LOC100039866
Downstream geneLOC100039919, EG667495, LOC100039954
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314K23.bB6Ng01-314K23.g
ACCGA105545GA105546
length1,0911,016
definitionB6Ng01-314K23.b B6Ng01-314K23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,581,353 - 50,582,429)(50,409,849 - 50,410,864)
sequence
aggatttgtcccacacctgactccaggttttctattggacaatctatggc
tcctgggaggaaaatcattccctgtgtagaataactccaattacatactt
ttatatgaatatatagttatacacatagtacatcattatttaagaaggtg
gcacacacctttaatcccagcacttgggaggcaggtggatttctgagttc
taggccagcctagtctacagaatgagttctaggacagccagggctataca
gagaaactctgtttcgaaaaagaaacaaacaaaaaacaaacaaacaaaca
acaaaaaaagaagcttctaaaatagtaggcttccatacaaccttttcaaa
catcctagggattcatcagccctctccttacctcatctgccccaccctcc
agctccctcccaacttaaacttccctcccaggaaaaaagagttaatgaat
taaaaattttaaatatgttatgcaaaattatttcaaatacaagtgaacat
acatatacacaaatgtattcattaaagaaaaagaagaaatttttaaaatt
ctgagttgttttagttgaagtggtagaaggaattacataccccgttccta
tatcttcatgtatgtacttagtgtaaagagactctggactccaaatattt
gagagaagaaaaatactttaaaaacaaatatttatctggaaatgtgcaat
aatgaaaacacaggaaaaaaaagtatgcttacctcatctctacttttaaa
aaaaagaacacaatgattattatcaaagataatctgtctaggtatcaaaa
cacaatgattattatcaaagataatctgtctaaaggtatcaaaacattac
cccatctaggtgagttctgattatacccaagtccacgttcatcctagaat
aatctctacgctcacggaatgatcgatcgcattaccccttcttcttggta
gagagacactggttatttggtgtcttctcactttgggaccctgtgccttc
tgttaggacctggatgttacaaagcagtgccaaggtaatcccactgtctt
cctctctaatattaaggctggtttccctcccacgttggaga
gaattcaagaaatcaagacatatggacattgatacaaacttacccgctct
aagcacttagaacatacaccattgcctggctgggccattgtgaagaaatg
gccactgtgaggacagttgaaaaagaagccttcatcacttatgacatatt
gcctttcctcacctgatcccatttatatgacatatgctagtattgatgga
catgcagtgtagaatggctggaggcatcgtattagtcactacaatcacca
gccccagtaattgacataagagggcctctgctctggcaatgtgagccaac
acaaactgtttcatgtagcactgaaccatttactcagagagccagatgcc
tttccaaaaattggaaaattccttctctagctgaattaaaatgttactta
acagcaaaaagggttttaattgccagaaatagctatcagaaccacaccca
aatttggaacatatgtgcatgttctgtagtccaacagatatggaaacttg
acaaacggtgagttattctaaaaagaagtatctgtcatcctgagtgaggc
aaaccaatcacaaagaagacacatgatatgcactcactgataagtggata
ttaacccagaaacttagactacccaagatacaatatgcaaaacacatgaa
actcaagaagaaggaagaccaaagtgtggatacttcgttccttctaagaa
tggggaataaaaaatacccatggaaggatttacagagacaaagttcagag
ctgagacagaaggaaagaccatccagagacttccccacctggggatccat
cccataaacaaccgccaaacccaggcactgttgcttatgccattaagatt
ttgctaaaagaaccctgatatagctgtctcctgtgaggttatgccagtgc
ctgggcaaatacagaagtggatactttacagtcatctattggatagaaca
caggtccctaaaagatgtgctagagaaaaatacaacagagctaaggagtc
tgcacccctataggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_50581353_50582429
seq2: B6Ng01-314K23.b_57_1147 (reverse)

seq1  TCTCC-ACGTGG--AGGAAACCAGGC-TAATA-TAGAGA-GAAGACAGTG  44
      ||||| ||||||   ||||||||| | ||||| |||||| ||||||||||
seq2  TCTCCAACGTGGGAGGGAAACCAGCCTTAATATTAGAGAGGAAGACAGTG  50

seq1  GATTTAC--TTGCACTGCTTTGTAACAT-CAGGTCCTAACAGA--GCACA  89
      |  ||||  | ||||||||||||||||| ||||||||||||||  |||||
seq2  GGATTACCTTGGCACTGCTTTGTAACATCCAGGTCCTAACAGAAGGCACA  100

seq1  GGGT-CCAAAGTGGAGAAGACACCAAATAA-CAGTGTCTCTCTACCAAG-  136
      |||| ||||||| ||||||||||||||||| |||||||||||||||||| 
seq2  GGGTCCCAAAGT-GAGAAGACACCAAATAACCAGTGTCTCTCTACCAAGA  149

seq1  AGAAGGGGTAATGCGATCGATCATTCCGTGAGCGTAGAGATTATTCTAGG  186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGGTAATGCGATCGATCATTCCGTGAGCGTAGAGATTATTCTAGG  199

seq1  ATGAACGTGGACTTGGGTATAATCAGAACTCACCTAGATGGGGTAATGTT  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACGTGGACTTGGGTATAATCAGAACTCACCTAGATGGGGTAATGTT  249

seq1  TTGATACC-TTAGACAGATTATCTTTGATAATAATCATTGTGTTTTGATA  285
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACCTTTAGACAGATTATCTTTGATAATAATCATTGTGTTTTGATA  299

seq1  CCTAGACAGATTATCTTTGATAATAATCATTGTGTTCTTTTTTTTAAAAG  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACAGATTATCTTTGATAATAATCATTGTGTTCTTTTTTTTAAAAG  349

seq1  TAGAGATGAGGTAAGCATACTTTTTTTTCCTGTGTTTTCATTATTGCACA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATGAGGTAAGCATACTTTTTTTTCCTGTGTTTTCATTATTGCACA  399

seq1  TTTCCAGATAAATATTTGTTTTTAAAGTATTTTTCTTCTCTCAAATATTT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGATAAATATTTGTTTTTAAAGTATTTTTCTTCTCTCAAATATTT  449

seq1  GGAGTCCAGAGTCTCTTTACACTAAGTACATACATGAAGATATAGGAACG  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCAGAGTCTCTTTACACTAAGTACATACATGAAGATATAGGAACG  499

seq1  GGGTATGTAATTCCTTCTACCACTTCAACTAAAACAACTCAGAATTTTAA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATGTAATTCCTTCTACCACTTCAACTAAAACAACTCAGAATTTTAA  549

seq1  AAATTTCTTCTTTTTCTTTAATGAATACATTTGTGTATATGTATGTTCAC  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTTCTTTTTCTTTAATGAATACATTTGTGTATATGTATGTTCAC  599

seq1  TTGTATTTGAAATAATTTTGCATAACATATTTAAAATTTTTAATTCATTA  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTGAAATAATTTTGCATAACATATTTAAAATTTTTAATTCATTA  649

seq1  ACTCTTTTTTCCTGGGAGGGAAGTTTAAGTTGGGAGGGAGCTGGAGGGTG  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTTTTCCTGGGAGGGAAGTTTAAGTTGGGAGGGAGCTGGAGGGTG  699

seq1  GGGCAGATGAGGTAAGGAGAGGGCTGATGAATCCCTAGGATGTTTGAAAA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGATGAGGTAAGGAGAGGGCTGATGAATCCCTAGGATGTTTGAAAA  749

seq1  GGTTGTATGGAAGCCTACTATTTTAGAAGCTTCTTTTTTTGTTGTTTGTT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTATGGAAGCCTACTATTTTAGAAGCTTCTTTTTTTGTTGTTTGTT  799

seq1  TGTTTGTTTTTTGTTTGTTTCTTTTTCGAAACAGAGTTTCTCTGTATAGC  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTTTTGTTTGTTTCTTTTTCGAAACAGAGTTTCTCTGTATAGC  849

seq1  CCTGGCTGTCCTAGAACTCATTCTGTAGACTAGGCTGGCCTAGAACTCAG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTCCTAGAACTCATTCTGTAGACTAGGCTGGCCTAGAACTCAG  899

seq1  AAATCCACCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTGCCACCTTCT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTGCCACCTTCT  949

seq1  TAAATAATGATGTACTATGTGTATAACTATATATTCATATAAAAGTATGT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATGATGTACTATGTGTATAACTATATATTCATATAAAAGTATGT  999

seq1  AATTGGAGTTATTCTACACAGGGAATGATTTTCCTCCCAGGAGCCATAGA  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGAGTTATTCTACACAGGGAATGATTTTCCTCCCAGGAGCCATAGA  1049

seq1  TTGTCCAATAGAAAACCTGGAGTCAGGTGTGGGACAAATCCT  1077
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCAATAGAAAACCTGGAGTCAGGTGTGGGACAAATCCT  1091

seq1: chr8_50409849_50410864
seq2: B6Ng01-314K23.g_66_1081

seq1  GAATTCAAGAAATCAAGACATATGGACATTGATACAAACTTACCCGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAATCAAGACATATGGACATTGATACAAACTTACCCGCTCT  50

seq1  AAGCACTTAGAACATACACCATTGCCTGGCTGGGCCATTGTGAAGAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTTAGAACATACACCATTGCCTGGCTGGGCCATTGTGAAGAAATG  100

seq1  GCCACTGTGAGGACAGTTGAAAAAGAAGCCTTCATCACTTATGACATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGTGAGGACAGTTGAAAAAGAAGCCTTCATCACTTATGACATATT  150

seq1  GCCTTTCCTCACCTGATCCCATTTATATGACATATGCTAGTATTGATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCCTCACCTGATCCCATTTATATGACATATGCTAGTATTGATGGA  200

seq1  CATGCAGTGTAGAATGGCTGGAGGCATCGTATTAGTCACTACAATCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGTGTAGAATGGCTGGAGGCATCGTATTAGTCACTACAATCACCA  250

seq1  GCCCCAGTAATTGACATAAGAGGGCCTCTGCTCTGGCAATGTGAGCCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGTAATTGACATAAGAGGGCCTCTGCTCTGGCAATGTGAGCCAAC  300

seq1  ACAAACTGTTTCATGTAGCACTGAACCATTTACTCAGAGAGCCAGATGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTGTTTCATGTAGCACTGAACCATTTACTCAGAGAGCCAGATGCC  350

seq1  TTTCCAAAAATTGGAAAATTCCTTCTCTAGCTGAATTAAAATGTTACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAAATTGGAAAATTCCTTCTCTAGCTGAATTAAAATGTTACTTA  400

seq1  ACAGCAAAAAGGGTTTTAATTGCCAGAAATAGCTATCAGAACCACACCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAAAAGGGTTTTAATTGCCAGAAATAGCTATCAGAACCACACCCA  450

seq1  AATTTGGAACATATGTGCATGTTCTGTAGTCCAACAGATATGGAAACTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGAACATATGTGCATGTTCTGTAGTCCAACAGATATGGAAACTTG  500

seq1  ACAAACGGTGAGTTATTCTAAAAAGAAGTATCTGTCATCCTGAGTGAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACGGTGAGTTATTCTAAAAAGAAGTATCTGTCATCCTGAGTGAGGC  550

seq1  AAACCAATCACAAAGAAGACACATGATATGCACTCACTGATAAGTGGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAATCACAAAGAAGACACATGATATGCACTCACTGATAAGTGGATA  600

seq1  TTAACCCAGAAACTTAGACTACCCAAGATACAATATGCAAAACACATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCCAGAAACTTAGACTACCCAAGATACAATATGCAAAACACATGAA  650

seq1  ACTCAAGAAGAAGGAAGACCAAAGTGTGGATACTTCGTTCCTTCTAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGAAGAAGGAAGACCAAAGTGTGGATACTTCGTTCCTTCTAAGAA  700

seq1  TGGGGAATAAAAAATACCCATGGAAGGATTTACAGAGACAAAGTTCAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAATAAAAAATACCCATGGAAGGATTTACAGAGACAAAGTTCAGAG  750

seq1  CTGAGACAGAAGGAAAGACCATCCAGAGACTTCCCCACCTGGGGATCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACAGAAGGAAAGACCATCCAGAGACTTCCCCACCTGGGGATCCAT  800

seq1  CCCATAAACAACCGCCAAACCCAGGCACTGTTGCTTATGCCATTAAGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAAACAACCGCCAAACCCAGGCACTGTTGCTTATGCCATTAAGATT  850

seq1  TTGCTAAAAGAACCCTGATATAGCTGTCTCCTGTGAGGTTATGCCAGTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAAAGAACCCTGATATAGCTGTCTCCTGTGAGGTTATGCCAGTGC  900

seq1  CT-GGCAAATACAGAAGTGGATAC-TTACAGTCATCTATTGGATAGAACA  948
      || ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTGGGCAAATACAGAAGTGGATACTTTACAGTCATCTATTGGATAGAACA  950

seq1  CAGGGCCCCTAAAGAAGGTGCTAGAG-AAAATACACAAGGAGCTAAAGGA  997
      || || |||||||  | ||||||||| |||||||| |  ||||| |||||
seq2  CA-GGTCCCTAAAAGATGTGCTAGAGAAAAATACA-ACAGAGCT-AAGGA  997

seq1  GTCTGCAACCCTATAGGAG  1016
      ||||||| |||||||||||
seq2  GTCTGCACCCCTATAGGAG  1016