BAC Information

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BAC

Clone NameB6Ng01-319H15
Chromosome8 (Build37)
Map Location 38,789,407 - 38,790,527
singlet/doubletsinglet
Overlap geneSgcz
Upstream geneA730069N07Rik, AI429214, LOC666877, LOC100041616, 1700016D18Rik, LOC641121, LOC621149
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319H15.bB6Ng01-319H15.g
ACCGA109095GA109096
length1,1291,222
definitionB6Ng01-319H15.b B6Ng01-319H15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatcaaatctttatcaagaatcataaaatcatcaagtcatctaa
atagcatgattccataaaagttcttcttcatgttgatttgtaagaaagtt
gtccaatagagtgggctaatacttggagtcaatcataacacgctacaggc
agatatttctttacccactcacactatgtcagaaaaattaggaatacagc
aatgcaaaccatgagaatgcataggagtagcaagaagaaatcctgggatg
aagaactgggttgatgtctctccaggattcacccatcacagcaatacaaa
gcagtgggccctatccaggaaactcacatgcctcctgcagctcctccagc
agagcatctgccagagttactccaactaggtctccaataggacctatttc
cattatccgttagacttgcacatgtaatctaattatgtgtaacacagagt
tatctgcacaaacatgttttgcaataatatgtataataccaatgtattat
atttttatagatatctattagcagagaactataaataaatatgacacaca
cacacacacacacacacacacacacacacacacacacacactagttttag
tatgtcctaaagaatattgaagtcttttgaatggaaatgactaaatgcag
ctcaagatagtgtcacaaaagataaacttagaaagccaaatactgagttt
tctctcaaatgtgatatacaagacacaaaaagtaggagcaatatctgggc
agaggaaacagatgagaagcaccaaggggtaggtagacaaagagtaaatc
tcattatattaatatggcggtactacttgattttttgaaaaaaatatcct
tatgaaacttatcattatatatataatgattatataccaatttaaatgtg
ggaagaataagcatgtatgataaagagaggaaattttaaagtacaaagga
tggttgagtttgcatgaatgtaacagaacccaagctagaaaacggagagg
gagagatatgctagcttctattatactctgatgtatgacagtgtcatctt
aaagaagaaaatttgtacataatttgcaataaggtttgaaagggaaccag
atgattatgatcagaaatattcggcagta
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacatc
agatgctggcgaggatgtggagaaagaggaacactcccccattgttggtt
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
acatatccagaagatgccccaactggtaagaaggacacatgctccactat
gatcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctatttaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacatccttggaaggagttacagagacaaagtttggagctgagatga
aatgatggaccattagagactgctatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgctggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggaggagctagagaatgtacccaaggagctaaagggatctgaaacccta
taggtggatcacattatgaactaaccagtaccccggagcttcttgacttc
tagctgcattatattatcaaaagaatcgcctagtcgcatcactggaaaga
agagagccaattggacaatacaactttatatgccccaggaacaaggttac
gtcaagtccaaatggggattggtggtgggatagtgtaatctgagacatcc
aatcagtcgagtgcgcactagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_38789407_38790527
seq2: B6Ng01-319H15.b_50_1178 (reverse)

seq1  TACTGC--GATATTTCTGATTCATTATCATCTTGGT-CCTTTC-AACCTT  46
      ||||||   |||||||||| |||| ||||||| | | |||||| ||||||
seq2  TACTGCCGAATATTTCTGA-TCATAATCATCTGGTTCCCTTTCAAACCTT  49

seq1  ATTGCAAATTATGTACAAATTTTC-TCTTTAAGATGACACTGTCATACAT  95
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATTGCAAATTATGTACAAATTTTCTTCTTTAAGATGACACTGTCATACAT  99

seq1  CAGAGTATAATAGAAGCTAGCATATCTCT-CCTCTCCG-TTTCTAGCTT-  142
      ||||||||||||||||||||||||||||| |||||||| |||||||||| 
seq2  CAGAGTATAATAGAAGCTAGCATATCTCTCCCTCTCCGTTTTCTAGCTTG  149

seq1  GGTTCTGTTACATTCATGCAAACTCAACCAT-CTTTGTACTTTAAAATTT  191
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGTTCTGTTACATTCATGCAAACTCAACCATCCTTTGTACTTTAAAATTT  199

seq1  CCTCTCTTTATCATACATGCTTATTCTTCCCACATTTAAATTGGTATATA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTTATCATACATGCTTATTCTTCCCACATTTAAATTGGTATATA  249

seq1  ATCATTATATATATAATGATAAGTTTCATAAGGATATTTTTTTCAAAAAA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTATATATATAATGATAAGTTTCATAAGGATATTTTTTTCAAAAAA  299

seq1  TCAAGTAGTACCGCCATATTAATATAATGAGATTTACTCTTTGTCTACCT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTAGTACCGCCATATTAATATAATGAGATTTACTCTTTGTCTACCT  349

seq1  ACCCCTTGGTGCTTCTCATCTGTTTCCTCTGCCCAGATATTGCTCCTACT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTGGTGCTTCTCATCTGTTTCCTCTGCCCAGATATTGCTCCTACT  399

seq1  TTTTGTGTCTTGTATATCACATTTGAGAGAAAACTCAGTATTTGGCTTTC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGTCTTGTATATCACATTTGAGAGAAAACTCAGTATTTGGCTTTC  449

seq1  TAAGTTTATCTTTTGTGACACTATCTTGAGCTGCATTTAGTCATTTCCAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTATCTTTTGTGACACTATCTTGAGCTGCATTTAGTCATTTCCAT  499

seq1  TCAAAAGACTTCAATATTCTTTAGGACATACTAAAACTAGTGTGTGTGTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGACTTCAATATTCTTTAGGACATACTAAAACTAGTGTGTGTGTG  549

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCATATTTATTTAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCATATTTATTTAT  599

seq1  AGTTCTCTGCTAATAGATATCTATAAAAATATAATACATTGGTATTATAC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCTGCTAATAGATATCTATAAAAATATAATACATTGGTATTATAC  649

seq1  ATATTATTGCAAAACATGTTTGTGCAGATAACTCTGTGTTACACATAATT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATTGCAAAACATGTTTGTGCAGATAACTCTGTGTTACACATAATT  699

seq1  AGATTACATGTGCAAGTCTAACGGATAATGGAAATAGGTCCTATTGGAGA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACATGTGCAAGTCTAACGGATAATGGAAATAGGTCCTATTGGAGA  749

seq1  CCTAGTTGGAGTAACTCTGGCAGATGCTCTGCTGGAGGAGCTGCAGGAGG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTGGAGTAACTCTGGCAGATGCTCTGCTGGAGGAGCTGCAGGAGG  799

seq1  CATGTGAGTTTCCTGGATAGGGCCCACTGCTTTGTATTGCTGTGATGGGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAGTTTCCTGGATAGGGCCCACTGCTTTGTATTGCTGTGATGGGT  849

seq1  GAATCCTGGAGAGACATCAACCCAGTTCTTCATCCCAGGATTTCTTCTTG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTGGAGAGACATCAACCCAGTTCTTCATCCCAGGATTTCTTCTTG  899

seq1  CTACTCCTATGCATTCTCATGGTTTGCATTGCTGTATTCCTAATTTTTCT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCCTATGCATTCTCATGGTTTGCATTGCTGTATTCCTAATTTTTCT  949

seq1  GACATAGTGTGAGTGGGTAAAGAAATATCTGCCTGTAGCGTGTTATGATT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGTGTGAGTGGGTAAAGAAATATCTGCCTGTAGCGTGTTATGATT  999

seq1  GACTCCAAGTATTAGCCCACTCTATTGGACAACTTTCTTACAAATCAACA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAAGTATTAGCCCACTCTATTGGACAACTTTCTTACAAATCAACA  1049

seq1  TGAAGAAGAACTTTTATGGAATCATGCTATTTAGATGACTTGATGATTTT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGAACTTTTATGGAATCATGCTATTTAGATGACTTGATGATTTT  1099

seq1  ATGATTCTTGATAAAGATTTGATAGAATTC  1121
      ||||||||||||||||||||||||||||||
seq2  ATGATTCTTGATAAAGATTTGATAGAATTC  1129