BAC Information

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BAC

Clone NameB6Ng01-320C10
Chromosome8 (Build37)
Map Location 112,318,229 - 112,470,780
singlet/doubletdoublet
Overlap geneAp1g1, Phlppl
Upstream geneAtbf1, 4922502B01Rik, Gm1943, LOC100042829, Pmfbp1, Dhx38, Txnl4b, Hp, Dhodh, Pkd1l3, 2400003C14Rik, 4930566A11Rik, D8Ertd587e, LOC668089, LOC672735
Downstream geneMarveld3, LOC100041884, Tat, Chst4, Zfp612, Gm1467, Calb2, BC025546, Hydin, LOC672398, Vac14, BC060632, 2010004A03Rik, Sf3b3, Cog4, Fuk, St3gal2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320C10.bB6Ng01-320C10.g
ACCGA109598GA109599
length1,141520
definitionB6Ng01-320C10.b B6Ng01-320C10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,469,647 - 112,470,780)(112,318,229 - 112,318,754)
sequence
gaattcttaagaaatgaggcaaagctcagggagaattaatcagggaaatc
tctattgtcacccttggcctggtagtgattagtgtcccgcactaaggctt
gataagtgacaaagaaactttgacaatcgccaaaatcacatgtgtgccct
tcaacaaaagactggcacccccagggcactgttttcatgatttctctgtg
ttcctattgttatctctgcccaccttggatctttcactggataaggtaga
ctgactatgtgaccccagccctgtgtccggttggctcctgggtggcagct
cctcttctgattagaacccatcagggagtaaactaaccacactgccacaa
gtccagagttcagtactagaaaccctctagcaaacccgatgggattcact
atttgtcgggttacgctgacttgtcattcgtgtgctacaaatgaggaggc
aaggtccaagaagggcaagggctgatgttccttaccagcgactcactgca
gaacattattgttcagtggtatagaagttcttcctatctaccactttggc
acaaatgaccgaagctgtgacttctgttcaatgttaaactgctttaaaca
ggttaactttcccacagtcacaaaacctgtaagcagcggagataagactt
ggacacagaatagagggatggcttagcagttatgaggatgcttttcccag
catccaatcaggtggcccacaacctcctataactaaacctccaggggacc
tgctatcttcctctggagtccacaagcacatgtgcacacacacacacaca
cacacacccataattaaaaagaaaaatagatcttaaacacacacacacca
ccaccaccaccaccacggccctctgagtcataatagaggtgtgttacaag
taacagaaaagtcccttgtgggccttcaggacgccgtggaatatccactg
gcactgggaaaacaaacttgagaccacttgtgccacctcagcccatatat
cacatgggacaagaggtatcaagagcggggggtacagtgcttgccctggc
aggcaccacgaaagagcctgagtgttgctgccaagaaaccaggtgtttaa
attgttgattcgatgaagagcaggcctgaaagaatgacttc
aatcactatcttttcgcatagtctggtggccaggaaaacccagtttttcc
tgtctttgcttcttttccctccccaatcctcaatgctggcagtacagtca
tgagtgtgctatgtctggggcttgtgctgggatctgaagtctggtactca
tgtttgcacagcaagtgtctgttgtgtctggttggtgttttggtgtttct
ttgctgcaatgaaaacactatgaccaacaagcaagctggggaggaaagtg
tttatttggcttacatttcaggttgacataggctagccagtgcatctggt
aaactatctccccagcactttttgttgttgttcttttggtattgttgatt
gaagccagggtcttgtggatagatggcacaatctgtatcatcaagctata
gccatatccctttgtggtcttttagtactttgaaaaataaagcttggtgt
ggtagtgcatacctactattccagcttttgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_112469647_112470780
seq2: B6Ng01-320C10.b_47_1187 (reverse)

seq1  GAAGTCA-TCTTTCAGGCTTCCTCTTCATCCGGAATCAACATTTTAAACA  49
      ||||||| |||||||||| | |||||||||  ||||||||| ||||||||
seq2  GAAGTCATTCTTTCAGGCCTGCTCTTCATC--GAATCAACAATTTAAACA  48

seq1  CTTGGTTTCTTGGCAGC-ACACTCA-GCTCTTTCGGTGTGCCTGCCA-GG  96
      | ||||||||||||||| ||||||| |||||||||  |||||||||| ||
seq2  CCTGGTTTCTTGGCAGCAACACTCAGGCTCTTTCGTGGTGCCTGCCAGGG  98

seq1  CAAGCACTGTACCCCCGCTTCTTGATACCTC-TGTCCCATGTGATATATG  145
      ||||||||||||||||   |||||||||||| ||||||||||||||||||
seq2  CAAGCACTGTACCCCCCGCTCTTGATACCTCTTGTCCCATGTGATATATG  148

seq1  GGCTGAGGTGGCACAAGTGGTCTCAAGTTTGTTTT-CCAGTGCCAGT-GA  193
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  GGCTGAGGTGGCACAAGTGGTCTCAAGTTTGTTTTCCCAGTGCCAGTGGA  198

seq1  TATTCCACGGCGTCCTGAAGG-CCACAA-GGACTTGTCTGTTACTTGTAA  241
      ||||||||||||||||||||| |||||| |||||| ||||||||||||||
seq2  TATTCCACGGCGTCCTGAAGGCCCACAAGGGACTTTTCTGTTACTTGTAA  248

seq1  CACACCTCTATTATGACTCAGAGGGCCGTGGTGGTGGTGGTGGTGGTGTG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTCTATTATGACTCAGAGGGCCGTGGTGGTGGTGGTGGTGGTGTG  298

seq1  TGTGTGTTTAAGATCTATTTTTCTTTTTAATTATGGGTGTGTGTGTGTGT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTTAAGATCTATTTTTCTTTTTAATTATGGGTGTGTGTGTGTGT  348

seq1  GTGTGTGTGCACATGTGCTTGTGGACTCCAGAGGAAGATAGCAGGTCCCC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGCACATGTGCTTGTGGACTCCAGAGGAAGATAGCAGGTCCCC  398

seq1  TGGAGGTTTAGTTATAGGAGGTTGTGGGCCACCTGATTGGATGCTGGGAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTTTAGTTATAGGAGGTTGTGGGCCACCTGATTGGATGCTGGGAA  448

seq1  AAGCATCCTCATAACTGCTAAGCCATCCCTCTATTCTGTGTCCAAGTCTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCCTCATAACTGCTAAGCCATCCCTCTATTCTGTGTCCAAGTCTT  498

seq1  ATCTCCGCTGCTTACAGGTTTTGTGACTGTGGGAAAGTTAACCTGTTTAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCGCTGCTTACAGGTTTTGTGACTGTGGGAAAGTTAACCTGTTTAA  548

seq1  AGCAGTTTAACATTGAACAGAAGTCACAGCTTCGGTCATTTGTGCCAAAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTTAACATTGAACAGAAGTCACAGCTTCGGTCATTTGTGCCAAAG  598

seq1  TGGTAGATAGGAAGAACTTCTATACCACTGAACAATAATGTTCTGCAGTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGATAGGAAGAACTTCTATACCACTGAACAATAATGTTCTGCAGTG  648

seq1  AGTCGCTGGTAAGGAACATCAGCCCTTGCCCTTCTTGGACCTTGCCTCCT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGCTGGTAAGGAACATCAGCCCTTGCCCTTCTTGGACCTTGCCTCCT  698

seq1  CATTTGTAGCACACGAATGACAAGTCAGCGTAACCCGACAAATAGTGAAT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTAGCACACGAATGACAAGTCAGCGTAACCCGACAAATAGTGAAT  748

seq1  CCCATCGGGTTTGCTAGAGGGTTTCTAGTACTGAACTCTGGACTTGTGGC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCGGGTTTGCTAGAGGGTTTCTAGTACTGAACTCTGGACTTGTGGC  798

seq1  AGTGTGGTTAGTTTACTCCCTGATGGGTTCTAATCAGAAGAGGAGCTGCC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGTTAGTTTACTCCCTGATGGGTTCTAATCAGAAGAGGAGCTGCC  848

seq1  ACCCAGGAGCCAACCGGACACAGGGCTGGGGTCACATAGTCAGTCTACCT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGAGCCAACCGGACACAGGGCTGGGGTCACATAGTCAGTCTACCT  898

seq1  TATCCAGTGAAAGATCCAAGGTGGGCAGAGATAACAATAGGAACACAGAG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGTGAAAGATCCAAGGTGGGCAGAGATAACAATAGGAACACAGAG  948

seq1  AAATCATGAAAACAGTGCCCTGGGGGTGCCAGTCTTTTGTTGAAGGGCAC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATGAAAACAGTGCCCTGGGGGTGCCAGTCTTTTGTTGAAGGGCAC  998

seq1  ACATGTGATTTTGGCGATTGTCAAAGTTTCTTTGTCACTTATCAAGCCTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGATTTTGGCGATTGTCAAAGTTTCTTTGTCACTTATCAAGCCTT  1048

seq1  AGTGCGGGACACTAATCACTACCAGGCCAAGGGTGACAATAGAGATTTCC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCGGGACACTAATCACTACCAGGCCAAGGGTGACAATAGAGATTTCC  1098

seq1  CTGATTAATTCTCCCTGAGCTTTGCCTCATTTCTTAAGAATTC  1134
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTAATTCTCCCTGAGCTTTGCCTCATTTCTTAAGAATTC  1141

seq1: chr8_112318229_112318754
seq2: B6Ng01-320C10.g_68_593

seq1  GAATTCAATCACTATCTTTTCGCATAGTCTGGTGGCCAGGAAAACCCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCACTATCTTTTCGCATAGTCTGGTGGCCAGGAAAACCCAGT  50

seq1  TTTTCCTGTCTTTGCTTCTTTTCCCTCCCCAATCCTCAATGCTGGCAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGTCTTTGCTTCTTTTCCCTCCCCAATCCTCAATGCTGGCAGTA  100

seq1  CAGTCATGAGTGTGCTATGTCTGGGGCTTGTGCTGGGATCTGAAGTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATGAGTGTGCTATGTCTGGGGCTTGTGCTGGGATCTGAAGTCTGG  150

seq1  TACTCATGTTTGCACAGCAAGTGTCTGTTGTGTCTGGTTGGTGTTTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATGTTTGCACAGCAAGTGTCTGTTGTGTCTGGTTGGTGTTTTGGT  200

seq1  GTTTCTTTGCTGCAATGAAAACACTATGACCAACAAGCAAGCTGGGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTGCTGCAATGAAAACACTATGACCAACAAGCAAGCTGGGGAGG  250

seq1  AAAGTGTTTATTTGGCTTACATTTCAGGTTGACATAGGCTAGCCAGTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTTTATTTGGCTTACATTTCAGGTTGACATAGGCTAGCCAGTGCA  300

seq1  TCTGGTAAACTATCTCCCCAGCACTTTTTGTTGTTGTTCTTTTGGTATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTAAACTATCTCCCCAGCACTTTTTGTTGTTGTTCTTTTGGTATTG  350

seq1  TTGATTGAAGCCAGGGTCTTGTGGATAGATGGCACAATCTGTATCATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGAAGCCAGGGTCTTGTGGATAGATGGCACAATCTGTATCATCAA  400

seq1  GCTATAGCCATATCCCTTTGTGGTCTTTTAGTACTTTGAAAAATAAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAGCCATATCCCTTTGTGGTCTTTTAGTACTTTGAAAAATAAAGCT  450

seq1  TGGTGTGGTAGTGCATACCTACTATTCCAGCTTTTGTGTGTGTGTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGGTAGTGCATACCTACTATTCCAGCTTTTGTGTGTGTGTGTGTG  500

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTG  526
      ||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTG  526