BAC Information

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BAC

Clone NameB6Ng01-321D21
Chromosome8 (Build37)
Map Location 68,607,327 - 68,742,321
singlet/doubletdoublet
Overlap geneMarch1
Upstream geneLOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321D21.bB6Ng01-321D21.g
ACCGA110403GA110404
length1,1181,012
definitionB6Ng01-321D21.b B6Ng01-321D21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,740,989 - 68,742,321)(68,607,327 - 68,608,315)
sequence
gaattccatttccttgttaaaaccagagcttgcattttaaaactaatgtc
tgaattcacggtggtcttattttactgcatactcttttttgaaatgtctc
ttatttaattattgtaaattagccaatattctattttataattttacgtt
ccttcttgtttttctttaaaaagtaaagactttgtcatcgggcaagcatg
ttggaaattataaaacatagtaatttgtaagattataaaaataaacaagg
agctaaattttacttttgaagatggaagcttctcaattattggtaaccga
attctcaactccagaatctatggagaacatgtaacagtaattctgtgacg
cttctgcaattacaaacactctggatgggggaaccatgaagctttactct
tggagtactgacagagtaacaacaaaattactcacattaatacagcaggt
acttaactttataattatgtttatattatactttatatataaaaattata
tatgtgtgtatattatataactttatagttatacttaaaattctaaaaat
atatgattttggtagtgtcaattggatatttaaaccatacatacatcaag
tttcaatcataattgtagtaccttcaaatatatattaacacgtaagacct
gttaaatagatttcatctgacacagttacaggtaatcagattctagtaat
tttgtgcttgatgctcaaagtcagccaatcaggaagtgggcagaggaaga
atgatgcaagaaacgtggttataagaggatccagatagctgagtttaagc
ccatgagaacataatggcacccaagccactcttgatgattctggctttga
aaatgtagctgcacgtcagaaatgaagtgcatgagtattgagtctagaaa
tcaggagagttccagggaagcaggatttaccaaatgggtgtggtccctcc
gcaacaggccagtgatacatgcttgagagagtaagtggagcactcacttc
tacatcagagactctgtacagtgtcgttgtacagaaaccacacagtgatg
aaatcaagaaataccagttagacacacagcatatttcagtcaccaccagc
atggagacttatgattaa
gaattccagggacatgataatgactgtgaagatacttgcaggcatgaagt
ctaagttataaatggacaaatatactaagggaagtcaaacaaggagtaaa
aaatgatggtgaattcactagttgtatattcaaattgagctaaagaatat
ttgacacgatctatttaatggaatgagctggaaaggtaggaagaattgat
cctcaagtatgaccaagcatgtgatattgtcactgataataactaagtta
taatgcaactctaaggagattgaccctgaatggacaatgaaagctgaaca
agaaacttataagtaatagtgttggaacatttccgtgaataacctggaaa
attatatttatataaaatgtactatatataattgtatataaatgatatat
aatttatatgtaacatataaattataatttatgtgtaatgtatatgatat
ataattgatgcatataagattatatatatgattcttgatgatttaggcat
atataccctggaattatcaagaattattcagtggtattgaacaataaggt
aagagtgtgaatattcgagatatggaaagaagaggagcaagggtgagttg
actatactttcattaacaaagataatagattttattgacaaaaaagattc
atactgaggtattttaaagagtatagatttaaaattgattagaaacatct
ttaaggagtctaaataactcctgaaacccagctctatgatacaatgacta
taagacatcattatacacaggcataagggactgataattttgtttgtcct
gttttcaactacttcataatatcaattattcttcctacccgtatcaaaag
ggctccagacgtcactgcctgaaaaattgacctgtccagttatatacttt
gatcagctcagaactgagagagggaaccaaatacacagacctagagagtt
acaaatgctagtagacaagaaacagtggcatggatcagactgatgaacat
caaaaccattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68740989_68742321
seq2: B6Ng01-321D21.b_41_1158 (reverse)

seq1  TTAATCATAATTTTAGTTAGTCATAAATAAAATTGATTAACATTTTATGG  50
                                                        
seq2  --------------------------------------------------  0

seq1  CCTCGAAGAAAAATATTTTTGTGGGATTTATTTTAGTATGCCAACAAACT  100
                                                        
seq2  --------------------------------------------------  0

seq1  TACCCAAAACCTCTGTTTGATATGCTGAAGGGAAGAAGCAACACTAAGGT  150
                                                        
seq2  --------------------------------------------------  0

seq1  TATTTCACTGTGCATCAGAGAATTTCTGAAAATAACGTTTTCTTATATCA  200
                                                ||| ||||
seq2  ------------------------------------------TTA-ATCA  7

seq1  TAAATGTTCTCATGCTGTGTGGTGACTTTAAAATATGCCTGTGTGTCTAA  250
      |||  ||   ||||||| ||||||||  | ||||||| |||||||||| |
seq2  TAA--GTCTCCATGCTG-GTGGTGAC--TGAAATATG-CTGTGTGTCT-A  50

seq1  ACTGTGTATTTCCTGGAATTTCCATCACTGTGT-GTTTCTGGTTACAACG  299
      |||| ||||||| ||  |||| ||||||||||| |||||||  |||||||
seq2  ACTG-GTATTTCTTG--ATTT-CATCACTGTGTGGTTTCTG--TACAACG  94

seq1  AACACTGGTTACAGAGTCTCTGATGGTAGAAGTGAGTGGCTCCCACTTAC  349
       ||||||  ||||||||||||||| |||||||||||| ||| ||||||||
seq2  -ACACTG--TACAGAGTCTCTGAT-GTAGAAGTGAGT-GCT-CCACTTAC  138

seq1  TCTCTCAAGCATGTTATCACTGGCCTGTTGGCGGAGGGACCACACCCATT  399
      ||||||||||||| ||||||||||||||| ||||||||||||||||||||
seq2  TCTCTCAAGCATG-TATCACTGGCCTGTT-GCGGAGGGACCACACCCATT  186

seq1  TGGTAAATCCTGCTTCCCTGGAACTCTCCTGATTTCTAGACTCAATACTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAATCCTGCTTCCCTGGAACTCTCCTGATTTCTAGACTCAATACTC  236

seq1  ATGCACTTCATTTCTGACGTGCAGCAACATTTTCAAAGCCAGAATCATCA  499
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATGCACTTCATTTCTGACGTGCAGCTACATTTTCAAAGCCAGAATCATCA  286

seq1  AGAATGGCTTGGGTGCCATTATGTTCTCCTGGGCTTAAACTCAGCTTATC  549
      ||| |||||||||||||||||||||||| |||||||||||||||| ||||
seq2  AGAGTGGCTTGGGTGCCATTATGTTCTCATGGGCTTAAACTCAGC-TATC  335

seq1  TGGATCCTCTTATAACCATGTTTCTTGCATCCTTCTTCCTCTGCCCACTT  599
      |||||||||||||||||| |||||||||||| ||||||||||||||||||
seq2  TGGATCCTCTTATAACCACGTTTCTTGCATCATTCTTCCTCTGCCCACTT  385

seq1  CCTGATTGGCTGACTTTGAGCATCAAGCACAAAATTACTAGAATCTGATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTGGCTGACTTTGAGCATCAAGCACAAAATTACTAGAATCTGATT  435

seq1  ACCTGTAACTGTGTCAGATGAAATCTATTTAACAGGTCTTACGTGTTAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAACTGTGTCAGATGAAATCTATTTAACAGGTCTTACGTGTTAAT  485

seq1  ATATATTTGAAGGTACTAAAATTATGATTGAAACTTGATGTATGTATGGT  749
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATATATTTGAAGGTACTACAATTATGATTGAAACTTGATGTATGTATGGT  535

seq1  TTAAATATCCAATTGACACTACCAAAATCATATATTTTTAGAATTTTAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATCCAATTGACACTACCAAAATCATATATTTTTAGAATTTTAAG  585

seq1  TATAACTATAAAGTTATATAATATATACATATATATAATTTTTATATATA  849
      ||||||||||||||||||||||||| ||| ||||||||||||||||||||
seq2  TATAACTATAAAGTTATATAATATACACACATATATAATTTTTATATATA  635

seq1  AAGTATAATATAAACATAATTATAAAGTTAAGTAACTGCTGTATTAATGT  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGTATAATATAAACATAATTATAAAGTTAAGTACCTGCTGTATTAATGT  685

seq1  GAGTAATTTTGTTGTTACTCTGTCAGTACTCCAAGAGTAAAGCTTCATGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAATTTTGTTGTTACTCTGTCAGTACTCCAAGAGTAAAGCTTCATGG  735

seq1  TTCCCCCATCCAGTGTGTTTGTAATTGCAGAAGCGTCACAGAATTACTGT  999
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCATCCAGAGTGTTTGTAATTGCAGAAGCGTCACAGAATTACTGT  785

seq1  TACATGTTCTCCATAGATTCTGGAGTTGAGAATTTGGTTAACAATAATTG  1049
      |||||||||||||||||||||||||||||||||| ||||| |||||||||
seq2  TACATGTTCTCCATAGATTCTGGAGTTGAGAATTCGGTTACCAATAATTG  835

seq1  AGAAGCTACAATCTTCAAAAGTAAAATTTAGCTCCTTGTTTATTTTTATA  1099
      ||||||| | ||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTTCCATCTTCAAAAGTAAAATTTAGCTCCTTGTTTATTTTTATA  885

seq1  ATTTTATAAATTATTATGTTTTATAATTTTTAACATGCTTACCTGATGAA  1149
      || ||| |||||| |||||||||||||||  ||||||||| || ||||| 
seq2  ATCTTACAAATTACTATGTTTTATAATTTCCAACATGCTTGCCCGATGAC  935

seq1  AAAGTCTCTACTTTTTAAAGAAAAATAAGAAGGAAGGTAAAATTATAAAA  1199
      ||||||| ||||||||||||||||| ||||||||| ||||||||||||||
seq2  AAAGTCTTTACTTTTTAAAGAAAAACAAGAAGGAACGTAAAATTATAAAA  985

seq1  TAGAATATTGGCTAATTTACAATAACTAAATAAGAGACATTTTAAAAATG  1249
      ||||||||||||||||||||||||| |||||||||||||||| ||||| |
seq2  TAGAATATTGGCTAATTTACAATAATTAAATAAGAGACATTTCAAAAAAG  1035

seq1  AGTATGCAGTAAAATAAGACCACAGTGAATTCCTACATTAGTTTTAAAAT  1299
      ||||||||||||||||||||||| ||||||||  ||||||||||||||||
seq2  AGTATGCAGTAAAATAAGACCACCGTGAATTCAGACATTAGTTTTAAAAT  1085

seq1  GTAAGTTCTGGTTTTTAACAAGGAAATGGAATTC  1333
      | ||| ||||| ||||||||||||||||||||||
seq2  GCAAGCTCTGG-TTTTAACAAGGAAATGGAATTC  1118

seq1: chr8_68607327_68608315
seq2: B6Ng01-321D21.g_77_1073

seq1  ACATGATAATGACTTTAAAGATACTTGCAGGCATGAAGTCTAAGTTATAA  50
      |||||||||||||| | |||||||||||||||||||||||||||||||||
seq2  ACATGATAATGACTGTGAAGATACTTGCAGGCATGAAGTCTAAGTTATAA  50

seq1  ATGGACAAATATACTAAGGGAAGTCAAACAAGGAGTAGAAAATGATGGTG  100
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATGGACAAATATACTAAGGGAAGTCAAACAAGGAGTAAAAAATGATGGTG  100

seq1  AATTCACTAATTGTATATTCAAATTGAGCTAAAGAATATTTGACACGATC  150
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACTAGTTGTATATTCAAATTGAGCTAAAGAATATTTGACACGATC  150

seq1  TATTTAATGGAATGAGCTGGAAAGGTAGGAAGAATTGATCAGTAAGTATG  200
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  TATTTAATGGAATGAGCTGGAAAGGTAGGAAGAATTGATCCTCAAGTATG  200

seq1  ACCAAGCATGTGATATTGTCACTGATAATAACTAAGTTATAATGCAACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCATGTGATATTGTCACTGATAATAACTAAGTTATAATGCAACTC  250

seq1  TAAGGAGATTGACCATGAATGGACAATGAAAGCTGAACAAGAAACTTATA  300
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAAGGAGATTGACCCTGAATGGACAATGAAAGCTGAACAAGAAACTTATA  300

seq1  AGTAATAGTGTTGGAACATTTCCAGGAATAACCTGGAAAATTATATTTAT  350
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  AGTAATAGTGTTGGAACATTTCCGTGAATAACCTGGAAAATTATATTTAT  350

seq1  ATAAAATGTACTATATATAATTGTATATAAATGATATATAATTTATATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGTACTATATATAATTGTATATAAATGATATATAATTTATATGT  400

seq1  AACATATAAATTATAATTTATATGTAATGTATATGATATATAATTAATGT  450
      ||||||||||||||||||||| ||||||||||||||||||||||| ||| 
seq2  AACATATAAATTATAATTTATGTGTAATGTATATGATATATAATTGATGC  450

seq1  ATATAAAATTATATATATAATTCTTGATGATTTAAGCATATATACCCTAA  500
      |||||| ||||||||||| ||||||||||||||| |||||||||||||  
seq2  ATATAAGATTATATATATGATTCTTGATGATTTAGGCATATATACCCTGG  500

seq1  AATTATCAAGAATTATTCAGTGGTATTGAACAATAAGGTAAGAGTGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCAAGAATTATTCAGTGGTATTGAACAATAAGGTAAGAGTGTGAA  550

seq1  TATTCAAGAAATGGAAAGAAGAGGAACAAGGGTGAGTTGACTATACTTTC  600
      ||||| ||| ||||||||||||||| ||||||||||||||||||||||||
seq2  TATTCGAGATATGGAAAGAAGAGGAGCAAGGGTGAGTTGACTATACTTTC  600

seq1  ATTAACAAAGATAATAGATTTTATTGACAAAAAAAATTCATACTGAGGTA  650
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATTAACAAAGATAATAGATTTTATTGACAAAAAAGATTCATACTGAGGTA  650

seq1  TTTTAAAGAGTATAGATTTAAAATTAATTAGAAACATCTTTAAGGAGTCT  700
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTTAAAGAGTATAGATTTAAAATTGATTAGAAACATCTTTAAGGAGTCT  700

seq1  AAATAACTCCTGAAACCCAGCTCTATGATACAATGACTATAAGACATCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTCCTGAAACCCAGCTCTATGATACAATGACTATAAGACATCAT  750

seq1  TATACACAGGCATAAGGGACTGATAATTTTGTTTGTCTTGTTTTCAACTA  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TATACACAGGCATAAGGGACTGATAATTTTGTTTGTCCTGTTTTCAACTA  800

seq1  CTTCAGAAAATTAATTATTTTTCATA-AGGTATC-AAAGGGCTCAAGAGG  848
      ||||| || || ||||||| ||| ||   ||||| ||||||||| ||| |
seq2  CTTCATAATATCAATTATTCTTCCTACCCGTATCAAAAGGGCTCCAGACG  850

seq1  TCAGTGTCAGAAAAATTGACATGCCAATTT---TTCTTTAATCAATTTAG  895
      ||| || | ||||||||||| || | | ||   | |||| ||||  | ||
seq2  TCACTGCCTGAAAAATTGACCTGTCCAGTTATATACTTTGATCAGCTCAG  900

seq1  AGCTGAAGAGAGGGAACCAAA-ACACAAACCTAGAGAAGTTACAAAATCT  944
      | ||| ||||||||||||||| ||||| |||||||| |||||||||  ||
seq2  AACTG-AGAGAGGGAACCAAATACACAGACCTAGAG-AGTTACAAATGCT  948

seq1  AG-AGAGAAAAAAAAGTGGCATGGAT-AGACTGTTGA--ATAAAAACCA  989
      || ||| || ||| |||||||||||| |||||| |||  || |||||||
seq2  AGTAGACAAGAAACAGTGGCATGGATCAGACTGATGAACATCAAAACCA  997