BAC Information

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BAC

Clone NameB6Ng01-322F08
Chromosome8 (Build37)
Map Location 73,007,101 - 73,140,481
singlet/doubletdoublet
Overlap geneTmem59l, Crlf1, 2810428I15Rik, Uba52, Fkbp8, Ell, Isyna1, Ssbp4
Upstream geneEG665578, LOC622336, LOC100041482, LOC673968, AI449175, EG636741, 1200003I07Rik, D330038O06Rik, Atp13a1, Gmip, Edg4, Pbx4, Cilp2, BC028663, Ndufa13, Tssk6, Gatad2a, LOC665649, 9130404D08Rik, Sf4, Tm6sf2, Hapln4, Ncan, Rfxank, 2310073E15Rik, 2310045N01Rik, Mef2b, Tmem161a, Slc25a42, Armc6, Sfrs14, Homer3, Ddx49, Cope, Lass1, Upf1, Comp, Crtc1, Klhl26
Downstream geneLrrc25, Gdf15, Pgpep1, Lsm4, Jund1, 2410018E23Rik, LOC100041434, Pde4c, Rab3a, BC051227, Ifi30, Pik3r2, LOC100041971, Mast3, Il12rb1, Arrdc2, Kcnn1, LOC100042011, Ccdc124, Slc5a5, Rpl18a, Snora68, Mtap1s, LOC100042057, LOC665858, LOC384645, LOC100041583, EG621377, 2410004L22Rik, Myo9b, 2010315L10Rik, Ocel1, Nr2f6, Ushbp1, 5430437P03Rik, Ankrd41, Abhd8, Mrpl34, 1500034J01Rik, Tmem16h, Gtpbp3, Plvap, LOC665928, Bst2, 1110012M11Rik, BC033932, Txnl6, Slc27a1, Pgls, Bcnp1, Glt25d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322F08.bB6Ng01-322F08.g
ACCGA111199GA111200
length5921,032
definitionB6Ng01-322F08.b B6Ng01-322F08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,139,884 - 73,140,481)(73,007,101 - 73,008,133)
sequence
cacaaggtatctaagaagagatagctagcaacacatagctaggagttgtc
aaggagtcttaaaacctgtccctagggctgcagcgatggcttagcggtta
agagcatcgactactcttctgaaggtcctgtgttcaaatcccagcaacca
catggtggctcacaaccatctgtaaggagatctgatgtcctcttctggaa
tgtctgaagacatctacagtgtacttacatataataaataaatctttaaa
aaacaaacaaacaaacaaacaaacaaaaactgtccttacttctccaagct
cctaaccctcacaggtgcttcgtggaagtttctgcagcaggctattggaa
aggggctgtagggaccagctaggggagggcacatagctgataagtgcctg
gcaggcagcaggagctaagaccctgaggcccaaggagcagctgggtaaga
ggaagctgaagggggaactagaagtgtgggcctcactctcacactggtgg
aaatgggtaatccagagccagcaagtcccggggccagtggaaaccaggct
ggagtatgctcaggggaagggaggaggttgggggtatgaaga
gaattcatgctactgaggatacactccaaaagtcattgcaagagggccta
atggcacaccccacttacttcgctttcagactgagggaggaatattgaca
gttcttggccagcttggcctacataaccaaaaaacaaagcccgcataata
aaggcaagaggtgcgactcagtggctgaaagacatcttagaatcccccag
tgagatgctggaggcgtggctcaggggtggagccctgcctagaaccccca
gtaagaggctgggggcatggctcgtgggtgtagccttgcctagaaccccc
tagtgagggactcatgcctaggatcttcttactccacagggggctctaag
tctgttagcagtgggtcagagctctgcccctaagagaaaaaagggatgcc
agataatcacaaaattatcagcagatttcaagggggtaacctactgattt
tacaggagggccatcaggtccgtaaagggcacaacctcactcaggctaca
caggtgggacgggctttgtcagggacattcactcactaggtttgtgacct
gtttgtgtccctcttgctctttaagaacttcctgggcttctccagagttg
gaagaacccaacccacccagcccaccctagggcaggcacagactgaagca
ggctcagccaccctattttttattcactttatttaaaggtttatatctcc
ttatctcctcccaggaaggagttctcaccactctgtccttgtggggttgg
gtttccagagacaaagggaaggaaccttagcagaggggagcccctgagac
ctcagccccacagtgaggacacagagaaagaaaaagcaacacagatgagg
ttccatactcagaacatgtgaggaatgtcaataagccagcccctgggaaa
gcaagatggggggccaaggaggtcagaccctcctctctcgtcacttaagg
tccacttgtctcaagggactaagggatgtgctggcagagagggaagggaa
gactggggggtggataagctcaaagttggtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_73139884_73140481
seq2: B6Ng01-322F08.b_43_640 (reverse)

seq1  TCTTCATACCCCCAACCTCCTCCCTTCCCCTGAGCATACTCCAGCCTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATACCCCCAACCTCCTCCCTTCCCCTGAGCATACTCCAGCCTGGT  50

seq1  TTCCACTGGCCCCGGGACTTGCTGGCTCTGGATTACCCATTTCCACCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTGGCCCCGGGACTTGCTGGCTCTGGATTACCCATTTCCACCAGT  100

seq1  GTGAGAGTGAGGCCCACACTTCTAGTTCCCCCTTCAGCTTCCTCTTACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGTGAGGCCCACACTTCTAGTTCCCCCTTCAGCTTCCTCTTACCC  150

seq1  AGCTGCTCCTTGGGCCTCAGGGTCTTAGCTCCTGCTGCCTGCCAGGCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTCCTTGGGCCTCAGGGTCTTAGCTCCTGCTGCCTGCCAGGCACT  200

seq1  TATCAGCTATGTGCCCTCCCCTAGCTGGTCCCTACAGCCCCTTTCCAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCTATGTGCCCTCCCCTAGCTGGTCCCTACAGCCCCTTTCCAATA  250

seq1  GCCTGCTGCAGAAACTTCCACGAAGCACCTGTGAGGGTTAGGAGCTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTGCAGAAACTTCCACGAAGCACCTGTGAGGGTTAGGAGCTTGGA  300

seq1  GAAGTAAGGACAGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAAGGACAGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTAAAGA  350

seq1  TTTATTTATTATATGTAAGTACACTGTAGATGTCTTCAGACATTCCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTATATGTAAGTACACTGTAGATGTCTTCAGACATTCCAGAA  400

seq1  GAGGACATCAGATCTCCTTACAGATGGTTGTGAGCCACCATGTGGTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACATCAGATCTCCTTACAGATGGTTGTGAGCCACCATGTGGTTGCT  450

seq1  GGGATTTGAACACAGGACCTTCAGAAGAGTAGTCGATGCTCTTAACCGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTGAACACAGGACCTTCAGAAGAGTAGTCGATGCTCTTAACCGCT  500

seq1  AAGCCATCGCTGCAGCCCTAGGGACAGGTTTTAAGACTCCTTGACAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATCGCTGCAGCCCTAGGGACAGGTTTTAAGACTCCTTGACAACTC  550

seq1  CTAGCTATGTGTTGCTAGCTATCTCTTCTTAGATACCTTGTGGAATTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTATGTGTTGCTAGCTATCTCTTCTTAGATACCTTGTGGAATTC  598

seq1: chr8_73007101_73008133
seq2: B6Ng01-322F08.g_67_1098

seq1  GAATTCATGCTACTGAGGATACACTCCAAAAGTCATTGCAAGAGGGCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCTACTGAGGATACACTCCAAAAGTCATTGCAAGAGGGCCTA  50

seq1  ATGGCACACCCCACTTACTTCGCTTTCAGACTGAGGGAGGAATATTGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACACCCCACTTACTTCGCTTTCAGACTGAGGGAGGAATATTGACA  100

seq1  GTTCTTGGCCAGCTTGGCCTACATAACCAAAAAACAAAGCCCGCATAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGGCCAGCTTGGCCTACATAACCAAAAAACAAAGCCCGCATAATA  150

seq1  AAGGCAAGAGGTGCGACTCAGTGGCTGAAAGACATCTTAGAATCCCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAGAGGTGCGACTCAGTGGCTGAAAGACATCTTAGAATCCCCCAG  200

seq1  TGAGATGCTGGAGGCGTGGCTCAGGGGTGGAGCCCTGCCTAGAACCCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGCTGGAGGCGTGGCTCAGGGGTGGAGCCCTGCCTAGAACCCCCA  250

seq1  GTAAGAGGCTGGGGGCATGGCTCGTGGGTGTAGCCTTGCCTAGAACCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGGCTGGGGGCATGGCTCGTGGGTGTAGCCTTGCCTAGAACCCCC  300

seq1  TAGTGAGGGACTCATGCCTAGGATCTTCTTACTCCACAGGGGGCTCTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGGGACTCATGCCTAGGATCTTCTTACTCCACAGGGGGCTCTAAG  350

seq1  TCTGTTAGCAGTGGGTCAGAGCTCTGCCCCTAAGAGAAAAAAGGGATGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTAGCAGTGGGTCAGAGCTCTGCCCCTAAGAGAAAAAAGGGATGCC  400

seq1  AGATAATCACAAAATTATCAGCAGATTTCAAGGGGGTAACCTACTGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATCACAAAATTATCAGCAGATTTCAAGGGGGTAACCTACTGATTT  450

seq1  TACAGGAGGGCCATCAGGTCCGTAAAGGGCACAACCTCACTCAGGCTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAGGGCCATCAGGTCCGTAAAGGGCACAACCTCACTCAGGCTACA  500

seq1  CAGGTGGGACGGGCTTTGTCAGGGACATTCACTCACTAGGTTTGTGACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGGACGGGCTTTGTCAGGGACATTCACTCACTAGGTTTGTGACCT  550

seq1  GTTTGTGTCCCTCTTGCTCTTTAAGAACTTCCTGGGCTTCTCCAGAGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGTCCCTCTTGCTCTTTAAGAACTTCCTGGGCTTCTCCAGAGTTG  600

seq1  GAAGAACCCAACCCACCCAGCCCACCCTAGGGCAGGCACAGACTGAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACCCAACCCACCCAGCCCACCCTAGGGCAGGCACAGACTGAAGCA  650

seq1  GGCTCAGCCACCCTATTTTTTATTCACTTTATTTAAAGGTTTATATCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGCCACCCTATTTTTTATTCACTTTATTTAAAGGTTTATATCTCC  700

seq1  TTATCTCCTCCCAGGAAGGAGTTCTCACCACTCTGTCCTTGTGGGGTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCCTCCCAGGAAGGAGTTCTCACCACTCTGTCCTTGTGGGGTTGG  750

seq1  GTTTCCAGAGACAAAGGGAAGGAACCTTAGCAGAGGGGAGCCCCTGAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAGAGACAAAGGGAAGGAACCTTAGCAGAGGGGAGCCCCTGAGAC  800

seq1  CTCAGCCCCACAGTGAGGACACAGAGAAAGAAAAAGCAACACAGATGAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCCCACAGTGAGGACACAGAGAAAGAAAAAGCAACACAGATGAGG  850

seq1  TTCCATACTCAGAACATGTGAGGAATGTCAATAAGCCAGCCCCTGGGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATACTCAGAACATGTGAGGAATGTCAATAAGCCAGCCCCTGGGAAA  900

seq1  GCAAGATGGGGGGCCAAGGAGGCCAGACCCTCCTCTCTCGGCCACTT-AG  949
      |||||||||||||||||||||| |||||||||||||||| | ||||| ||
seq2  GCAAGATGGGGGGCCAAGGAGGTCAGACCCTCCTCTCTC-GTCACTTAAG  949

seq1  GTCCACTTGTCTCAAGGGGACTAAGGGATGTGCTGGCAAGAGAGGG-AGG  998
      ||||||||||||||| ||||||||||||||||||||| |||||||| |||
seq2  GTCCACTTGTCTCAA-GGGACTAAGGGATGTGCTGGC-AGAGAGGGAAGG  997

seq1  GAAGACTGGGGGGTGGATAAGCCCAAGGTTGGTCC  1033
      |||||||||||||||||||||| ||| ||||||||
seq2  GAAGACTGGGGGGTGGATAAGCTCAAAGTTGGTCC  1032