BAC Information

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BAC

Clone NameB6Ng01-323P13
Chromosome8 (Build37)
Map Location 58,557,272 - 58,694,840
singlet/doubletdoublet
Overlap geneGlra3
Upstream geneGm392, LOC100040212, Gm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356, LOC664916, Adam29, LOC664812
Downstream geneHpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433, LOC654355
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323P13.bB6Ng01-323P13.g
ACCGA112409GA112410
length9551,113
definitionB6Ng01-323P13.b B6Ng01-323P13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,694,326 - 58,694,840)(58,557,272 - 58,558,410)
sequence
gaattctgtgggttttatgtggaggcgccacaaatctatttccattaagt
gaaacttatgcccttgatctccatgaagcaaaatgtcagtggtcagttcg
gttagctacaattcaatgaaagtactgctagttaaatacccaaccagaag
aataaacattaagatatgatcaaatttataacagatattcaaaagtatta
taaatgtcctagttgcattcaatagcagaaatcctgcaaacacaagctag
gacatatagtccttaggagcttcctggaacaattcctttctgacttgtgc
ttttgtttttttgtttttttgtttttgtttttgttttggttttttttttt
ctgtccaaaaatgtctcctatattttcagttttaaaaatgctgtgtgtgt
agcatttctttatcttacaagtatttgatcttgagtttattcatcttgta
cttctacatctttgtccgtcactgagtgaaatcagggcaggaactgaatc
agagaccatagatgtaccacataatggattgttttccatggcttgtttag
ctatgttcattgtgctacctatccaaccgacaactgtgccctctcacatc
aatcattaaccaagaaaatgctccccttgctgaggtatgcctgtatgcca
atatgatggaggaaattcctcaattgagattccctaaaatggaaattttt
ggtttctttggagactcagtgatgtcatgtgatgtttttttctggaaact
ctcttatgagaggatgcttttactaaggcagacatgtgggagaatgtttt
gctgagaacagacaggtagtatttctggaagcttcctggaaaaagaacat
gtgatgttttgctagagcagatgcttgagagaacatgtgatgtttggaag
aagtataaatataactcagtagtaagtgatcaataacgctgtggtggcat
agctt

gaattcagtagggattgtctagagacatcccctgaatcagtatgatggtc
agtagattagaggaaatttgataaaatggcataggcttcagaaaggttag
agggagttgaaaatcaaagtatttgtatgaggtttctcttcagttattct
gagacttattctcactgcccattggcctgagccaacacagacgaccatat
aatctacctgtggcatgagatgtctacgcgaatagataacaatatttata
ggtatattttttggttgactaagtggaaaaatagacagagacaagataac
acatttttttgttttgatttactattttgtgttacttggaaatagtctag
actttctagatggtcccatagagtcccataaactcagagctagcaatttc
aattcttagctcatcaaccaaggggtttaaaataaagaacctcaatgtcc
tgttgcttgggaaaataaaaagtatcttagaacaaagactgaaggcaaat
tcagtggagataagtgttccttagaggttatggcttaaattgtttccctg
ttgatatggcaacaaatgagaacaccgaagaacattagtaccaatagaca
tgaccatacattttacccatctgagagtctattcgatgctagagcccagc
cacagaagttcacatggtctataggaaggtaagaaaacagaaacaaacag
caacagcaaaagtctacaccccatacatccaagaagctcattgctctcta
cacgtgtgaagggacccgatcttcttcctcttaggagaggattactttta
aaaacagaacaattcgaagaaaatatttaagcgaatgtgcacatctagta
ttactaactgaaagattttattaagtggatagcttttaaggaactataat
ccaatttccaataatttccaaattaaagttaattacaattattagtattc
aaattgcaacatgcatactaaatttgacttgtatcactgtctatgatctg
tcgttaaactatctttttttctttttccaatgagaaaataacatttcttt
cttttaatttattggtatttcctaattacattccatgcttcaacgtacag
atctccattggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58694326_58694840
seq2: B6Ng01-323P13.b_49_563 (reverse)

seq1  ACATCTATGGTCTCTGATTCAGTTCCTGCCCTGATTTCACTCAGTGACGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTATGGTCTCTGATTCAGTTCCTGCCCTGATTTCACTCAGTGACGG  50

seq1  ACAAAGATGTAGAAGTACAAGATGAATAAACTCAAGATCAAATACTTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGATGTAGAAGTACAAGATGAATAAACTCAAGATCAAATACTTGTA  100

seq1  AGATAAAGAAATGCTACACACACAGCATTTTTAAAACTGAAAATATAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGAAATGCTACACACACAGCATTTTTAAAACTGAAAATATAGGA  150

seq1  GACATTTTTGGACAGAAAAAAAAAAACCAAAACAAAAACAAAAACAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTTGGACAGAAAAAAAAAAACCAAAACAAAAACAAAAACAAAAA  200

seq1  AACAAAAAAACAAAAGCACAAGTCAGAAAGGAATTGTTCCAGGAAGCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAACAAAAGCACAAGTCAGAAAGGAATTGTTCCAGGAAGCTCC  250

seq1  TAAGGACTATATGTCCTAGCTTGTGTTTGCAGGATTTCTGCTATTGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACTATATGTCCTAGCTTGTGTTTGCAGGATTTCTGCTATTGAATG  300

seq1  CAACTAGGACATTTATAATACTTTTGAATATCTGTTATAAATTTGATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGGACATTTATAATACTTTTGAATATCTGTTATAAATTTGATCAT  350

seq1  ATCTTAATGTTTATTCTTCTGGTTGGGTATTTAACTAGCAGTACTTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAATGTTTATTCTTCTGGTTGGGTATTTAACTAGCAGTACTTTCAT  400

seq1  TGAATTGTAGCTAACCGAACTGACCACTGACATTTTGCTTCATGGAGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGTAGCTAACCGAACTGACCACTGACATTTTGCTTCATGGAGATC  450

seq1  AAGGGCATAAGTTTCACTTAATGGAAATAGATTTGTGGCGCCTCCACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCATAAGTTTCACTTAATGGAAATAGATTTGTGGCGCCTCCACATA  500

seq1  AAACCCACAGAATTC  515
      |||||||||||||||
seq2  AAACCCACAGAATTC  515


seq1: chr8_58557272_58558410
seq2: B6Ng01-323P13.g_70_1182

seq1  GAATTCAGTAGGGATTGTCTAGAGACATCCCCTGAATCAGTATGATGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGGGATTGTCTAGAGACATCCCCTGAATCAGTATGATGGTC  50

seq1  AGTAGATTAGAGGAAATTTGATAAAATGGCATAGGCTTCAGAAAGGTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATTAGAGGAAATTTGATAAAATGGCATAGGCTTCAGAAAGGTTAG  100

seq1  AGGGAGTTGAAAATCAAAGTATTTGTATGAGGTTTCTCTTCAGTTATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTTGAAAATCAAAGTATTTGTATGAGGTTTCTCTTCAGTTATTCT  150

seq1  GAGACTTATTCTCACTGCCCATTGGCCTGAGCCAACACAGACGACCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTATTCTCACTGCCCATTGGCCTGAGCCAACACAGACGACCATAT  200

seq1  AATCTACCTGTGGCATGAGATGTCTACGCGAATAGATAACAATATTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACCTGTGGCATGAGATGTCTACGCGAATAGATAACAATATTTATA  250

seq1  GGTATATTTTTTGGTTGACTAAGTGGAAAAATAGACAGAGACAAGATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATTTTTTGGTTGACTAAGTGGAAAAATAGACAGAGACAAGATAAC  300

seq1  ACATTTTTTTGTTTTGATTTACTATTTTGTGTTACTTGGAAATAGTCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTTTGTTTTGATTTACTATTTTGTGTTACTTGGAAATAGTCTAG  350

seq1  ACTTTCTAGATGGTCCCATAGAGTCCCATAAACTCAGAGCTAGCAATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTAGATGGTCCCATAGAGTCCCATAAACTCAGAGCTAGCAATTTC  400

seq1  AATTCTTAGCTCATCAACCAAGGGGTTTAAAATAAAGAACCTCAATGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTAGCTCATCAACCAAGGGGTTTAAAATAAAGAACCTCAATGTCC  450

seq1  TGTTGCTTGGGAAAATAAAAAGTATCTTAGAACAAAGACTGAAGGCAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTTGGGAAAATAAAAAGTATCTTAGAACAAAGACTGAAGGCAAAT  500

seq1  TCAGTGGAGATAAGTGTTCCTTAGAGGTTATGGCTTAAATTGTTTCCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGAGATAAGTGTTCCTTAGAGGTTATGGCTTAAATTGTTTCCCTG  550

seq1  TTGATATGGCAACAAATGAGAACACCGAAGAACATTAGTACCAATAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATGGCAACAAATGAGAACACCGAAGAACATTAGTACCAATAGACA  600

seq1  TGACCATACATTTTACCCATCTGAGAGTCTATTCGATGCTAGAGCCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATACATTTTACCCATCTGAGAGTCTATTCGATGCTAGAGCCCAGC  650

seq1  CACAGAAGTTCACATGGTCTATAGGAAGGTAAGAAAACAGAAACAAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGTTCACATGGTCTATAGGAAGGTAAGAAAACAGAAACAAACAG  700

seq1  CAACAGCAAAAGTCTACACCCCATACATCCAAGAAGCTCATTGCTCTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCAAAAGTCTACACCCCATACATCCAAGAAGCTCATTGCTCTCTA  750

seq1  CACGTGTGAAGGGACCCGATCTTCTTCCTCTTAGGAGAGGATTACTTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGTGAAGGGACCCGATCTTCTTCCTCTTAGGAGAGGATTACTTTTA  800

seq1  AAAACAGAACAATTCGAAGAAAATATTTAAGCGAATGTGCACATCTAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAACAATTCGAAGAAAATATTTAAGCGAATGTGCACATCTAGTA  850

seq1  TTACTAACTGAAAGATTTTATTAAGTGGATAGCTTTTAAGGAACTATAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAACTGAAAGATTTTATTAAGTGGATAGCTTTTAAGGAACTATAAT  900

seq1  CCAATTTCCAATAATTTCCAAAATTAAAGTTAAATTACAATTATTAGTAT  950
      ||||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  CCAATTTCCAATAATTTCC-AAATTAAAGTT-AATTACAATTATTAGTAT  948

seq1  TCAAAATTGCAACATGCATTACTAAATTTGAACTTGTTATCACTGTCTAT  1000
      || ||||||||||||||| ||||||||||| ||||| |||||||||||| 
seq2  TC-AAATTGCAACATGCA-TACTAAATTTG-ACTTG-TATCACTGTCTA-  993

seq1  TGATTCTGTCGGTTAAACTATCCTTTTTTTCTTTTTCCATTGAGAAAAAT  1050
      ||| |||||| |||||||||| ||||||||||||||||| |||| |||||
seq2  TGA-TCTGTC-GTTAAACTAT-CTTTTTTTCTTTTTCCAATGAG-AAAAT  1039

seq1  AACATTTTCTTTTTCCTTTTTATTTTAATTGGGTATTTTCTTTATTTACA  1100
      |||| |||||||   ||||| ||||  ||| ||||||| |  || |||||
seq2  AACA-TTTCTTT---CTTTTAATTT--ATT-GGTATTTCC--TAATTACA  1080

seq1  TTTCAAATGCTTCCCACTTTCCAGATCTCCCCTTTGGAA  1139
      || |  ||||||  ||   | |||||||  || ||||||
seq2  TTCC--ATGCTT--CAACGTACAGATCT--CCATTGGAA  1113


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