BAC Information

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BAC

Clone NameB6Ng01-324L07
Chromosome8 (Build37)
Map Location 61,328,322 - 61,483,028
singlet/doubletdoublet
Overlap gene4930431L04Rik, BC030500
Upstream genenone
Downstream geneLOC665116, LOC436042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324L07.bB6Ng01-324L07.g
ACCGA112951GA112952
length1,123931
definitionB6Ng01-324L07.b B6Ng01-324L07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,328,322 - 61,329,440)(61,482,104 - 61,483,028)
sequence
gaattctggaatcacctttttctacttattcatataatcaatatttctat
atttccttcaatcatataaaaaaggcttctgttgttttcatatttaaata
actgaaatggagctgagaagatagctcatttggtagtctttgctttgcaa
gggggaggactggagttgaatgctcaaaagtatgtaaatttccaattgcc
ttgcataagcttatattaacagtgcaggaggggtggagacagagacctgg
ggtttgttgaccagccaggctagccaacatgctcaacttcagtcactaag
agactttgtgttgaataacttgcttgtagcttctgaataactacaatcag
ggttgccttttagtcttcatatactagaaaacgtactcatacacactggt
acataatacatactggtatatacacaacaaaatctataaaatttaaaaat
aaaattactgaaacataactttattttttatttgtttcaatgaattttgt
tcaaacgtgttccatgatgtttgacccttgagtttttgtccatgacctta
tcattttgaccaaaatatgtaacaatgatgtgtaataatataattttata
tataacatttcatcactcatgaaacacttggatttctctctcttaaccta
cctagtcccctatatgtatgtctttctatctttggccatatgagagccaa
ttatggcataccctatagatttttgatgattaagcttgcttttctcactc
caatctcaaaagattatctgttgtttaagattaaagaatataaaaacaaa
tgcctcatttcttctctaagacttataagaaggctgaacaggacaacaga
tgtttgaaatttccacaggattttaatagcaagagatatgccaagagata
tattctgtcacttttgtttctagatatctgtgtaaactaaagcaaactgt
atatacgaagacctgaagatacagttttatctagatctacttgatgcaga
aacttatgcaaatccattcaaaggtattttagaagaattcattttatgcc
attgcttacataggaaaaaaatatgcactagaattgttcaatatatgcac
ttcattttccttgagttggatta

gaattcatgaacataatcagagaaagaaaatagcgtagaatacctctatt
tgatttatagtagctatagatcccaaagattcacatgcatgtcagaaaaa
caaagaaattactacccaaaatagtggtagaggggctggagatgtagctc
actagtgaagggtttatttagcatgcacaaagcccagggtttggtccata
gaaccgttataaaatatatctgtagatggaaaacctgcagtgttttaagc
agaagagaggttagatctgtttgtaaagaaaaaagaaaatgttggcatca
ttttgttgtgttcttgaagtagttaggttcaaagggcaaaaagtagtatt
taaatgaaatatattttgaatggggaccaaaggaagttaaaacattggta
tatattgtgtagaaaccagaaaatatttagaatacctttacaagtctctt
cacccctctctacattaaaagaatttagtggtcttacaaaataggtttag
ttcccagcactcaaaatgagcgccttaccaccaactgttactctagtacc
aggatatctgttgcccttttctggattctacaggtatttatatgcataat
ctctctctctctctctctctgactctgtctctctttatctgaatttctct
gtctctgtctctcacatctctctctcacacatacacaaacacatacaaat
aaatataaaaacaagcagggcagggggagggtatagggggctttggggat
agcatgttgaaatgcacatgaagaaaatatgtaatacaaataataaaaaa
ataatatgtaaaaactatattttccagtgttattaattagtgtataatat
ccgaaaatgttggtgattttcaacagaagtgtaaatattgtatcagagtt
ttacccttaaaattgtctttttctaataacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61328322_61329440
seq2: B6Ng01-324L07.b_49_1171

seq1  GAATTCTGGAATCACCTTTTTCTACTTATTCATATAATCAATATTTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAATCACCTTTTTCTACTTATTCATATAATCAATATTTCTAT  50

seq1  ATTTCCTTCAATCATATAAAAAAGGCTTCTGTTGTTTTCATATTTAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTCAATCATATAAAAAAGGCTTCTGTTGTTTTCATATTTAAATA  100

seq1  ACTGAAATGGAGCTGAGAAGATAGCTCATTTGGTAGTCTTTGCTTTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATGGAGCTGAGAAGATAGCTCATTTGGTAGTCTTTGCTTTGCAA  150

seq1  GGGGGAGGACTGGAGTTGAATGCTCAAAAGTATGTAAATTTCCAATTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGGACTGGAGTTGAATGCTCAAAAGTATGTAAATTTCCAATTGCC  200

seq1  TTGCATAAGCTTATATTAACAGTGCAGGAGGGGTGGAGACAGAGACCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATAAGCTTATATTAACAGTGCAGGAGGGGTGGAGACAGAGACCTGG  250

seq1  GGTTTGTTGACCAGCCAGGCTAGCCAACATGCTCAACTTCAGTCACTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTTGACCAGCCAGGCTAGCCAACATGCTCAACTTCAGTCACTAAG  300

seq1  AGACTTTGTGTTGAATAACTTGCTTGTAGCTTCTGAATAACTACAATCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTGTGTTGAATAACTTGCTTGTAGCTTCTGAATAACTACAATCAG  350

seq1  GGTTGCCTTTTAGTCTTCATATACTAGAAAACGTACTCATACACACTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCCTTTTAGTCTTCATATACTAGAAAACGTACTCATACACACTGGT  400

seq1  ACATAATACATACTGGTATATACACAACAAAATCTATAAAATTTAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATACATACTGGTATATACACAACAAAATCTATAAAATTTAAAAAT  450

seq1  AAAATTACTGAAACATAACTTTATTTTTTATTTGTTTCAATGAATTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACTGAAACATAACTTTATTTTTTATTTGTTTCAATGAATTTTGT  500

seq1  TCAAACGTGTTCCATGATGTTTGACCCTTGAGTTTTTGTCCATGACCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACGTGTTCCATGATGTTTGACCCTTGAGTTTTTGTCCATGACCTTA  550

seq1  TCATTTTGACCAAAATATGTAACAATGATGTGTAATAATATAATTTTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGACCAAAATATGTAACAATGATGTGTAATAATATAATTTTATA  600

seq1  TATAACATTTCATCACTCATGAAACACTTGGATTTCTCTCTCTTAACCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACATTTCATCACTCATGAAACACTTGGATTTCTCTCTCTTAACCTA  650

seq1  CCTAGTCCCCTATATGTATGTCTTTCTATCTTTGGCCATATGAGAGCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTCCCCTATATGTATGTCTTTCTATCTTTGGCCATATGAGAGCCAA  700

seq1  TTATGGCATACCCTATAGATTTTTGATGATTAAGCTTGCTTTTCTCACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCATACCCTATAGATTTTTGATGATTAAGCTTGCTTTTCTCACTC  750

seq1  CAATCTCAAAAGATTATCTGTTGTTTAAGATTAAAGAATATAAAAACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCAAAAGATTATCTGTTGTTTAAGATTAAAGAATATAAAAACAAA  800

seq1  TGCCTCATTTCTTCTCTAAGACTTATAAGAAGGCTGAACAGGACAACAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCATTTCTTCTCTAAGACTTATAAGAAGGCTGAACAGGACAACAGA  850

seq1  TGTTTGAAATTTCCACAGGATTTTAATAGCAAGAGATATGCCAAGAGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAAATTTCCACAGGATTTTAATAGCAAGAGATATGCCAAGAGATA  900

seq1  TATTCTGTCACTTTTGTTTCTAGATATCTGTGTAAACTAAAGCAAACTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TATTCTGTCACTTTTGTTTCTAGATATCTGTGTAAACTAAAGCAAACTG-  949

seq1  TATATACGAAGACCTGAAGATACAGTTTTATCTAGATCTACTTGATGCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACGAAGACCTGAAGATACAGTTTTATCTAGATCTACTTGATGCAG  999

seq1  AAACTTATGCAAATCCATTCAAAGGTATTTTAG-AGAATTCAATTTTATG  1049
      ||||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  AAACTTATGCAAATCCATTCAAAGGTATTTTAGAAGAATTC-ATTTTATG  1048

seq1  CCATTGC-TACATAGGAAAAAAATAATGCACTAGA--TG-TCAATATATG  1095
      ||||||| |||||||||||||||| ||||||||||  || ||||||||||
seq2  CCATTGCTTACATAGGAAAAAAAT-ATGCACTAGAATTGTTCAATATATG  1097

seq1  CACTTCATTTT-CTTGAGTT-GATTA  1119
      ||||||||||| |||||||| |||||
seq2  CACTTCATTTTCCTTGAGTTGGATTA  1123


seq1: chr8_61482104_61483028
seq2: B6Ng01-324L07.g_67_997 (reverse)

seq1  CGTTA-TAGAAAAAGAC-ACTTTAAGGTTAAAACTCTGATACATAATTTA  48
      ||||| ||||||||||| | ||||||| |||||||||||||||  |||||
seq2  CGTTATTAGAAAAAGACAATTTTAAGGGTAAAACTCTGATACAATATTTA  50

seq1  CACTTCTGTTGAAAATCACCAACA-TTTAGGATATTATACACT-ATTAAT  96
      |||||||||||||||||||||||| ||| |||||||||||||| ||||||
seq2  CACTTCTGTTGAAAATCACCAACATTTTCGGATATTATACACTAATTAAT  100

seq1  AACACTTGAAAATATAGTTTTTACATATTA-TTTTTTATTATTTGTATTA  145
      |||||| ||||||||||||||||||||||| |||||||||||||||||||
seq2  AACACTGGAAAATATAGTTTTTACATATTATTTTTTTATTATTTGTATTA  150

seq1  CATATTTTCTTCATGTGCATTTC-ACATGCTATCCCCAAAGCCCCCTATA  194
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CATATTTTCTTCATGTGCATTTCAACATGCTATCCCCAAAGCCCCCTATA  200

seq1  CCCTCCCCCTGCCCTGCTTGTTTTTATATTTATTTGTATGTGTTTGTGTA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCTGCCCTGCTTGTTTTTATATTTATTTGTATGTGTTTGTGTA  250

seq1  TGTGTGAGAGAGAGATGTGAGAGACAGAGACAGAGAAATTCAGATAAAGA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAGAGAGAGATGTGAGAGACAGAGACAGAGAAATTCAGATAAAGA  300

seq1  GAGACAGAGTCAGAGAGAGAGAGAGAGAGAGATTATGCATATAAATACCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGTCAGAGAGAGAGAGAGAGAGAGATTATGCATATAAATACCT  350

seq1  GTAGAATCCAGAAAAGGGCAACAGATATCCTGGTACTAGAGTAACAGTTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAATCCAGAAAAGGGCAACAGATATCCTGGTACTAGAGTAACAGTTG  400

seq1  GTGGTAAGGCGCTCATTTTGAGTGCTGGGAACTAAACCTATTTTGTAAGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAAGGCGCTCATTTTGAGTGCTGGGAACTAAACCTATTTTGTAAGA  450

seq1  CCACTAAATTCTTTTAATGTAGAGAGGGGTGAAGAGACTTGTAAAGGTAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAAATTCTTTTAATGTAGAGAGGGGTGAAGAGACTTGTAAAGGTAT  500

seq1  TCTAAATATTTTCTGGTTTCTACACAATATATACCAATGTTTTAACTTCC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATATTTTCTGGTTTCTACACAATATATACCAATGTTTTAACTTCC  550

seq1  TTTGGTCCCCATTCAAAATATATTTCATTTAAATACTACTTTTTGCCCTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCCCCATTCAAAATATATTTCATTTAAATACTACTTTTTGCCCTT  600

seq1  TGAACCTAACTACTTCAAGAACACAACAAAATGATGCCAACATTTTCTTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTAACTACTTCAAGAACACAACAAAATGATGCCAACATTTTCTTT  650

seq1  TTTCTTTACAAACAGATCTAACCTCTCTTCTGCTTAAAACACTGCAGGTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTACAAACAGATCTAACCTCTCTTCTGCTTAAAACACTGCAGGTT  700

seq1  TTCCATCTACAGATATATTTTATAACGGTTCTATGGACCAAACCCTGGGC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTACAGATATATTTTATAACGGTTCTATGGACCAAACCCTGGGC  750

seq1  TTTGTGCATGCTAAATAAACCCTTCACTAGTGAGCTACATCTCCAGCCCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCATGCTAAATAAACCCTTCACTAGTGAGCTACATCTCCAGCCCC  800

seq1  TCTACCACTATTTTGGGTAGTAATTTCTTTGTTTTTCTGACATGCATGTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCACTATTTTGGGTAGTAATTTCTTTGTTTTTCTGACATGCATGTG  850

seq1  AATCTTTGGGATCTATAGCTACTATAAATCAAATAGAGGTATTCTACGCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTGGGATCTATAGCTACTATAAATCAAATAGAGGTATTCTACGCT  900

seq1  ATTTTCTTTCTCTGATTATGTTCATGAATTC  925
      |||||||||||||||||||||||||||||||
seq2  ATTTTCTTTCTCTGATTATGTTCATGAATTC  931


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