gaattcatcatctgattcagagctaccaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatatttcctctttgttcctactctctctccc
cactttacttctgatagcttgtcctgaatttcatctagaatccgccctgc
cttaaccacttgataacatgtgaaaaggaacaaaagggcttctaacatta
gaaaaaattcaaggccaaacatattccactttacttctgatagactgtct
tgaatttccttagaaagttcaaggccaggcttacctcgtaaagctatact
cactggtactctcgttccccagctgaaaagttctgaattcatgcagttga
atccttcttaacagtctgctttacgggaacctttattaccgcgacccgca
gttctggttctggaatgagggatcttccttgcgccagtcccgagtttttt
ctcgtcccggaatttctcgtcccggaattcggcaccaattgttattaacg
cgttctcacgcccggccaggaagaacacagcaaaccagaatcttctgcgg
caaaactttattgcttacatcttcaggagcaagagtgtaagaagcaagag
agagagaaaacgaaaccccgtccctattaaggagaattatccttcgccta
gaacgtgtcactccctgattggctgcagcccatcggccgagttgacgtca
cggggaaaggcagagcacatggagtggaggaccaccctcggcacatgcgc
agattatttgtttaccacttagaacacagctgtcagcgccatcttgtaac
ggcgaatgtggcgcggctcccaacaggaacctatatcaattcactcaagt
tatttcccacttccccttcgatgagatttagtgtgtctagttttattttg
aggtccttaatgaacctggacttgagttttgtgtaagggtgaataaaata
tgcctcctagttcaattctctaccatgtagacattccagttgaagatgct
ttccattatttccatgtggaatgactctcaacaaaaatcagggtgatatg
ggttctggtgagagatatatttctct

gaattctgcctgttgtcatctgccttggtctgttctgatttccatgaaca
tatgaacactcccaaaggatttaatagagaaacctacacaccgttaactt
atactgtattaccatttttcacatattatgtgctattgtgttgcagaatg
cttttgttctgtataatatgtgctttctgtgccctatgtgtcttgagtat
ggtagttttttagtgattattggatgtgcaaattgttcagttgcctaata
aataacatcttagtgatattttctttgagaagctctgccaaacttcatct
ggaccaccattaactagagaaaatacactattgagtgaccccagaaaaga
ctgactgagaaattggaattgctggaggccactgttagtgggagaaatga
aggaaatgaataagctacaccacaggatttgagttagaacaatgataaac
atcgaaaaatattatctctgggttgtggaaagacaaaatgagaaggatta
gggactcagtattcaaattaaatataacagcattagctatactaaataaa
gctcccatgaaccatgcttttcagagacacattccatatctatgacaact
tccatagtgcaactgttcttataatttgactggctattgcagtacatgta
cgcactctgtgctaaaaatttaagcctacatccgctttgggcgacatgct
ggtcatctgtcttttaacacagggaaaggctgttctccacaggggtctga
ttaatagatgcagtgaccactttgcactgctcattgttttctgtggtgca
tcttttaggagcacagtgtgcaaagtgggaagtacagtcatctctttaga
gtcatgaaaagcatttcattttgaaacagtaataaccaagcagctctaag
tggcttgattccaaacactcaacacagatgaaagtgcgacttactttcat
tatgtggaaatgtcatacaagaacatctgagctaaggcgtggtgcatgtg
ctttgttctaccactgttgggatgggcagactggtcatctacatgagaac
cactttgttgtattttggccatgctcattattgctattgtaaaagcaaac
aaaaaatcaacaacaggcaaa

seq1: chr8_5784726_5785131
seq2: B6Ng01-324M17.b_757_1272

seq1  TTGCTTACATCTTCAGGAGCAAGAGAGCAAGATCAAGAGCAAGAGCAAGA  50
      ||||||||||||||||||||||||| | ||||                  
seq2  TTGCTTACATCTTCAGGAGCAAGAGTGTAAGA------------------  32

seq1  GCAAGAGAGCAAGAGCAAGAGCAAGAGAGCAAGAGAGAGAATGGCAAAAC  100
                         ||||||||    ||||||| ||   | ||||
seq2  -------------------AGCAAGAG----AGAGAGAAAA---CGAAAC  56

seq1  CCCGTCCCTTTTAAGGAGAATTATCCTCCGCCTAGGACGTGTCGCTCCCT  150
      ||||||||| ||||||||||||||||| ||||||| ||||||| ||||||
seq2  CCCGTCCCTATTAAGGAGAATTATCCTTCGCCTAGAACGTGTCACTCCCT  106

seq1  GATTGGCTGCAGCCCATCGGCCGAGTTGTCGTCACGGGG-AAGGCAGAGC  199
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  GATTGGCTGCAGCCCATCGGCCGAGTTGACGTCACGGGGAAAGGCAGAGC  156

seq1  ACATGGAGTGGAGAACTACCCTTGGCACATGCGCAGATTATTTGTTTACC  249
      ||||||||||||| || ||||| |||||||||||||||||||||||||||
seq2  ACATGGAGTGGAGGACCACCCTCGGCACATGCGCAGATTATTTGTTTACC  206

seq1  ACTTAGAACACAGGATGTCAGCGCCATCTTGTAACAGCGAATGTGAGGGC  299
      |||||||||||| | |||||||||||||||||||| ||||||||| | ||
seq2  ACTTAGAACACA-GCTGTCAGCGCCATCTTGTAACGGCGAATGTG-GCGC  254

seq1  GGCTCCCCACAATGATGGAAGC----------------AGAGCTTT----  329
      ||||||| |||     |||| |                ||   |||    
seq2  GGCTCCCAACA-----GGAACCTATATCAATTCACTCAAGTTATTTCCCA  299

seq1  ------CATCCATGTGCTTAA-------TAG--------TGAAATCCTTG  358
            | || ||| | || |       |||        |||  ||||| 
seq2  CTTCCCCTTCGATGAGATTTAGTGTGTCTAGTTTTATTTTGAGGTCCTTA  349

seq1  ATGATATCATAGA----AGTCTACT-TACACGTACATAGAGATAT-----  398
      |||  | | | ||    ||| |  | ||   ||  ||| | ||||     
seq2  ATG--AACCTGGACTTGAGTTTTGTGTAAGGGTGAATA-AAATATGCCTC  396

seq1  -------ATTTCTCT-----------------------------------  406
             | ||||||                                   
seq2  CTAGTTCAATTCTCTACCATGTAGACATTCCAGTTGAAGATGCTTTCCAT  446

seq1  --------------------------------------------------  406
                                                        
seq2  TATTTCCATGTGGAATGACTCTCAACAAAAATCAGGGTGATATGGGTTCT  496

seq1  --------------------  406
                          
seq2  GGTGAGAGATATATTTCTCT  516

seq1: chr1_5939796_5940914
seq2: B6Ng01-324M17.g_64_1184 (reverse)

seq1  TTTGCTTGTTGTTGGATTTTTTGTTTTGTTTTTACAAATAGC-ATAATGA  49
      ||||| ||||||| ||||||||| |||| |||||| |||||| |||||||
seq2  TTTGCCTGTTGTT-GATTTTTTG-TTTGCTTTTAC-AATAGCAATAATGA  47

seq1  AGGCATGGGCAAAATACAAC-AAGTGG-TCTCATGTAGATGA-CAGTCTG  96
        |||||| ||||||||||| |||||| |||||||||||||| |||||||
seq2  --GCATGGCCAAAATACAACAAAGTGGTTCTCATGTAGATGACCAGTCTG  95

seq1  -CCATCCCAACAGTGGTAGAACAAAAGCACATGCA-CACGCCTTAGCTCA  144
       ||||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  CCCATCCCAACAGTGGTAGAAC-AAAGCACATGCACCACGCCTTAGCTCA  144

seq1  GATGTTCTTGTATGACATTT-CACATAATG-AAGTAAGTCGCACTTTCAT  192
      |||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  GATGTTCTTGTATGACATTTCCACATAATGAAAGTAAGTCGCACTTTCAT  194

seq1  CTGTGTTGAGTGTTTGGAATCAAGCCACTTAGAGCTGCTTGGTTATTACT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTGAGTGTTTGGAATCAAGCCACTTAGAGCTGCTTGGTTATTACT  244

seq1  GTTTCAAAATGAAATGCTTTTCATGACTCTAAAGAGATGACTGTACTTCC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAAAATGAAATGCTTTTCATGACTCTAAAGAGATGACTGTACTTCC  294

seq1  CACTTTGCACACTGTGCTCCTAAAAGATGCACCACAGAAAACAATGAGCA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGCACACTGTGCTCCTAAAAGATGCACCACAGAAAACAATGAGCA  344

seq1  GTGCAAAGTGGTCACTGCATCTATTAATCAGACCCCTGTGGAGAACAGCC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAAGTGGTCACTGCATCTATTAATCAGACCCCTGTGGAGAACAGCC  394

seq1  TTTCCCTGTGTTAAAAGACAGATGACCAGCATGTCGCCCAAAGCGGATGT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTGTGTTAAAAGACAGATGACCAGCATGTCGCCCAAAGCGGATGT  444

seq1  AGGCTTAAATTTTTAGCACAGAGTGCGTACATGTACTGCAATAGCCAGTC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTAAATTTTTAGCACAGAGTGCGTACATGTACTGCAATAGCCAGTC  494

seq1  AAATTATAAGAACAGTTGCACTATGGAAGTTGTCATAGATATGGAATGTG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATAAGAACAGTTGCACTATGGAAGTTGTCATAGATATGGAATGTG  544

seq1  TCTCTGAAAAGCATGGTTCATGGGAGCTTTATTTAGTATAGCTAATGCTG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAAAAGCATGGTTCATGGGAGCTTTATTTAGTATAGCTAATGCTG  594

seq1  TTATATTTAATTTGAATACTGAGTCCCTAATCCTTCTCATTTTGTCTTTC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTAATTTGAATACTGAGTCCCTAATCCTTCTCATTTTGTCTTTC  644

seq1  CACAACCCAGAGATAATATTTTTCGATGTTTATCATTGTTCTAACTCAAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCCAGAGATAATATTTTTCGATGTTTATCATTGTTCTAACTCAAA  694

seq1  TCCTGTGGTGTAGCTTATTCATTTCCTTCATTTCTCCCACTAACAGTGGC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGGTGTAGCTTATTCATTTCCTTCATTTCTCCCACTAACAGTGGC  744

seq1  CTCCAGCAATTCCAATTTCTCAGTCAGTCTTTTCTGGGGTCACTCAATAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCAATTCCAATTTCTCAGTCAGTCTTTTCTGGGGTCACTCAATAG  794

seq1  TGTATTTTCTCTAGTTAATGGTGGTCCAGATGAAGTTTGGCAGAGCTTCT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTCTCTAGTTAATGGTGGTCCAGATGAAGTTTGGCAGAGCTTCT  844

seq1  CAAAGAAAATATCACTAAGATGTTATTTATTAGGCAACTGAACAATTTGC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAAATATCACTAAGATGTTATTTATTAGGCAACTGAACAATTTGC  894

seq1  ACATCCAATAATCACTAAAAAACTACCATACTCAAGACACATAGGGCACA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAATAATCACTAAAAAACTACCATACTCAAGACACATAGGGCACA  944

seq1  GAAAGCACATATTATACAGAACAAAAGCATTCTGCAACACAATAGCACAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCACATATTATACAGAACAAAAGCATTCTGCAACACAATAGCACAT  994

seq1  AATATGTGAAAAATGGTAATACAGTATAAGTTAACGGTGTGTAGGTTTCT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTGAAAAATGGTAATACAGTATAAGTTAACGGTGTGTAGGTTTCT  1044

seq1  CTATTAAATCCTTTGGGAGTGTTCATATGTTCATGGAAATCAGAACAGAC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAATCCTTTGGGAGTGTTCATATGTTCATGGAAATCAGAACAGAC  1094

seq1  CAAGGCAGATGACAACAGGCAGAATTC  1119
      |||||||||||||||||||||||||||
seq2  CAAGGCAGATGACAACAGGCAGAATTC  1121